RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 SLC35C1Q96A29 364 aa16.28■□□□□ 0.2
PRNP-201ENST00000379440 ODF2LQ9ULJ1 636 aa16.28■□□□□ 0.2
PRNP-201ENST00000379440 CAPN6Q9Y6Q1 641 aa16.28■□□□□ 0.2
PRNP-201ENST00000379440 SSU72P8A0A1W2PR75 194 aa16.28■□□□□ 0.2
PRNP-201ENST00000379440 USO1O60763 962 aaKnown RBP16.28■□□□□ 0.2
PRNP-201ENST00000379440 MOCS3O95396 460 aa16.28■□□□□ 0.2
PRNP-201ENST00000379440 CCDC172P0C7W6 258 aa16.28■□□□□ 0.2
PRNP-201ENST00000379440 BAATQ14032 418 aaPredicted RBP16.28■□□□□ 0.2
PRNP-201ENST00000379440 NBPF20Q3BBV1 942 aa16.28■□□□□ 0.2
PRNP-201ENST00000379440 TMCO3Q6UWJ1 677 aa16.28■□□□□ 0.2
PRNP-201ENST00000379440 PDCD2LQ9BRP1 358 aa16.28■□□□□ 0.2
PRNP-201ENST00000379440 TSGA10Q9BZW7 698 aa16.28■□□□□ 0.2
PRNP-201ENST00000379440 ANKZF1Q9H8Y5 726 aa16.28■□□□□ 0.2
PRNP-201ENST00000379440 PXMP2Q9NR77 195 aa16.28■□□□□ 0.2
PRNP-201ENST00000379440 RNF146Q9NTX7 359 aa16.28■□□□□ 0.2
PRNP-201ENST00000379440 SALL4Q9UJQ4 1053 aa16.28■□□□□ 0.2
PRNP-201ENST00000379440 SAR1BQ9Y6B6 198 aa16.28■□□□□ 0.2
PRNP-201ENST00000379440 CTAGE15A4D2H0 777 aa16.27■□□□□ 0.2
PRNP-201ENST00000379440 SLC16A3O15427 465 aaKnown RBP16.27■□□□□ 0.2
PRNP-201ENST00000379440 SERPING1P05155 500 aa16.27■□□□□ 0.2
PRNP-201ENST00000379440 CTAGE8P0CG41 777 aa16.27■□□□□ 0.2
PRNP-201ENST00000379440 GUCY2CP25092 1073 aa16.27■□□□□ 0.2
PRNP-201ENST00000379440 PON1P27169 355 aa16.27■□□□□ 0.2
PRNP-201ENST00000379440 PRKG1Q13976 671 aa16.27■□□□□ 0.2
PRNP-201ENST00000379440 ARHGEF16Q5VV41 709 aa16.27■□□□□ 0.2
PRNP-201ENST00000379440 PAPD7Q5XG87 772 aaKnown RBP16.27■□□□□ 0.2
PRNP-201ENST00000379440 ARHGAP27Q6ZUM4 889 aa16.27■□□□□ 0.2
PRNP-201ENST00000379440 CTAGE6Q86UF2 777 aa16.27■□□□□ 0.2
PRNP-201ENST00000379440 CTAGE4Q8IX94 777 aa16.27■□□□□ 0.2
PRNP-201ENST00000379440 SYN2Q92777 582 aaPredicted RBP16.27■□□□□ 0.2
PRNP-201ENST00000379440 CAPZA3Q96KX2 299 aa16.27■□□□□ 0.2
PRNP-201ENST00000379440 NUCKS1Q9H1E3 243 aaKnown RBP16.27■□□□□ 0.2
PRNP-201ENST00000379440 METTL14Q9HCE5 456 aaKnown RBP16.27■□□□□ 0.2
PRNP-201ENST00000379440 KCND2Q9NZV8 630 aa16.27■□□□□ 0.2
PRNP-201ENST00000379440 SEL1LQ9UBV2 794 aa16.27■□□□□ 0.2
PRNP-201ENST00000379440 TESPA1A2RU30 521 aaPredicted RBP16.27■□□□□ 0.19
PRNP-201ENST00000379440 NOP2P46087 812 aaKnown RBP16.27■□□□□ 0.19
PRNP-201ENST00000379440 UGCGQ16739 394 aa16.27■□□□□ 0.19
PRNP-201ENST00000379440 EXOC3L4Q17RC7 722 aa16.27■□□□□ 0.19
PRNP-201ENST00000379440 NOA1Q8NC60 698 aaKnown RBP16.27■□□□□ 0.19
PRNP-201ENST00000379440 NEK9Q8TD19 979 aa16.27■□□□□ 0.19
PRNP-201ENST00000379440 BORCS6Q96GS4 357 aa16.27■□□□□ 0.19
PRNP-201ENST00000379440 DRC1Q96MC2 740 aa16.27■□□□□ 0.19
PRNP-201ENST00000379440 AS3MTQ9HBK9 375 aa16.27■□□□□ 0.19
PRNP-201ENST00000379440 MAP3K20Q9NYL2 800 aaKnown RBP16.27■□□□□ 0.19
PRNP-201ENST00000379440 GGA3Q9NZ52 723 aa16.27■□□□□ 0.19
PRNP-201ENST00000379440 FHOD1Q9Y613 1164 aa16.27■□□□□ 0.19
PRNP-201ENST00000379440 ZRANB2O95218 330 aaKnown RBP eCLIP16.26■□□□□ 0.19
PRNP-201ENST00000379440 RHOXF2BP0C7M4 288 aa16.26■□□□□ 0.19
PRNP-201ENST00000379440 CYP2J2P51589 502 aa16.26■□□□□ 0.19
PRNP-201ENST00000379440 SATB1Q01826 763 aa16.26■□□□□ 0.19
PRNP-201ENST00000379440 KLHDC7AQ5VTJ3 777 aa16.26■□□□□ 0.19
PRNP-201ENST00000379440 CCDC125Q86Z20 511 aa16.26■□□□□ 0.19
PRNP-201ENST00000379440 FAM186BQ8IYM0 893 aa16.26■□□□□ 0.19
PRNP-201ENST00000379440 RHOXF2Q9BQY4 288 aa16.26■□□□□ 0.19
PRNP-201ENST00000379440 ERICH4A6NGS2 130 aa16.26■□□□□ 0.19
PRNP-201ENST00000379440 ZNF185O15231 689 aa16.26■□□□□ 0.19
PRNP-201ENST00000379440 UCHL3P15374 230 aa16.26■□□□□ 0.19
PRNP-201ENST00000379440 QARSP47897 775 aaKnown RBP16.26■□□□□ 0.19
PRNP-201ENST00000379440 RARRES1P49788 294 aa16.26■□□□□ 0.19
PRNP-201ENST00000379440 HIRAP54198 1017 aaPredicted RBP16.26■□□□□ 0.19
PRNP-201ENST00000379440 SNRNP48Q6IEG0 339 aaKnown RBP16.26■□□□□ 0.19
PRNP-201ENST00000379440 DLK2Q6UY11 383 aa16.26■□□□□ 0.19
PRNP-201ENST00000379440 MMS19Q96T76 1030 aa16.26■□□□□ 0.19
PRNP-201ENST00000379440 AGPAT3Q9NRZ7 376 aa16.26■□□□□ 0.19
PRNP-201ENST00000379440 TBC1D22BQ9NU19 505 aa16.26■□□□□ 0.19
PRNP-201ENST00000379440 AIPL1Q9NZN9 384 aa16.26■□□□□ 0.19
PRNP-201ENST00000379440 DOCK1Q14185 1865 aa16.26■□□□□ 0.19
PRNP-201ENST00000379440 CCNE2O96020 404 aa16.25■□□□□ 0.19
PRNP-201ENST00000379440 PSMC2P35998 433 aaKnown RBP16.25■□□□□ 0.19
PRNP-201ENST00000379440 CC2D1AQ6P1N0 951 aaPredicted RBP16.25■□□□□ 0.19
PRNP-201ENST00000379440 GJB7Q6PEY0 223 aa16.25■□□□□ 0.19
PRNP-201ENST00000379440 APOBEC3FQ8IUX4 373 aaKnown RBP16.25■□□□□ 0.19
PRNP-201ENST00000379440 REPS2Q8NFH8 660 aa16.25■□□□□ 0.19
PRNP-201ENST00000379440 FBXO41Q8TF61 875 aa16.25■□□□□ 0.19
PRNP-201ENST00000379440 PNKPQ96T60 521 aa16.25■□□□□ 0.19
PRNP-201ENST00000379440 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.25■□□□□ 0.19
PRNP-201ENST00000379440 GBP3Q9H0R5 595 aa16.25■□□□□ 0.19
PRNP-201ENST00000379440 FAM53CQ9NYF3 392 aa16.25■□□□□ 0.19
PRNP-201ENST00000379440 AJAP1Q9UKB5 411 aaPredicted RBP16.25■□□□□ 0.19
PRNP-201ENST00000379440 KLHL30Q0D2K2 578 aa16.25■□□□□ 0.19
PRNP-201ENST00000379440 ASIC2Q16515 512 aa16.25■□□□□ 0.19
PRNP-201ENST00000379440 KLRG1Q96E93 195 aa16.25■□□□□ 0.19
PRNP-201ENST00000379440 PLCB1Q9NQ66 1216 aa16.25■□□□□ 0.19
PRNP-201ENST00000379440 GPRC5DQ9NZD1 345 aa16.25■□□□□ 0.19
PRNP-201ENST00000379440 ADAMTS1Q9UHI8 967 aa16.25■□□□□ 0.19
PRNP-201ENST00000379440 A0A087X0T9 212 aa16.24■□□□□ 0.19
PRNP-201ENST00000379440 K7ENM7 598 aa16.24■□□□□ 0.19
PRNP-201ENST00000379440 TACC1O75410 805 aa16.24■□□□□ 0.19
PRNP-201ENST00000379440 FAM228BP0C875 321 aa16.24■□□□□ 0.19
PRNP-201ENST00000379440 PNMA6AP0CW24 399 aaPredicted RBP16.24■□□□□ 0.19
PRNP-201ENST00000379440 YWHABP31946 246 aaKnown RBP16.24■□□□□ 0.19
PRNP-201ENST00000379440 DSG3P32926 999 aa16.24■□□□□ 0.19
PRNP-201ENST00000379440 BMS1Q14692 1282 aaKnown RBP16.24■□□□□ 0.19
PRNP-201ENST00000379440 HS2ST1Q7LGA3 356 aa16.24■□□□□ 0.19
PRNP-201ENST00000379440 SYCP3Q8IZU3 236 aa16.24■□□□□ 0.19
PRNP-201ENST00000379440 RDH13Q8NBN7 331 aa16.24■□□□□ 0.19
PRNP-201ENST00000379440 SPAG5Q96R06 1193 aa16.24■□□□□ 0.19
PRNP-201ENST00000379440 STRA6Q9BX79 667 aa16.24■□□□□ 0.19
PRNP-201ENST00000379440 SIX2Q9NPC8 291 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms