RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 ADAM33Q9BZ11 813 aa7.06□□□□□ -1.28
SMC1A-202ENST00000375340 NBPF3Q9H094 633 aa7.06□□□□□ -1.28
SMC1A-202ENST00000375340 NXNQ6DKJ4 435 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 RNF34Q969K3 372 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 C7orf25Q9BPX7 421 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 FAM118BQ9BPY3 351 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 SAYSD1Q9NPB0 183 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 TCRBV5S4A2TA0A5A2 114 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 BMP3P12645 472 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 MAN1A1P33908 653 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 IGBP1P78318 339 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 ANKRD20A3Q5VUR7 823 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 FAM47EQ6ZV65 393 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 MAD1L1Q9Y6D9 718 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 CHN1P15882 459 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 OSTNP61366 133 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 PPP4R3CPQ6ZMV5 832 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 SESTD1Q86VW0 696 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 CDAN1Q8IWY9 1227 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 LINC00116Q8NCU8 138 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 SLC35G2Q8TBE7 412 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 SAAL1Q96ER3 474 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 SLC16A4O15374 487 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 ADCY2Q08462 1091 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 SYCP2LQ5T4T6 812 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 LCMT1Q9UIC8 334 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 FAM205AQ6ZU69 1335 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 RHOBTB3O94955 611 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 CARSP49589 748 aaKnown RBP7.05□□□□□ -1.28
SMC1A-202ENST00000375340 C6orf118Q5T5N4 469 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 JDP2Q8WYK2 163 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 TGS1Q96RS0 853 aaKnown RBP7.05□□□□□ -1.28
SMC1A-202ENST00000375340 TRIM6Q9C030 488 aaPredicted RBP7.05□□□□□ -1.28
SMC1A-202ENST00000375340 PDHA1P08559 390 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 TAL1P17542 331 aaPredicted RBP7.05□□□□□ -1.28
SMC1A-202ENST00000375340 NMT1P30419 496 aaKnown RBP7.05□□□□□ -1.28
SMC1A-202ENST00000375340 SOX5P35711 763 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 NUGGCQ68CJ6 796 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 DCAF4Q8WV16 495 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 NACC1Q96RE7 527 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 DNAJC7Q99615 494 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 CD248Q9HCU0 757 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 ANAPC4Q9UJX5 808 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 H0Y3Z8 333 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 H7C0C1 242 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 STK10O94804 968 aaKnown RBP7.05□□□□□ -1.28
SMC1A-202ENST00000375340 MDH1P40925 334 aaKnown RBP7.05□□□□□ -1.28
SMC1A-202ENST00000375340 ATP5OP48047 213 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 PSMD6Q15008 389 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 CCDC93Q567U6 631 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 ZNF34Q8IZ26 560 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 ZNF512BQ96KM6 892 aaPredicted RBP7.05□□□□□ -1.28
SMC1A-202ENST00000375340 EIF2AK1Q9BQI3 630 aaKnown RBP7.05□□□□□ -1.28
SMC1A-202ENST00000375340 KLC4Q9NSK0 619 aa7.05□□□□□ -1.28
SMC1A-202ENST00000375340 DBR1Q9UK59 544 aaKnown RBP7.05□□□□□ -1.28
SMC1A-202ENST00000375340 TTC7AQ9ULT0 858 aaPredicted RBP7.05□□□□□ -1.28
SMC1A-202ENST00000375340 KITP10721 976 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 CCDC14Q49A88 953 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 KCTD6Q8NC69 237 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 ZNF564Q8TBZ8 553 aaPredicted RBP7.04□□□□□ -1.28
SMC1A-202ENST00000375340 SPZ1Q9BXG8 430 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 TRPC6Q9Y210 931 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 CRCPO75575 148 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 SERPINB6P35237 376 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 PRELPP51888 382 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 PEX3P56589 373 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 LONRF1Q17RB8 773 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 C12orf60Q5U649 245 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 VCXQ9H320 206 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 GH2P01242 217 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 SLMAPQ14BN4 828 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 GIMAP8Q8ND71 665 aaPredicted RBP7.04□□□□□ -1.28
SMC1A-202ENST00000375340 KLHL29Q96CT2 875 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 PAGR1Q9BTK6 254 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 TRIM4Q9C037 500 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 FLT1P17948 1338 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 CCND2P30279 289 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 MXI1P50539 228 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 SPATA24Q86W54 205 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 MDM1Q8TC05 714 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 FAM167BQ9BTA0 163 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 TXLNGQ9NUQ3 528 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 ANAPC7Q9UJX3 599 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 SMIM24O75264 130 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 CAMTA2O94983 1202 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 CRKP46108 304 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 SEC24CP53992 1094 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 PTK2Q05397 1052 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 GEN1Q17RS7 908 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.04□□□□□ -1.28
SMC1A-202ENST00000375340 REEP2Q9BRK0 252 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 ARFGEF2Q9Y6D5 1785 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 FOSP01100 380 aaPredicted RBP7.04□□□□□ -1.28
SMC1A-202ENST00000375340 FTLP02792 175 aaPredicted RBP7.04□□□□□ -1.28
SMC1A-202ENST00000375340 IRX4P78413 519 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 BASP1P80723 227 aaKnown RBP7.04□□□□□ -1.28
SMC1A-202ENST00000375340 NTRK3Q16288 839 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 TMCO4Q5TGY1 634 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 RFX8Q6ZV50 586 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 GLG1Q92896 1179 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms