RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 ODF2LQ9ULJ1 636 aa11.6□□□□□ -0.55
PDPN-203ENST00000376061 MAPK8IP1Q9UQF2 711 aa11.6□□□□□ -0.55
PDPN-203ENST00000376061 PCDHA2Q9Y5H9 948 aa11.6□□□□□ -0.55
PDPN-203ENST00000376061 IKBKBO14920 756 aa11.59□□□□□ -0.55
PDPN-203ENST00000376061 FAM13AO94988 1023 aa11.59□□□□□ -0.55
PDPN-203ENST00000376061 GNRH1P01148 92 aa11.59□□□□□ -0.55
PDPN-203ENST00000376061 MMP3P08254 477 aa11.59□□□□□ -0.55
PDPN-203ENST00000376061 ZNF286BP0CG31 522 aa11.59□□□□□ -0.55
PDPN-203ENST00000376061 ELNP15502 786 aa11.59□□□□□ -0.55
PDPN-203ENST00000376061 MARK3P27448 753 aa11.59□□□□□ -0.55
PDPN-203ENST00000376061 ERCC5P28715 1186 aaPredicted RBP11.59□□□□□ -0.55
PDPN-203ENST00000376061 SLC26A2P50443 739 aa11.59□□□□□ -0.55
PDPN-203ENST00000376061 C1QTNF8P60827 252 aa11.59□□□□□ -0.55
PDPN-203ENST00000376061 TRIM32Q13049 653 aa11.59□□□□□ -0.55
PDPN-203ENST00000376061 PSMD2Q13200 908 aa11.59□□□□□ -0.55
PDPN-203ENST00000376061 NCAPHQ15003 741 aa11.59□□□□□ -0.55
PDPN-203ENST00000376061 MTERF2Q49AM1 385 aa11.59□□□□□ -0.55
PDPN-203ENST00000376061 HERC4Q5GLZ8 1057 aaPredicted RBP11.59□□□□□ -0.55
PDPN-203ENST00000376061 CT47A1Q5JQC4 288 aaPredicted RBP11.59□□□□□ -0.55
PDPN-203ENST00000376061 L1TD1Q5T7N2 865 aaKnown RBP11.59□□□□□ -0.55
PDPN-203ENST00000376061 KLHL10Q6JEL2 608 aa11.59□□□□□ -0.55
PDPN-203ENST00000376061 TLK2Q86UE8 772 aa11.59□□□□□ -0.55
PDPN-203ENST00000376061 GLIS3Q8NEA6 775 aa11.59□□□□□ -0.55
PDPN-203ENST00000376061 ATP8B4Q8TF62 1192 aa11.59□□□□□ -0.55
PDPN-203ENST00000376061 ZNF296Q8WUU4 475 aaPredicted RBP11.59□□□□□ -0.55
PDPN-203ENST00000376061 CEP89Q96ST8 783 aa11.59□□□□□ -0.55
PDPN-203ENST00000376061 TIPINQ9BVW5 301 aa11.59□□□□□ -0.55
PDPN-203ENST00000376061 NIFKQ9BYG3 293 aaKnown RBP11.59□□□□□ -0.55
PDPN-203ENST00000376061 SMARCAD1Q9H4L7 1026 aa11.59□□□□□ -0.55
PDPN-203ENST00000376061 PARVGQ9HBI0 331 aa11.59□□□□□ -0.55
PDPN-203ENST00000376061 SLC39A2Q9NP94 309 aa11.59□□□□□ -0.55
PDPN-203ENST00000376061 FAM184BQ9ULE4 1060 aa11.59□□□□□ -0.55
PDPN-203ENST00000376061 COL4A3BPQ9Y5P4 624 aa11.59□□□□□ -0.55
PDPN-203ENST00000376061 BECN2A8MW95 431 aa11.58□□□□□ -0.56
PDPN-203ENST00000376061 AKR1A1P14550 325 aa11.58□□□□□ -0.56
PDPN-203ENST00000376061 HOXD10P28358 340 aa11.58□□□□□ -0.56
PDPN-203ENST00000376061 MAP2K1Q02750 393 aaPredicted RBP11.58□□□□□ -0.56
PDPN-203ENST00000376061 PAK1Q13153 545 aa11.58□□□□□ -0.56
PDPN-203ENST00000376061 STIM1Q13586 685 aa11.58□□□□□ -0.56
PDPN-203ENST00000376061 PLCB4Q15147 1175 aa11.58□□□□□ -0.56
PDPN-203ENST00000376061 TARBP2Q15633 366 aaKnown RBP11.58□□□□□ -0.56
PDPN-203ENST00000376061 UVSSAQ2YD98 709 aa11.58□□□□□ -0.56
PDPN-203ENST00000376061 ENOX1Q8TC92 643 aaKnown RBP11.58□□□□□ -0.56
PDPN-203ENST00000376061 NELFBQ8WX92 580 aa11.58□□□□□ -0.56
PDPN-203ENST00000376061 POLD4Q9HCU8 107 aa11.58□□□□□ -0.56
PDPN-203ENST00000376061 GPRC5CQ9NQ84 441 aa11.58□□□□□ -0.56
PDPN-203ENST00000376061 XPNPEP1Q9NQW7 623 aa11.58□□□□□ -0.56
PDPN-203ENST00000376061 OLFML3Q9NRN5 406 aa11.58□□□□□ -0.56
PDPN-203ENST00000376061 TBC1D7Q9P0N9 293 aa11.58□□□□□ -0.56
PDPN-203ENST00000376061 SEL1LQ9UBV2 794 aa11.58□□□□□ -0.56
PDPN-203ENST00000376061 TSKSQ9UJT2 592 aa11.58□□□□□ -0.56
PDPN-203ENST00000376061 CEP350Q5VT06 3117 aa11.58□□□□□ -0.56
PDPN-203ENST00000376061 A6NJR5 290 aa11.57□□□□□ -0.56
PDPN-203ENST00000376061 SFI1A8K8P3 1242 aa11.57□□□□□ -0.56
PDPN-203ENST00000376061 ZBTB42B2RXF5 422 aa11.57□□□□□ -0.56
PDPN-203ENST00000376061 GOLGA6L19H0YKK7 550 aa11.57□□□□□ -0.56
PDPN-203ENST00000376061 PSMA7O14818 248 aa11.57□□□□□ -0.56
PDPN-203ENST00000376061 DYNC1LI2O43237 492 aaPredicted RBP11.57□□□□□ -0.56
PDPN-203ENST00000376061 ADCY3O60266 1144 aa11.57□□□□□ -0.56
PDPN-203ENST00000376061 DGAT1O75907 488 aa11.57□□□□□ -0.56
PDPN-203ENST00000376061 HMGCRP04035 888 aa11.57□□□□□ -0.56
PDPN-203ENST00000376061 PPP1R2P41236 205 aa11.57□□□□□ -0.56
PDPN-203ENST00000376061 CASP5P51878 434 aa11.57□□□□□ -0.56
PDPN-203ENST00000376061 STX17P56962 302 aa11.57□□□□□ -0.56
PDPN-203ENST00000376061 CACNB2Q08289 660 aaPredicted RBP11.57□□□□□ -0.56
PDPN-203ENST00000376061 EMC2Q15006 297 aa11.57□□□□□ -0.56
PDPN-203ENST00000376061 LRRC41Q15345 812 aa11.57□□□□□ -0.56
PDPN-203ENST00000376061 MAEAQ7L5Y9 396 aa11.57□□□□□ -0.56
PDPN-203ENST00000376061 EPM2AIP1Q7L775 607 aaPredicted RBP11.57□□□□□ -0.56
PDPN-203ENST00000376061 MYOCDQ8IZQ8 938 aa11.57□□□□□ -0.56
PDPN-203ENST00000376061 GUF1Q8N442 669 aaKnown RBP11.57□□□□□ -0.56
PDPN-203ENST00000376061 MYCT1Q8N699 235 aa11.57□□□□□ -0.56
PDPN-203ENST00000376061 MCPH1Q8NEM0 835 aa11.57□□□□□ -0.56
PDPN-203ENST00000376061 DHTKD1Q96HY7 919 aaPredicted RBP11.57□□□□□ -0.56
PDPN-203ENST00000376061 DRC1Q96MC2 740 aa11.57□□□□□ -0.56
PDPN-203ENST00000376061 FIZ1Q96SL8 496 aa11.57□□□□□ -0.56
PDPN-203ENST00000376061 C16orf70Q9BSU1 422 aa11.57□□□□□ -0.56
PDPN-203ENST00000376061 HSD3B7Q9H2F3 369 aa11.57□□□□□ -0.56
PDPN-203ENST00000376061 DHX33Q9H6R0 707 aaKnown RBP11.57□□□□□ -0.56
PDPN-203ENST00000376061 ATP6V0A4Q9HBG4 840 aa11.57□□□□□ -0.56
PDPN-203ENST00000376061 PDLIM7Q9NR12 457 aa11.57□□□□□ -0.56
PDPN-203ENST00000376061 NRBP2Q9NSY0 501 aa11.57□□□□□ -0.56
PDPN-203ENST00000376061 ERAP1Q9NZ08 941 aa11.57□□□□□ -0.56
PDPN-203ENST00000376061 RWDD2AQ9UIY3 292 aa11.57□□□□□ -0.56
PDPN-203ENST00000376061 Q9Y3F1 56 aa11.57□□□□□ -0.56
PDPN-203ENST00000376061 CENPFP49454 3210 aa11.57□□□□□ -0.56
PDPN-203ENST00000376061 TRIM49BA6NDI0 452 aa11.56□□□□□ -0.56
PDPN-203ENST00000376061 SMTNL1A8MU46 457 aa11.56□□□□□ -0.56
PDPN-203ENST00000376061 DUSP11O75319 330 aaKnown RBP11.56□□□□□ -0.56
PDPN-203ENST00000376061 PPFIA4O75335 1185 aa11.56□□□□□ -0.56
PDPN-203ENST00000376061 MYBP10242 640 aa11.56□□□□□ -0.56
PDPN-203ENST00000376061 RFC5P40937 340 aa11.56□□□□□ -0.56
PDPN-203ENST00000376061 POLGP54098 1239 aaPredicted RBP11.56□□□□□ -0.56
PDPN-203ENST00000376061 PMS1P54277 932 aaKnown RBP11.56□□□□□ -0.56
PDPN-203ENST00000376061 IRX5P78411 483 aaPredicted RBP11.56□□□□□ -0.56
PDPN-203ENST00000376061 DGKDQ16760 1214 aa11.56□□□□□ -0.56
PDPN-203ENST00000376061 ODR4Q5SWX8 454 aa11.56□□□□□ -0.56
PDPN-203ENST00000376061 FAM102BQ5T8I3 360 aa11.56□□□□□ -0.56
PDPN-203ENST00000376061 MAP3K21Q5TCX8 1036 aa11.56□□□□□ -0.56
PDPN-203ENST00000376061 RAET1EQ8TD07 263 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms