RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 PLA2G4DQ86XP0 818 aa20.22■□□□□ 0.83
PDLIM4-202ENST00000379018 MRPS27Q92552 414 aaKnown RBP20.22■□□□□ 0.83
PDLIM4-202ENST00000379018 ASIC4Q96FT7 647 aa20.22■□□□□ 0.83
PDLIM4-202ENST00000379018 ZNF668Q96K58 619 aaPredicted RBP20.22■□□□□ 0.83
PDLIM4-202ENST00000379018 TCEANC2Q96MN5 208 aa20.22■□□□□ 0.83
PDLIM4-202ENST00000379018 LSG1Q9H089 658 aaKnown RBP20.22■□□□□ 0.83
PDLIM4-202ENST00000379018 RNF216Q9NWF9 866 aaPredicted RBP20.22■□□□□ 0.83
PDLIM4-202ENST00000379018 TMEM161AQ9NX61 479 aa20.22■□□□□ 0.83
PDLIM4-202ENST00000379018 TCEAL9Q9UHQ7 104 aa20.22■□□□□ 0.83
PDLIM4-202ENST00000379018 PUF60Q9UHX1 559 aaKnown RBP20.22■□□□□ 0.83
PDLIM4-202ENST00000379018 MYH9P35579 1960 aaKnown RBP20.22■□□□□ 0.83
PDLIM4-202ENST00000379018 FSD2A1L4K1 749 aa20.21■□□□□ 0.83
PDLIM4-202ENST00000379018 SMCO2A6NFE2 343 aa20.21■□□□□ 0.83
PDLIM4-202ENST00000379018 MEIS1O00470 390 aa20.21■□□□□ 0.83
PDLIM4-202ENST00000379018 FOSP01100 380 aaPredicted RBP20.21■□□□□ 0.83
PDLIM4-202ENST00000379018 AVPR2P30518 371 aa20.21■□□□□ 0.83
PDLIM4-202ENST00000379018 CLCN3P51790 818 aa20.21■□□□□ 0.83
PDLIM4-202ENST00000379018 ABI1Q8IZP0 508 aa20.21■□□□□ 0.83
PDLIM4-202ENST00000379018 SNX27Q96L92 541 aa20.21■□□□□ 0.83
PDLIM4-202ENST00000379018 V9GY48 417 aaPredicted RBP20.21■□□□□ 0.83
PDLIM4-202ENST00000379018 COL1A2P08123 1366 aa20.21■□□□□ 0.83
PDLIM4-202ENST00000379018 IGKV6D-21A0A0A0MT36 114 aa20.2■□□□□ 0.82
PDLIM4-202ENST00000379018 ZBTB42B2RXF5 422 aa20.2■□□□□ 0.82
PDLIM4-202ENST00000379018 H0Y858 1186 aa20.2■□□□□ 0.82
PDLIM4-202ENST00000379018 ST18O60284 1047 aa20.2■□□□□ 0.82
PDLIM4-202ENST00000379018 SREBF1P36956 1147 aa20.2■□□□□ 0.82
PDLIM4-202ENST00000379018 CRYBB1P53674 252 aaPredicted RBP20.2■□□□□ 0.82
PDLIM4-202ENST00000379018 RTN1Q16799 776 aa20.2■□□□□ 0.82
PDLIM4-202ENST00000379018 PDE12Q6L8Q7 609 aaKnown RBP20.2■□□□□ 0.82
PDLIM4-202ENST00000379018 PPP1R18Q6NYC8 613 aa20.2■□□□□ 0.82
PDLIM4-202ENST00000379018 SYCE2Q6PIF2 218 aa20.2■□□□□ 0.82
PDLIM4-202ENST00000379018 TMC7Q7Z402 723 aa20.2■□□□□ 0.82
PDLIM4-202ENST00000379018 TMEM117Q9H0C3 514 aa20.2■□□□□ 0.82
PDLIM4-202ENST00000379018 S1PR5Q9H228 398 aa20.2■□□□□ 0.82
PDLIM4-202ENST00000379018 ANO2Q9NQ90 1003 aa20.2■□□□□ 0.82
PDLIM4-202ENST00000379018 NAP1L2Q9ULW6 460 aaPredicted RBP20.2■□□□□ 0.82
PDLIM4-202ENST00000379018 AKT3Q9Y243 479 aa20.2■□□□□ 0.82
PDLIM4-202ENST00000379018 CACNA1HO95180 2353 aa20.19■□□□□ 0.82
PDLIM4-202ENST00000379018 FAM86B1E9PN63 330 aa20.19■□□□□ 0.82
PDLIM4-202ENST00000379018 C22orf31O95567 290 aa20.19■□□□□ 0.82
PDLIM4-202ENST00000379018 FAM86B2P0C5J1 330 aa20.19■□□□□ 0.82
PDLIM4-202ENST00000379018 ATP4AP20648 1035 aa20.19■□□□□ 0.82
PDLIM4-202ENST00000379018 IRX6P78412 446 aaPredicted RBP20.19■□□□□ 0.82
PDLIM4-202ENST00000379018 APOA5Q6Q788 366 aa20.19■□□□□ 0.82
PDLIM4-202ENST00000379018 KCNT2Q6UVM3 1135 aa20.19■□□□□ 0.82
PDLIM4-202ENST00000379018 LRRC55Q6ZSA7 311 aa20.19■□□□□ 0.82
PDLIM4-202ENST00000379018 ZNF558Q96NG5 402 aa20.19■□□□□ 0.82
PDLIM4-202ENST00000379018 SCLT1Q96NL6 688 aa20.19■□□□□ 0.82
PDLIM4-202ENST00000379018 RBM28Q9NW13 759 aaKnown RBP20.19■□□□□ 0.82
PDLIM4-202ENST00000379018 MYO10Q9HD67 2058 aa20.18■□□□□ 0.82
PDLIM4-202ENST00000379018 GPR32O75388 356 aa20.18■□□□□ 0.82
PDLIM4-202ENST00000379018 WEE2P0C1S8 567 aa20.18■□□□□ 0.82
PDLIM4-202ENST00000379018 AP3B2Q13367 1082 aa20.18■□□□□ 0.82
PDLIM4-202ENST00000379018 SGMS1Q86VZ5 419 aa20.18■□□□□ 0.82
PDLIM4-202ENST00000379018 LRRC43Q8N309 656 aa20.18■□□□□ 0.82
PDLIM4-202ENST00000379018 KREMEN2Q8NCW0 462 aa20.18■□□□□ 0.82
PDLIM4-202ENST00000379018 CASD1Q96PB1 797 aa20.18■□□□□ 0.82
PDLIM4-202ENST00000379018 ZNF577Q9BSK1 485 aa20.18■□□□□ 0.82
PDLIM4-202ENST00000379018 LZTS1Q9Y250 596 aa20.18■□□□□ 0.82
PDLIM4-202ENST00000379018 USP34Q70CQ2 3546 aa20.18■□□□□ 0.82
PDLIM4-202ENST00000379018 GOLGA8AA7E2F4 631 aa20.17■□□□□ 0.82
PDLIM4-202ENST00000379018 GOLGA8BA8MQT2 603 aa20.17■□□□□ 0.82
PDLIM4-202ENST00000379018 IPO5O00410 1097 aaKnown RBP20.17■□□□□ 0.82
PDLIM4-202ENST00000379018 ZBTB43O43298 467 aa20.17■□□□□ 0.82
PDLIM4-202ENST00000379018 ZSCAN20P17040 1043 aaPredicted RBP20.17■□□□□ 0.82
PDLIM4-202ENST00000379018 NLRP11P59045 1033 aaKnown RBP20.17■□□□□ 0.82
PDLIM4-202ENST00000379018 PLCB3Q01970 1234 aa20.17■□□□□ 0.82
PDLIM4-202ENST00000379018 KRT17Q04695 432 aa20.17■□□□□ 0.82
PDLIM4-202ENST00000379018 DSC3Q14574 896 aa20.17■□□□□ 0.82
PDLIM4-202ENST00000379018 LRRC71Q8N4P6 559 aa20.17■□□□□ 0.82
PDLIM4-202ENST00000379018 BBXQ8WY36 941 aaPredicted RBP20.17■□□□□ 0.82
PDLIM4-202ENST00000379018 RIPOR3Q96MK2 946 aa20.17■□□□□ 0.82
PDLIM4-202ENST00000379018 MAP7D2Q96T17 732 aa20.17■□□□□ 0.82
PDLIM4-202ENST00000379018 ESYT1Q9BSJ8 1104 aa20.17■□□□□ 0.82
PDLIM4-202ENST00000379018 ELAC1Q9H777 363 aaKnown RBP20.17■□□□□ 0.82
PDLIM4-202ENST00000379018 NGRNQ9NPE2 291 aaKnown RBP20.17■□□□□ 0.82
PDLIM4-202ENST00000379018 RNF19AQ9NV58 838 aa20.17■□□□□ 0.82
PDLIM4-202ENST00000379018 GABBR1Q9UBS5 961 aa20.17■□□□□ 0.82
PDLIM4-202ENST00000379018 NR2E1Q9Y466 385 aa20.17■□□□□ 0.82
PDLIM4-202ENST00000379018 SAMM50Q9Y512 469 aa20.17■□□□□ 0.82
PDLIM4-202ENST00000379018 ZFHX2Q9C0A1 2572 aaPredicted RBP20.16■□□□□ 0.82
PDLIM4-202ENST00000379018 C2CD4DB7Z1M9 353 aa20.16■□□□□ 0.82
PDLIM4-202ENST00000379018 DHX15O43143 795 aaKnown RBP20.16■□□□□ 0.82
PDLIM4-202ENST00000379018 HOXA2O43364 376 aa20.16■□□□□ 0.82
PDLIM4-202ENST00000379018 FGFR4P22455 802 aa20.16■□□□□ 0.82
PDLIM4-202ENST00000379018 PPM1AP35813 382 aa20.16■□□□□ 0.82
PDLIM4-202ENST00000379018 METAP2P50579 478 aaKnown RBP eCLIP20.16■□□□□ 0.82
PDLIM4-202ENST00000379018 KCNC3Q14003 757 aa20.16■□□□□ 0.82
PDLIM4-202ENST00000379018 TMEM184AQ6ZMB5 413 aa20.16■□□□□ 0.82
PDLIM4-202ENST00000379018 CASP10Q92851 521 aa20.16■□□□□ 0.82
PDLIM4-202ENST00000379018 SMOC2Q9H3U7 446 aa20.16■□□□□ 0.82
PDLIM4-202ENST00000379018 POMKQ9H5K3 350 aa20.16■□□□□ 0.82
PDLIM4-202ENST00000379018 BARHL2Q9NY43 387 aa20.16■□□□□ 0.82
PDLIM4-202ENST00000379018 SPG21Q9NZD8 308 aa20.16■□□□□ 0.82
PDLIM4-202ENST00000379018 BRPF3Q9ULD4 1205 aa20.16■□□□□ 0.82
PDLIM4-202ENST00000379018 NT5C1B-RDH14C9J2C7 533 aa20.15■□□□□ 0.82
PDLIM4-202ENST00000379018 PSAPP07602 524 aa20.15■□□□□ 0.82
PDLIM4-202ENST00000379018 HOXB8P17481 243 aaPredicted RBP20.15■□□□□ 0.82
PDLIM4-202ENST00000379018 FAM189BP81408 668 aa20.15■□□□□ 0.82
PDLIM4-202ENST00000379018 SMC1AQ14683 1233 aaKnown RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms