RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 TACC1O75410 805 aa8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 XRCC5P13010 732 aaKnown RBP8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 ALAS1P13196 640 aa8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 UCHL3P15374 230 aa8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 USP14P54578 494 aa8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 EPHA7Q15375 998 aa8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 NFRKBQ6P4R8 1299 aa8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 MAEAQ7L5Y9 396 aa8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 IRF2BP2Q7Z5L9 587 aa8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 CREG2Q8IUH2 290 aa8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 PRPF38AQ8NAV1 312 aaKnown RBP8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 RBM46Q8TBY0 533 aaKnown RBP8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 BORCS6Q96GS4 357 aa8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 NACC1Q96RE7 527 aa8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 SH2D3AQ9BRG2 576 aa8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 TEKT3Q9BXF9 490 aa8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 PARVGQ9HBI0 331 aa8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 AIPL1Q9NZN9 384 aa8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 L1RE1Q9UN81 338 aa8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 FZD1Q9UP38 647 aa8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 BRCA1P38398 1863 aaKnown RBP8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 FRMPD4Q14CM0 1322 aa8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 POTEB2H3BUK9 544 aa8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 POLR3GO15318 223 aaPredicted RBP8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 DHX15O43143 795 aaKnown RBP8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 GAP43P17677 238 aa8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 BAG6P46379 1132 aa8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 MRPS9P82933 396 aaKnown RBP8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 GABPB1Q06547 395 aaPredicted RBP8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 C2orf54Q08AI8 447 aa8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 ITGB3BPQ13352 177 aaPredicted RBP8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 EXOC3L4Q17RC7 722 aa8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 KLHDC7AQ5VTJ3 777 aa8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 ARHGAP27Q6ZUM4 889 aa8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 ZNF720Q7Z2F6 126 aa8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 DAW1Q8N136 415 aa8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 WNK4Q96J92 1243 aa8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 NUCKS1Q9H1E3 243 aaKnown RBP8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 DEFB129Q9H1M3 183 aa8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 TAOK3Q9H2K8 898 aa8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 EHMT1Q9H9B1 1298 aa8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 SIX2Q9NPC8 291 aa8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 LOXHD1Q8IVV2 1947 aa8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 RPTORQ8N122 1335 aa8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 KLRC1P26715 233 aa8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 ZNF131P52739 623 aa8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 PTK2Q05397 1052 aa8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 KLHL30Q0D2K2 578 aa8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 MAPK7Q13164 816 aa8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 PLS1Q14651 629 aa8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 SMC1AQ14683 1233 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 SKIV2LQ15477 1246 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 SLC18A3Q16572 532 aa8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 CAGE1Q8TC20 777 aa8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 JDP2Q8WYK2 163 aa8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 TAAR1Q96RJ0 339 aa8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 PPP1R1BQ9UD71 204 aaPredicted RBP8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 COL11A1P12107 1806 aaPredicted RBP8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 PARP14Q460N5 1801 aa8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 TMEM150BA6NC51 233 aa8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 EIF3DO15371 548 aaKnown RBP eCLIP8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 FLOT1O75955 427 aa8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 EPB41P11171 864 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 TUBB4BP68371 445 aa8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 MRPS25P82663 173 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 SPP2Q13103 211 aa8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 MTMR2Q13614 643 aa8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 ASIC2Q16515 512 aa8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 TBC1D10BQ4KMP7 808 aaPredicted RBP8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 DALRD3Q5D0E6 543 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 ODR4Q5SWX8 454 aa8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 NBPF12Q5TAG4 269 aaPredicted RBP8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 TRMT1LQ7Z2T5 733 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 ZNF571Q7Z3V5 609 aaPredicted RBP8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 OSBPL9Q96SU4 736 aa8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 TLR10Q9BXR5 811 aa8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 H3BQF6 201 aa8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 IRF6O14896 467 aa8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 WDR46O15213 610 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 HIP1RO75146 1068 aa8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 EIF2AK2P19525 551 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 RPL13P26373 211 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 OAS2P29728 719 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 CYP2J2P51589 502 aa8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 SF3B2Q13435 895 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 TKFCQ3LXA3 575 aa8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 PRAMEF18Q5VWM3 479 aa8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 WDR93Q6P2C0 686 aa8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 MIER3Q7Z3K6 550 aa8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 FAM178BQ8IXR5 827 aa8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 SYTL5Q8TDW5 730 aaPredicted RBP8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 SLC16A10Q8TF71 515 aa8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 RIT2Q99578 217 aa8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 KIAA1683Q9H0B3 1180 aa8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 SLC38A10Q9HBR0 1119 aa8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 PLCB1Q9NQ66 1216 aa8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 TMEM51Q9NW97 253 aa8.72□□□□□ -1.01
PDLIM5-204ENST00000380176 WDR81Q562E7 1941 aa8.71□□□□□ -1.01
PDLIM5-204ENST00000380176 TISP43B9A030 160 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms