RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 COG5Q9UP83 839 aa27.75■■■□□ 2.03
TNFRSF4-201ENST00000379236 NOC2LQ9Y3T9 749 aaKnown RBP27.75■■■□□ 2.03
TNFRSF4-201ENST00000379236 FOSBP53539 338 aa27.74■■■□□ 2.03
TNFRSF4-201ENST00000379236 MTERF2Q49AM1 385 aa27.74■■■□□ 2.03
TNFRSF4-201ENST00000379236 ZNF710Q8N1W2 664 aa27.74■■■□□ 2.03
TNFRSF4-201ENST00000379236 LRRC71Q8N4P6 559 aa27.74■■■□□ 2.03
TNFRSF4-201ENST00000379236 NSUN7Q8NE18 718 aaKnown RBP27.74■■■□□ 2.03
TNFRSF4-201ENST00000379236 CDHR5Q9HBB8 845 aa27.74■■■□□ 2.03
TNFRSF4-201ENST00000379236 TCF20Q9UGU0 1960 aaKnown RBP27.73■■■□□ 2.03
TNFRSF4-201ENST00000379236 FDPSP14324 419 aaKnown RBP27.73■■■□□ 2.03
TNFRSF4-201ENST00000379236 XKR3Q5GH77 459 aa27.73■■■□□ 2.03
TNFRSF4-201ENST00000379236 ERVK-5Q9HDB9 667 aa27.73■■■□□ 2.03
TNFRSF4-201ENST00000379236 ST3GAL5Q9UNP4 418 aa27.73■■■□□ 2.03
TNFRSF4-201ENST00000379236 H3BNC9 293 aa27.72■■■□□ 2.03
TNFRSF4-201ENST00000379236 DKC1O60832 514 aaKnown RBP eCLIP27.72■■■□□ 2.03
TNFRSF4-201ENST00000379236 DGKIO75912 1065 aa27.72■■■□□ 2.03
TNFRSF4-201ENST00000379236 BAG4O95429 457 aaKnown RBP27.72■■■□□ 2.03
TNFRSF4-201ENST00000379236 RTN4RL1Q86UN2 441 aaPredicted RBP27.72■■■□□ 2.03
TNFRSF4-201ENST00000379236 BANK1Q8NDB2 785 aa27.72■■■□□ 2.03
TNFRSF4-201ENST00000379236 HLA-CQ95604 372 aa27.72■■■□□ 2.03
TNFRSF4-201ENST00000379236 VCANP13611 3396 aa27.72■■■□□ 2.03
TNFRSF4-201ENST00000379236 TBX3O15119 743 aa27.71■■■□□ 2.03
TNFRSF4-201ENST00000379236 JAK2O60674 1132 aa27.71■■■□□ 2.03
TNFRSF4-201ENST00000379236 NLRP11P59045 1033 aaKnown RBP27.71■■■□□ 2.03
TNFRSF4-201ENST00000379236 PSMC5P62195 406 aa27.71■■■□□ 2.03
TNFRSF4-201ENST00000379236 NR5A1Q13285 461 aa27.71■■■□□ 2.03
TNFRSF4-201ENST00000379236 TMEM40Q8WWA1 233 aa27.71■■■□□ 2.03
TNFRSF4-201ENST00000379236 TMX1Q9H3N1 280 aa27.71■■■□□ 2.03
TNFRSF4-201ENST00000379236 C1orf112Q9NSG2 853 aa27.71■■■□□ 2.03
TNFRSF4-201ENST00000379236 LIMCH1Q9UPQ0 1083 aa27.71■■■□□ 2.03
TNFRSF4-201ENST00000379236 PCDHB7Q9Y5E2 793 aa27.71■■■□□ 2.03
TNFRSF4-201ENST00000379236 FNDC1Q4ZHG4 1894 aaPredicted RBP27.7■■■□□ 2.03
TNFRSF4-201ENST00000379236 DDX11L8A8MPP1 907 aa27.7■■■□□ 2.02
TNFRSF4-201ENST00000379236 GPR32O75388 356 aa27.7■■■□□ 2.02
TNFRSF4-201ENST00000379236 SARSP49591 514 aaKnown RBP27.7■■■□□ 2.02
TNFRSF4-201ENST00000379236 DNM2P50570 870 aa27.7■■■□□ 2.02
TNFRSF4-201ENST00000379236 PPP2R5CQ13362 524 aa27.7■■■□□ 2.02
TNFRSF4-201ENST00000379236 B3GNT9Q6UX72 402 aa27.7■■■□□ 2.02
TNFRSF4-201ENST00000379236 CMTR2Q8IYT2 770 aaKnown RBP27.7■■■□□ 2.02
TNFRSF4-201ENST00000379236 ZNF689Q96CS4 500 aaPredicted RBP27.7■■■□□ 2.02
TNFRSF4-201ENST00000379236 MRPL38Q96DV4 380 aaKnown RBP27.7■■■□□ 2.02
TNFRSF4-201ENST00000379236 ADAM2Q99965 735 aa27.7■■■□□ 2.02
TNFRSF4-201ENST00000379236 C11orf84Q9BUA3 381 aaPredicted RBP27.7■■■□□ 2.02
TNFRSF4-201ENST00000379236 KCNMB3Q9NPA1 279 aa27.7■■■□□ 2.02
TNFRSF4-201ENST00000379236 MMP1P03956 469 aa27.69■■■□□ 2.02
TNFRSF4-201ENST00000379236 RB1P06400 928 aa27.69■■■□□ 2.02
TNFRSF4-201ENST00000379236 TFF2Q03403 129 aa27.69■■■□□ 2.02
TNFRSF4-201ENST00000379236 PAN2Q504Q3 1202 aaKnown RBP27.69■■■□□ 2.02
TNFRSF4-201ENST00000379236 TIGD5Q53EQ6 642 aa27.69■■■□□ 2.02
TNFRSF4-201ENST00000379236 FAM228AQ86W67 206 aa27.69■■■□□ 2.02
TNFRSF4-201ENST00000379236 POTEDQ86YR6 584 aa27.69■■■□□ 2.02
TNFRSF4-201ENST00000379236 SLFN12Q8IYM2 578 aa27.69■■■□□ 2.02
TNFRSF4-201ENST00000379236 NLRP7Q8WX94 980 aa27.69■■■□□ 2.02
TNFRSF4-201ENST00000379236 NIFKQ9BYG3 293 aaKnown RBP27.69■■■□□ 2.02
TNFRSF4-201ENST00000379236 RC3H2Q9HBD1 1191 aaKnown RBP27.69■■■□□ 2.02
TNFRSF4-201ENST00000379236 BMPR1AP36894 532 aa27.68■■■□□ 2.02
TNFRSF4-201ENST00000379236 QARSP47897 775 aaKnown RBP27.68■■■□□ 2.02
TNFRSF4-201ENST00000379236 SAFBQ15424 915 aaKnown RBP eCLIP27.68■■■□□ 2.02
TNFRSF4-201ENST00000379236 NCAPH2Q6IBW4 605 aa27.68■■■□□ 2.02
TNFRSF4-201ENST00000379236 SLC24A5Q71RS6 500 aa27.68■■■□□ 2.02
TNFRSF4-201ENST00000379236 CCDC83Q8IWF9 413 aa27.68■■■□□ 2.02
TNFRSF4-201ENST00000379236 DIS3L2Q8IYB7 885 aaKnown RBP27.68■■■□□ 2.02
TNFRSF4-201ENST00000379236 LINC01465Q8N7H1 131 aa27.68■■■□□ 2.02
TNFRSF4-201ENST00000379236 ADAMTS19Q8TE59 1207 aa27.68■■■□□ 2.02
TNFRSF4-201ENST00000379236 JPH2Q9BR39 696 aaPredicted RBP27.68■■■□□ 2.02
TNFRSF4-201ENST00000379236 RGS18Q9NS28 235 aa27.68■■■□□ 2.02
TNFRSF4-201ENST00000379236 VAV3Q9UKW4 847 aa27.68■■■□□ 2.02
TNFRSF4-201ENST00000379236 ARID2Q68CP9 1835 aa27.68■■■□□ 2.02
TNFRSF4-201ENST00000379236 ATG2AQ2TAZ0 1938 aa27.68■■■□□ 2.02
TNFRSF4-201ENST00000379236 FAM205CA6NFA0 338 aa27.67■■■□□ 2.02
TNFRSF4-201ENST00000379236 MGEA5O60502 916 aa27.67■■■□□ 2.02
TNFRSF4-201ENST00000379236 ZSCAN20P17040 1043 aaPredicted RBP27.67■■■□□ 2.02
TNFRSF4-201ENST00000379236 TARBP2Q15633 366 aaKnown RBP27.67■■■□□ 2.02
TNFRSF4-201ENST00000379236 EARS2Q5JPH6 523 aaKnown RBP27.67■■■□□ 2.02
TNFRSF4-201ENST00000379236 ZNF668Q96K58 619 aaPredicted RBP27.67■■■□□ 2.02
TNFRSF4-201ENST00000379236 TMEM150BA6NC51 233 aa27.66■■■□□ 2.02
TNFRSF4-201ENST00000379236 C5orf67F2Z3F1 127 aa27.66■■■□□ 2.02
TNFRSF4-201ENST00000379236 EML1O00423 815 aa27.66■■■□□ 2.02
TNFRSF4-201ENST00000379236 P4HBP07237 508 aaKnown RBP27.66■■■□□ 2.02
TNFRSF4-201ENST00000379236 EIF4BP23588 611 aaKnown RBP27.66■■■□□ 2.02
TNFRSF4-201ENST00000379236 GPC3P51654 580 aa27.66■■■□□ 2.02
TNFRSF4-201ENST00000379236 CDC42EP1Q00587 391 aa27.66■■■□□ 2.02
TNFRSF4-201ENST00000379236 SPOUT1Q5T280 376 aaKnown RBP27.66■■■□□ 2.02
TNFRSF4-201ENST00000379236 CLP1Q92989 425 aaKnown RBP27.66■■■□□ 2.02
TNFRSF4-201ENST00000379236 ZSCAN31Q96LW9 406 aaPredicted RBP27.66■■■□□ 2.02
TNFRSF4-201ENST00000379236 SH2D3AQ9BRG2 576 aa27.66■■■□□ 2.02
TNFRSF4-201ENST00000379236 XIRP2A4UGR9 3374 aa27.65■■■□□ 2.02
TNFRSF4-201ENST00000379236 BTBD18B2RXH4 712 aa27.65■■■□□ 2.02
TNFRSF4-201ENST00000379236 CALCRLQ16602 461 aa27.65■■■□□ 2.02
TNFRSF4-201ENST00000379236 C8orf34Q49A92 452 aa27.65■■■□□ 2.02
TNFRSF4-201ENST00000379236 HAS1Q92839 578 aa27.65■■■□□ 2.02
TNFRSF4-201ENST00000379236 PLVAPQ9BX97 442 aa27.65■■■□□ 2.02
TNFRSF4-201ENST00000379236 LMAN2LQ9H0V9 348 aa27.65■■■□□ 2.02
TNFRSF4-201ENST00000379236 ADAMTS10Q9H324 1103 aa27.65■■■□□ 2.02
TNFRSF4-201ENST00000379236 MRPL42Q9Y6G3 142 aaKnown RBP27.65■■■□□ 2.02
TNFRSF4-201ENST00000379236 SPTBN5Q9NRC6 3674 aaKnown RBP27.64■■■□□ 2.02
TNFRSF4-201ENST00000379236 KCNQ1P51787 676 aa27.64■■■□□ 2.02
TNFRSF4-201ENST00000379236 EPHA7Q15375 998 aa27.64■■■□□ 2.02
TNFRSF4-201ENST00000379236 PLA2G4FQ68DD2 849 aa27.64■■■□□ 2.02
TNFRSF4-201ENST00000379236 TNFRSF25Q93038 417 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms