RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 PNMA5Q96PV4 448 aa13.07□□□□□ -0.32
DEPDC4-202ENST00000378244 OSBPL7Q9BZF2 842 aa13.07□□□□□ -0.32
DEPDC4-202ENST00000378244 RCOR1Q9UKL0 485 aa13.07□□□□□ -0.32
DEPDC4-202ENST00000378244 DNM3Q9UQ16 869 aa13.07□□□□□ -0.32
DEPDC4-202ENST00000378244 AKT3Q9Y243 479 aa13.07□□□□□ -0.32
DEPDC4-202ENST00000378244 PCDHA2Q9Y5H9 948 aa13.07□□□□□ -0.32
DEPDC4-202ENST00000378244 COL1A2P08123 1366 aa13.07□□□□□ -0.32
DEPDC4-202ENST00000378244 LYPLA2O95372 231 aa13.07□□□□□ -0.32
DEPDC4-202ENST00000378244 ACRP10323 421 aa13.07□□□□□ -0.32
DEPDC4-202ENST00000378244 MAGEA10P43363 369 aaPredicted RBP13.07□□□□□ -0.32
DEPDC4-202ENST00000378244 RAD51AP2Q09MP3 1159 aa13.07□□□□□ -0.32
DEPDC4-202ENST00000378244 KIZQ2M2Z5 673 aa13.07□□□□□ -0.32
DEPDC4-202ENST00000378244 TRIM71Q2Q1W2 868 aaKnown RBP13.07□□□□□ -0.32
DEPDC4-202ENST00000378244 LRRC8DQ7L1W4 858 aa13.07□□□□□ -0.32
DEPDC4-202ENST00000378244 CALML4Q96GE6 196 aa13.07□□□□□ -0.32
DEPDC4-202ENST00000378244 CEP89Q96ST8 783 aa13.07□□□□□ -0.32
DEPDC4-202ENST00000378244 CIZ1Q9ULV3 898 aaPredicted RBP13.07□□□□□ -0.32
DEPDC4-202ENST00000378244 ARHGEF35A5YM69 484 aa13.06□□□□□ -0.32
DEPDC4-202ENST00000378244 RSPH10B2B2RC85 870 aa13.06□□□□□ -0.32
DEPDC4-202ENST00000378244 IQCF3P0C7M6 154 aa13.06□□□□□ -0.32
DEPDC4-202ENST00000378244 RSPH10BP0C881 870 aa13.06□□□□□ -0.32
DEPDC4-202ENST00000378244 SELPP16109 830 aa13.06□□□□□ -0.32
DEPDC4-202ENST00000378244 MFSD5Q6N075 450 aa13.06□□□□□ -0.32
DEPDC4-202ENST00000378244 SHC4Q6S5L8 630 aa13.06□□□□□ -0.32
DEPDC4-202ENST00000378244 KSR1Q8IVT5 923 aa13.06□□□□□ -0.32
DEPDC4-202ENST00000378244 CCDC155Q8N6L0 562 aa13.06□□□□□ -0.32
DEPDC4-202ENST00000378244 CAGE1Q8TC20 777 aa13.06□□□□□ -0.32
DEPDC4-202ENST00000378244 SMIM35A0A1B0GVV1 85 aa13.06□□□□□ -0.32
DEPDC4-202ENST00000378244 PITPNM1O00562 1244 aa13.06□□□□□ -0.32
DEPDC4-202ENST00000378244 MAGEB2O15479 319 aa13.06□□□□□ -0.32
DEPDC4-202ENST00000378244 MAFO75444 373 aaPredicted RBP13.06□□□□□ -0.32
DEPDC4-202ENST00000378244 PLCG1P19174 1290 aa13.06□□□□□ -0.32
DEPDC4-202ENST00000378244 TMOD1P28289 359 aa13.06□□□□□ -0.32
DEPDC4-202ENST00000378244 MKRN4PQ13434 485 aaPredicted RBP13.06□□□□□ -0.32
DEPDC4-202ENST00000378244 EMC2Q15006 297 aa13.06□□□□□ -0.32
DEPDC4-202ENST00000378244 AXDND1Q5T1B0 1012 aaPredicted RBP13.06□□□□□ -0.32
DEPDC4-202ENST00000378244 RSPH3Q86UC2 560 aa13.06□□□□□ -0.32
DEPDC4-202ENST00000378244 LRRC15Q8TF66 581 aa13.06□□□□□ -0.32
DEPDC4-202ENST00000378244 SCLT1Q96NL6 688 aa13.06□□□□□ -0.32
DEPDC4-202ENST00000378244 CDHR5Q9HBB8 845 aa13.06□□□□□ -0.32
DEPDC4-202ENST00000378244 GPRC5CQ9NQ84 441 aa13.06□□□□□ -0.32
DEPDC4-202ENST00000378244 ANKEF1Q9NU02 776 aa13.06□□□□□ -0.32
DEPDC4-202ENST00000378244 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.05□□□□□ -0.32
DEPDC4-202ENST00000378244 CSDE1O75534 798 aaKnown RBP13.05□□□□□ -0.32
DEPDC4-202ENST00000378244 CHRNA1P02708 482 aa13.05□□□□□ -0.32
DEPDC4-202ENST00000378244 TXLNAP40222 546 aa13.05□□□□□ -0.32
DEPDC4-202ENST00000378244 DNM2P50570 870 aa13.05□□□□□ -0.32
DEPDC4-202ENST00000378244 EPHB4P54760 987 aa13.05□□□□□ -0.32
DEPDC4-202ENST00000378244 NLRP11P59045 1033 aaKnown RBP13.05□□□□□ -0.32
DEPDC4-202ENST00000378244 MBTPS1Q14703 1052 aa13.05□□□□□ -0.32
DEPDC4-202ENST00000378244 PADI6Q6TGC4 694 aa13.05□□□□□ -0.32
DEPDC4-202ENST00000378244 RHPN2Q8IUC4 686 aa13.05□□□□□ -0.32
DEPDC4-202ENST00000378244 TMEM199Q8N511 208 aa13.05□□□□□ -0.32
DEPDC4-202ENST00000378244 MAP7D2Q96T17 732 aa13.05□□□□□ -0.32
DEPDC4-202ENST00000378244 SCAND2PQ9GZW5 306 aaPredicted RBP13.05□□□□□ -0.32
DEPDC4-202ENST00000378244 NT5C3AQ9H0P0 336 aa13.05□□□□□ -0.32
DEPDC4-202ENST00000378244 DHX33Q9H6R0 707 aaKnown RBP13.05□□□□□ -0.32
DEPDC4-202ENST00000378244 STK24Q9Y6E0 443 aa13.05□□□□□ -0.32
DEPDC4-202ENST00000378244 CDY2AQ9Y6F7 541 aa13.05□□□□□ -0.32
DEPDC4-202ENST00000378244 WDR81Q562E7 1941 aa13.05□□□□□ -0.32
DEPDC4-202ENST00000378244 KDM3AQ9Y4C1 1321 aa13.05□□□□□ -0.32
DEPDC4-202ENST00000378244 CUTAO60888 179 aa13.05□□□□□ -0.32
DEPDC4-202ENST00000378244 XRCC6P12956 609 aaKnown RBP eCLIP13.05□□□□□ -0.32
DEPDC4-202ENST00000378244 FPGSQ05932 587 aa13.05□□□□□ -0.32
DEPDC4-202ENST00000378244 XPNPEP1Q9NQW7 623 aa13.05□□□□□ -0.32
DEPDC4-202ENST00000378244 SUCLA2Q9P2R7 463 aaPredicted RBP13.05□□□□□ -0.32
DEPDC4-202ENST00000378244 A0A087X0B3 334 aa13.04□□□□□ -0.32
DEPDC4-202ENST00000378244 M0QZ92 97 aa13.04□□□□□ -0.32
DEPDC4-202ENST00000378244 DGAT1O75907 488 aa13.04□□□□□ -0.32
DEPDC4-202ENST00000378244 GHRP10912 638 aa13.04□□□□□ -0.32
DEPDC4-202ENST00000378244 MRPS6P82932 125 aaKnown RBP13.04□□□□□ -0.32
DEPDC4-202ENST00000378244 FAM102BQ5T8I3 360 aa13.04□□□□□ -0.32
DEPDC4-202ENST00000378244 IER5Q5VY09 327 aa13.04□□□□□ -0.32
DEPDC4-202ENST00000378244 CHRDL2Q6WN34 429 aa13.04□□□□□ -0.32
DEPDC4-202ENST00000378244 PRPF31Q8WWY3 499 aaKnown RBP13.04□□□□□ -0.32
DEPDC4-202ENST00000378244 NLRP4Q96MN2 994 aa13.04□□□□□ -0.32
DEPDC4-202ENST00000378244 OSMRQ99650 979 aa13.04□□□□□ -0.32
DEPDC4-202ENST00000378244 MTRQ99707 1265 aa13.04□□□□□ -0.32
DEPDC4-202ENST00000378244 CCSER1Q9C0I3 900 aa13.04□□□□□ -0.32
DEPDC4-202ENST00000378244 CCDC39Q9UFE4 941 aa13.04□□□□□ -0.32
DEPDC4-202ENST00000378244 DBR1Q9UK59 544 aaKnown RBP13.04□□□□□ -0.32
DEPDC4-202ENST00000378244 IGKV6-21A0A0C4DH24 114 aa13.04□□□□□ -0.32
DEPDC4-202ENST00000378244 NBNO60934 754 aa13.04□□□□□ -0.32
DEPDC4-202ENST00000378244 SRGAP2CP0DJJ0 459 aa13.04□□□□□ -0.32
DEPDC4-202ENST00000378244 CACNB1Q02641 598 aaPredicted RBP13.04□□□□□ -0.32
DEPDC4-202ENST00000378244 RRAGBQ5VZM2 374 aa13.04□□□□□ -0.32
DEPDC4-202ENST00000378244 TRAF7Q6Q0C0 670 aa13.04□□□□□ -0.32
DEPDC4-202ENST00000378244 OTOP2Q7RTS6 562 aa13.04□□□□□ -0.32
DEPDC4-202ENST00000378244 NLRP7Q8WX94 980 aa13.04□□□□□ -0.32
DEPDC4-202ENST00000378244 RUSC1Q9BVN2 902 aa13.04□□□□□ -0.32
DEPDC4-202ENST00000378244 ATP6V0A4Q9HBG4 840 aa13.04□□□□□ -0.32
DEPDC4-202ENST00000378244 EVPLQ92817 2033 aa13.03□□□□□ -0.32
DEPDC4-202ENST00000378244 A0A1B0GVL5 298 aa13.03□□□□□ -0.32
DEPDC4-202ENST00000378244 EYA4O95677 639 aa13.03□□□□□ -0.32
DEPDC4-202ENST00000378244 PLA2G4BP0C869 781 aa13.03□□□□□ -0.32
DEPDC4-202ENST00000378244 MUTP22033 750 aa13.03□□□□□ -0.32
DEPDC4-202ENST00000378244 RFC5P40937 340 aa13.03□□□□□ -0.32
DEPDC4-202ENST00000378244 MCM6Q14566 821 aa13.03□□□□□ -0.32
DEPDC4-202ENST00000378244 GPNMBQ14956 572 aa13.03□□□□□ -0.32
DEPDC4-202ENST00000378244 TMEM119Q4V9L6 283 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms