RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 PAK2Q13177 524 aa15.37■□□□□ 0.05
SHROOM1-203ENST00000378679 ANKRD36BP1Q96IX9 119 aa15.37■□□□□ 0.05
SHROOM1-203ENST00000378679 SPATA33Q96N06 139 aa15.37■□□□□ 0.05
SHROOM1-203ENST00000378679 KBTBD4Q9NVX7 518 aa15.37■□□□□ 0.05
SHROOM1-203ENST00000378679 A0A1W2PRG0 241 aa15.37■□□□□ 0.05
SHROOM1-203ENST00000378679 CD44P16070 742 aaKnown RBP15.37■□□□□ 0.05
SHROOM1-203ENST00000378679 CD58P19256 250 aa15.37■□□□□ 0.05
SHROOM1-203ENST00000378679 E2F4Q16254 413 aa15.37■□□□□ 0.05
SHROOM1-203ENST00000378679 SLC51AQ86UW1 340 aa15.37■□□□□ 0.05
SHROOM1-203ENST00000378679 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.37■□□□□ 0.05
SHROOM1-203ENST00000378679 HESX1Q9UBX0 185 aa15.37■□□□□ 0.05
SHROOM1-203ENST00000378679 PARP4Q9UKK3 1724 aaKnown RBP15.37■□□□□ 0.05
SHROOM1-203ENST00000378679 TXNP10599 105 aaKnown RBP15.37■□□□□ 0.05
SHROOM1-203ENST00000378679 TCP11Q8WWU5 503 aa15.37■□□□□ 0.05
SHROOM1-203ENST00000378679 MTRQ99707 1265 aa15.37■□□□□ 0.05
SHROOM1-203ENST00000378679 POLR3FQ9H1D9 316 aaPredicted RBP15.37■□□□□ 0.05
SHROOM1-203ENST00000378679 PDE11AQ9HCR9 933 aa15.37■□□□□ 0.05
SHROOM1-203ENST00000378679 PPP1R9AQ9ULJ8 1098 aa15.37■□□□□ 0.05
SHROOM1-203ENST00000378679 CD2APQ9Y5K6 639 aa15.37■□□□□ 0.05
SHROOM1-203ENST00000378679 PHLPP1O60346 1717 aa15.37■□□□□ 0.05
SHROOM1-203ENST00000378679 MED24O75448 989 aa15.36■□□□□ 0.05
SHROOM1-203ENST00000378679 SLC30A10Q6XR72 485 aa15.36■□□□□ 0.05
SHROOM1-203ENST00000378679 CYP2W1Q8TAV3 490 aa15.36■□□□□ 0.05
SHROOM1-203ENST00000378679 RABGGTAQ92696 567 aa15.36■□□□□ 0.05
SHROOM1-203ENST00000378679 CHP1Q99653 195 aa15.36■□□□□ 0.05
SHROOM1-203ENST00000378679 JRKLQ9Y4A0 524 aa15.36■□□□□ 0.05
SHROOM1-203ENST00000378679 THAP12O43422 761 aa15.36■□□□□ 0.05
SHROOM1-203ENST00000378679 GRIN3BO60391 1043 aa15.36■□□□□ 0.05
SHROOM1-203ENST00000378679 ONECUT3O60422 494 aaPredicted RBP15.36■□□□□ 0.05
SHROOM1-203ENST00000378679 ARP10275 920 aa15.36■□□□□ 0.05
SHROOM1-203ENST00000378679 CYP11B2P19099 503 aa15.36■□□□□ 0.05
SHROOM1-203ENST00000378679 POLR2BP30876 1174 aaKnown RBP15.36■□□□□ 0.05
SHROOM1-203ENST00000378679 VAMP7P51809 220 aa15.36■□□□□ 0.05
SHROOM1-203ENST00000378679 ZC2HC1CQ53FD0 456 aaPredicted RBP15.36■□□□□ 0.05
SHROOM1-203ENST00000378679 FKBP1CQ5VVH2 108 aa15.36■□□□□ 0.05
SHROOM1-203ENST00000378679 PLA2G4FQ68DD2 849 aa15.36■□□□□ 0.05
SHROOM1-203ENST00000378679 MYBP10242 640 aa15.36■□□□□ 0.05
SHROOM1-203ENST00000378679 XKR3Q5GH77 459 aa15.36■□□□□ 0.05
SHROOM1-203ENST00000378679 TTC19Q6DKK2 380 aaPredicted RBP15.36■□□□□ 0.05
SHROOM1-203ENST00000378679 ZNF384Q8TF68 577 aa15.36■□□□□ 0.05
SHROOM1-203ENST00000378679 VPS33BQ9H267 617 aa15.36■□□□□ 0.05
SHROOM1-203ENST00000378679 IFNB1P01574 187 aa15.35■□□□□ 0.05
SHROOM1-203ENST00000378679 PNMA6AP0CW24 399 aaPredicted RBP15.35■□□□□ 0.05
SHROOM1-203ENST00000378679 BRD3Q15059 726 aa15.35■□□□□ 0.05
SHROOM1-203ENST00000378679 TAF12Q16514 161 aa15.35■□□□□ 0.05
SHROOM1-203ENST00000378679 RNF34Q969K3 372 aa15.35■□□□□ 0.05
SHROOM1-203ENST00000378679 ADARB2Q9NS39 739 aaKnown RBP15.35■□□□□ 0.05
SHROOM1-203ENST00000378679 PARP2Q9UGN5 583 aa15.35■□□□□ 0.05
SHROOM1-203ENST00000378679 ODF2LQ9ULJ1 636 aa15.35■□□□□ 0.05
SHROOM1-203ENST00000378679 EBAG9O00559 213 aa15.35■□□□□ 0.05
SHROOM1-203ENST00000378679 LDHAP00338 332 aaKnown RBP15.35■□□□□ 0.05
SHROOM1-203ENST00000378679 FGRP09769 529 aa15.35■□□□□ 0.05
SHROOM1-203ENST00000378679 TKFCQ3LXA3 575 aa15.35■□□□□ 0.05
SHROOM1-203ENST00000378679 MOXD1Q6UVY6 613 aa15.35■□□□□ 0.05
SHROOM1-203ENST00000378679 RHPN2Q8IUC4 686 aa15.35■□□□□ 0.05
SHROOM1-203ENST00000378679 LRRC45Q96CN5 670 aa15.35■□□□□ 0.05
SHROOM1-203ENST00000378679 ZMYND10O75800 440 aa15.35■□□□□ 0.05
SHROOM1-203ENST00000378679 DGAT1O75907 488 aa15.35■□□□□ 0.05
SHROOM1-203ENST00000378679 VPS41P49754 854 aa15.35■□□□□ 0.05
SHROOM1-203ENST00000378679 CCZ1BP86790 482 aa15.35■□□□□ 0.05
SHROOM1-203ENST00000378679 CCZ1P86791 482 aaPredicted RBP15.35■□□□□ 0.05
SHROOM1-203ENST00000378679 SNAPC2Q13487 334 aa15.35■□□□□ 0.05
SHROOM1-203ENST00000378679 CAPN11Q9UMQ6 739 aa15.35■□□□□ 0.05
SHROOM1-203ENST00000378679 PITPNM2Q9BZ72 1349 aa15.34■□□□□ 0.05
SHROOM1-203ENST00000378679 GAS8O95995 478 aa15.34■□□□□ 0.05
SHROOM1-203ENST00000378679 COPB2P35606 906 aa15.34■□□□□ 0.05
SHROOM1-203ENST00000378679 NFX1Q12986 1120 aaKnown RBP15.34■□□□□ 0.05
SHROOM1-203ENST00000378679 CATSPER4Q7RTX7 472 aa15.34■□□□□ 0.05
SHROOM1-203ENST00000378679 PHLDB2Q86SQ0 1253 aa15.34■□□□□ 0.05
SHROOM1-203ENST00000378679 RPF1Q9H9Y2 349 aaKnown RBP15.34■□□□□ 0.05
SHROOM1-203ENST00000378679 AGPAT5Q9NUQ2 364 aa15.34■□□□□ 0.05
SHROOM1-203ENST00000378679 TLR3O15455 904 aaKnown RBP15.34■□□□□ 0.05
SHROOM1-203ENST00000378679 MMP14P50281 582 aa15.34■□□□□ 0.05
SHROOM1-203ENST00000378679 GUCY2FP51841 1108 aa15.34■□□□□ 0.05
SHROOM1-203ENST00000378679 GFPT1Q06210 699 aaPredicted RBP15.34■□□□□ 0.05
SHROOM1-203ENST00000378679 FRMD5Q7Z6J6 570 aa15.34■□□□□ 0.05
SHROOM1-203ENST00000378679 SYT2Q8N9I0 419 aaPredicted RBP15.34■□□□□ 0.05
SHROOM1-203ENST00000378679 SEPT1Q8WYJ6 367 aa15.34■□□□□ 0.05
SHROOM1-203ENST00000378679 PAIP2Q9BPZ3 127 aaKnown RBP15.34■□□□□ 0.05
SHROOM1-203ENST00000378679 GOLGA6BA6NDN3 693 aa15.34■□□□□ 0.05
SHROOM1-203ENST00000378679 IRX5P78411 483 aaPredicted RBP15.34■□□□□ 0.05
SHROOM1-203ENST00000378679 ZNF394Q53GI3 561 aa15.34■□□□□ 0.05
SHROOM1-203ENST00000378679 E4F1Q66K89 784 aaPredicted RBP15.34■□□□□ 0.05
SHROOM1-203ENST00000378679 SCYL2Q6P3W7 929 aa15.34■□□□□ 0.05
SHROOM1-203ENST00000378679 SCARA5Q6ZMJ2 495 aa15.34■□□□□ 0.05
SHROOM1-203ENST00000378679 ARFGAP2Q8N6H7 521 aa15.34■□□□□ 0.05
SHROOM1-203ENST00000378679 TMEM143Q96AN5 459 aa15.34■□□□□ 0.05
SHROOM1-203ENST00000378679 IRX2Q9BZI1 471 aaPredicted RBP15.34■□□□□ 0.05
SHROOM1-203ENST00000378679 KIAA1683Q9H0B3 1180 aa15.34■□□□□ 0.05
SHROOM1-203ENST00000378679 KIAA1586Q9HCI6 787 aa15.34■□□□□ 0.05
SHROOM1-203ENST00000378679 NUB1Q9Y5A7 615 aa15.34■□□□□ 0.05
SHROOM1-203ENST00000378679 A0A087X0B3 334 aa15.33■□□□□ 0.05
SHROOM1-203ENST00000378679 ASB14A6NK59 587 aa15.33■□□□□ 0.05
SHROOM1-203ENST00000378679 MAFGO15525 162 aa15.33■□□□□ 0.05
SHROOM1-203ENST00000378679 AP5Z1O43299 807 aa15.33■□□□□ 0.05
SHROOM1-203ENST00000378679 ATF7P17544 494 aaPredicted RBP15.33■□□□□ 0.05
SHROOM1-203ENST00000378679 LIG3P49916 1009 aa15.33■□□□□ 0.05
SHROOM1-203ENST00000378679 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.33■□□□□ 0.05
SHROOM1-203ENST00000378679 MKL1Q969V6 931 aa15.33■□□□□ 0.05
SHROOM1-203ENST00000378679 FAM81BQ96LP2 452 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms