RNA–Protein interactions for RNA: ENST00000378513.7

RER1-203, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-203ENST00000378513 GDF3Q9NR23 364 aa16.79■□□□□ 0.28
RER1-203ENST00000378513 NOC2LQ9Y3T9 749 aaKnown RBP16.79■□□□□ 0.28
RER1-203ENST00000378513 KRIT1O00522 736 aa16.78■□□□□ 0.28
RER1-203ENST00000378513 SART1O43290 800 aaKnown RBP16.78■□□□□ 0.28
RER1-203ENST00000378513 DAPK3O43293 454 aa16.78■□□□□ 0.28
RER1-203ENST00000378513 USP8P40818 1118 aa16.78■□□□□ 0.28
RER1-203ENST00000378513 PPFIA1Q13136 1202 aa16.78■□□□□ 0.28
RER1-203ENST00000378513 PAK2Q13177 524 aa16.78■□□□□ 0.28
RER1-203ENST00000378513 LRCH2Q5VUJ6 765 aa16.78■□□□□ 0.28
RER1-203ENST00000378513 FAM186BQ8IYM0 893 aa16.78■□□□□ 0.28
RER1-203ENST00000378513 CRYGNQ8WXF5 182 aa16.78■□□□□ 0.28
RER1-203ENST00000378513 KAT2BQ92831 832 aa16.78■□□□□ 0.28
RER1-203ENST00000378513 ZDHHC15Q96MV8 337 aa16.78■□□□□ 0.28
RER1-203ENST00000378513 TRIM51Q9BSJ1 452 aa16.78■□□□□ 0.28
RER1-203ENST00000378513 GLIS2Q9BZE0 524 aaPredicted RBP16.78■□□□□ 0.28
RER1-203ENST00000378513 LTBP4Q8N2S1 1624 aa16.78■□□□□ 0.28
RER1-203ENST00000378513 TTI1O43156 1089 aa16.78■□□□□ 0.28
RER1-203ENST00000378513 CALUO43852 315 aaPredicted RBP16.78■□□□□ 0.28
RER1-203ENST00000378513 OPA1O60313 960 aa16.78■□□□□ 0.28
RER1-203ENST00000378513 ARP10275 920 aa16.78■□□□□ 0.28
RER1-203ENST00000378513 GALCP54803 685 aa16.78■□□□□ 0.28
RER1-203ENST00000378513 DGKZQ13574 1117 aa16.78■□□□□ 0.28
RER1-203ENST00000378513 LNX1Q8TBB1 728 aaPredicted RBP16.78■□□□□ 0.28
RER1-203ENST00000378513 DCAF4Q8WV16 495 aa16.78■□□□□ 0.28
RER1-203ENST00000378513 HOOK2Q96ED9 719 aa16.78■□□□□ 0.28
RER1-203ENST00000378513 NUCKS1Q9H1E3 243 aaKnown RBP16.78■□□□□ 0.28
RER1-203ENST00000378513 NYAP2Q9P242 653 aa16.78■□□□□ 0.28
RER1-203ENST00000378513 CYP3A7-CYP3A51PA0A087WV96 503 aa16.78■□□□□ 0.28
RER1-203ENST00000378513 SLITRK3O94933 977 aa16.78■□□□□ 0.28
RER1-203ENST00000378513 CYP3A7P24462 503 aa16.78■□□□□ 0.28
RER1-203ENST00000378513 SREBF1P36956 1147 aa16.78■□□□□ 0.28
RER1-203ENST00000378513 EPM2AIP1Q7L775 607 aaPredicted RBP16.78■□□□□ 0.28
RER1-203ENST00000378513 TPCN2Q8NHX9 752 aa16.78■□□□□ 0.28
RER1-203ENST00000378513 SYN2Q92777 582 aaPredicted RBP16.78■□□□□ 0.28
RER1-203ENST00000378513 SH3GL2Q99962 352 aa16.78■□□□□ 0.28
RER1-203ENST00000378513 TRAF3IP3Q9Y228 551 aa16.78■□□□□ 0.28
RER1-203ENST00000378513 SHTN1A0MZ66 631 aa16.77■□□□□ 0.28
RER1-203ENST00000378513 NDUFAB1O14561 156 aa16.77■□□□□ 0.28
RER1-203ENST00000378513 NPR1P16066 1061 aa16.77■□□□□ 0.28
RER1-203ENST00000378513 MARSP56192 900 aaKnown RBP16.77■□□□□ 0.28
RER1-203ENST00000378513 DRAP1Q14919 205 aaPredicted RBP16.77■□□□□ 0.28
RER1-203ENST00000378513 RBM26Q5T8P6 1007 aaKnown RBP16.77■□□□□ 0.28
RER1-203ENST00000378513 CHADLQ6NUI6 762 aa16.77■□□□□ 0.28
RER1-203ENST00000378513 FRMD5Q7Z6J6 570 aa16.77■□□□□ 0.28
RER1-203ENST00000378513 EFCAB13Q8IY85 973 aa16.77■□□□□ 0.28
RER1-203ENST00000378513 UBLCP1Q8WVY7 318 aaPredicted RBP16.77■□□□□ 0.28
RER1-203ENST00000378513 ARHGEF26Q96DR7 871 aa16.77■□□□□ 0.28
RER1-203ENST00000378513 TYW1Q9NV66 732 aaKnown RBP16.77■□□□□ 0.28
RER1-203ENST00000378513 TMOD4Q9NZQ9 345 aa16.77■□□□□ 0.28
RER1-203ENST00000378513 PPP1R9AQ9ULJ8 1098 aa16.77■□□□□ 0.28
RER1-203ENST00000378513 RPS6KA5O75582 802 aa16.77■□□□□ 0.27
RER1-203ENST00000378513 H2AFZP0C0S5 128 aa16.77■□□□□ 0.27
RER1-203ENST00000378513 DLG4P78352 724 aa16.77■□□□□ 0.27
RER1-203ENST00000378513 ITIH3Q06033 890 aa16.77■□□□□ 0.27
RER1-203ENST00000378513 DACT2Q5SW24 774 aa16.77■□□□□ 0.27
RER1-203ENST00000378513 ODR4Q5SWX8 454 aa16.77■□□□□ 0.27
RER1-203ENST00000378513 RNF187Q5TA31 235 aaPredicted RBP16.77■□□□□ 0.27
RER1-203ENST00000378513 TMEM179Q6ZVK1 233 aa16.77■□□□□ 0.27
RER1-203ENST00000378513 H2AFVQ71UI9 128 aa16.77■□□□□ 0.27
RER1-203ENST00000378513 IQCKQ8N0W5 287 aa16.77■□□□□ 0.27
RER1-203ENST00000378513 UHMK1Q8TAS1 419 aaKnown RBP16.77■□□□□ 0.27
RER1-203ENST00000378513 MYO3BQ8WXR4 1341 aa16.77■□□□□ 0.27
RER1-203ENST00000378513 DNAJC12Q9UKB3 198 aa16.77■□□□□ 0.27
RER1-203ENST00000378513 PITPNM2Q9BZ72 1349 aa16.76■□□□□ 0.27
RER1-203ENST00000378513 GOLGA8KD6RF30 607 aa16.76■□□□□ 0.27
RER1-203ENST00000378513 EIF3HO15372 352 aaKnown RBP eCLIP16.76■□□□□ 0.27
RER1-203ENST00000378513 BUB1BO60566 1050 aaPredicted RBP16.76■□□□□ 0.27
RER1-203ENST00000378513 CPNE8Q86YQ8 564 aa16.76■□□□□ 0.27
RER1-203ENST00000378513 LRRC57Q8N9N7 239 aa16.76■□□□□ 0.27
RER1-203ENST00000378513 HOMER2Q9NSB8 354 aa16.76■□□□□ 0.27
RER1-203ENST00000378513 CAPN7Q9Y6W3 813 aa16.76■□□□□ 0.27
RER1-203ENST00000378513 DCDC2CA8MYV0 355 aa16.76■□□□□ 0.27
RER1-203ENST00000378513 PDXKO00764 312 aa16.76■□□□□ 0.27
RER1-203ENST00000378513 GUCY2CP25092 1073 aa16.76■□□□□ 0.27
RER1-203ENST00000378513 AP3B2Q13367 1082 aa16.76■□□□□ 0.27
RER1-203ENST00000378513 CAVIN3Q969G5 261 aa16.76■□□□□ 0.27
RER1-203ENST00000378513 QTRT2Q9H974 415 aaKnown RBP16.76■□□□□ 0.27
RER1-203ENST00000378513 PPANQ9NQ55 473 aaKnown RBP16.76■□□□□ 0.27
RER1-203ENST00000378513 TSKSQ9UJT2 592 aa16.76■□□□□ 0.27
RER1-203ENST00000378513 ZBTB12Q9Y330 459 aaPredicted RBP16.76■□□□□ 0.27
RER1-203ENST00000378513 ZMYM2Q9UBW7 1377 aa16.76■□□□□ 0.27
RER1-203ENST00000378513 SMIM23A6NLE4 172 aa16.75■□□□□ 0.27
RER1-203ENST00000378513 ATMINO43313 823 aaPredicted RBP16.75■□□□□ 0.27
RER1-203ENST00000378513 GAS7O60861 476 aa16.75■□□□□ 0.27
RER1-203ENST00000378513 FLOT1O75955 427 aa16.75■□□□□ 0.27
RER1-203ENST00000378513 FGGP02679 453 aa16.75■□□□□ 0.27
RER1-203ENST00000378513 INPP5BP32019 993 aa16.75■□□□□ 0.27
RER1-203ENST00000378513 TNNC1P63316 161 aa16.75■□□□□ 0.27
RER1-203ENST00000378513 FAM178BQ8IXR5 827 aa16.75■□□□□ 0.27
RER1-203ENST00000378513 SYCP3Q8IZU3 236 aa16.75■□□□□ 0.27
RER1-203ENST00000378513 SLC20A1Q8WUM9 679 aa16.75■□□□□ 0.27
RER1-203ENST00000378513 MKL1Q969V6 931 aa16.75■□□□□ 0.27
RER1-203ENST00000378513 IGLV3-22A0A075B6J6 115 aa16.75■□□□□ 0.27
RER1-203ENST00000378513 KLRG2A4D1S0 409 aaPredicted RBP16.75■□□□□ 0.27
RER1-203ENST00000378513 CALCAP01258 141 aa16.75■□□□□ 0.27
RER1-203ENST00000378513 TMOD1P28289 359 aa16.75■□□□□ 0.27
RER1-203ENST00000378513 OTOP1Q7RTM1 612 aa16.75■□□□□ 0.27
RER1-203ENST00000378513 GLG1Q92896 1179 aa16.75■□□□□ 0.27
RER1-203ENST00000378513 KAT5Q92993 513 aa16.75■□□□□ 0.27
RER1-203ENST00000378513 MBOAT7Q96N66 472 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms