RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 NEDD1Q8NHV4 660 aa12.4□□□□□ -0.42
PTCH1-203ENST00000375274 CNKSR1Q969H4 720 aa12.4□□□□□ -0.42
PTCH1-203ENST00000375274 SCOCQ9UIL1 159 aa12.4□□□□□ -0.42
PTCH1-203ENST00000375274 PTPRUQ92729 1446 aa12.4□□□□□ -0.42
PTCH1-203ENST00000375274 LRRIQ1Q96JM4 1722 aa12.4□□□□□ -0.42
PTCH1-203ENST00000375274 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.4□□□□□ -0.42
PTCH1-203ENST00000375274 SNAP25P60880 206 aa12.4□□□□□ -0.42
PTCH1-203ENST00000375274 TFAMQ00059 246 aaKnown RBP12.4□□□□□ -0.42
PTCH1-203ENST00000375274 TAF12Q16514 161 aa12.4□□□□□ -0.42
PTCH1-203ENST00000375274 TMEM179Q6ZVK1 233 aa12.4□□□□□ -0.42
PTCH1-203ENST00000375274 ELOA2Q8IYF1 753 aaPredicted RBP12.4□□□□□ -0.42
PTCH1-203ENST00000375274 NSMCE1Q8WV22 266 aa12.4□□□□□ -0.42
PTCH1-203ENST00000375274 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.4□□□□□ -0.423e-6■■■■■ 50.8
PTCH1-203ENST00000375274 RFFLQ8WZ73 363 aa12.4□□□□□ -0.42
PTCH1-203ENST00000375274 RIOK1Q9BRS2 568 aaKnown RBP12.4□□□□□ -0.42
PTCH1-203ENST00000375274 MLXIPLQ9NP71 852 aa12.4□□□□□ -0.42
PTCH1-203ENST00000375274 SEPT10Q9P0V9 454 aa12.4□□□□□ -0.42
PTCH1-203ENST00000375274 HPCAL4Q9UM19 191 aa12.4□□□□□ -0.42
PTCH1-203ENST00000375274 FAM187AA6NFU0 413 aa12.4□□□□□ -0.42
PTCH1-203ENST00000375274 ZNF233A6NK53 670 aa12.4□□□□□ -0.42
PTCH1-203ENST00000375274 USP17L10C9JJH3 530 aa12.4□□□□□ -0.42
PTCH1-203ENST00000375274 DCTN3O75935 186 aa12.4□□□□□ -0.42
PTCH1-203ENST00000375274 BRAFP15056 766 aa12.4□□□□□ -0.42
PTCH1-203ENST00000375274 DCAF15Q66K64 600 aa12.4□□□□□ -0.42
PTCH1-203ENST00000375274 PPP1R18Q6NYC8 613 aa12.4□□□□□ -0.42
PTCH1-203ENST00000375274 SCYL1Q96KG9 808 aa12.4□□□□□ -0.42
PTCH1-203ENST00000375274 HEMGNQ9BXL5 484 aa12.4□□□□□ -0.42
PTCH1-203ENST00000375274 VCX3AQ9NNX9 186 aa12.4□□□□□ -0.42
PTCH1-203ENST00000375274 SAYSD1Q9NPB0 183 aa12.4□□□□□ -0.42
PTCH1-203ENST00000375274 NXF1Q9UBU9 619 aaKnown RBP12.4□□□□□ -0.42
PTCH1-203ENST00000375274 LMTK2Q8IWU2 1503 aa12.39□□□□□ -0.43
PTCH1-203ENST00000375274 EIF3HO15372 352 aaKnown RBP eCLIP12.39□□□□□ -0.43
PTCH1-203ENST00000375274 CPP00450 1065 aa12.39□□□□□ -0.43
PTCH1-203ENST00000375274 COG7P83436 770 aa12.39□□□□□ -0.43
PTCH1-203ENST00000375274 PTPAQ15257 358 aa12.39□□□□□ -0.43
PTCH1-203ENST00000375274 MS4A14Q96JA4 679 aa12.39□□□□□ -0.43
PTCH1-203ENST00000375274 PAGR1Q9BTK6 254 aa12.39□□□□□ -0.43
PTCH1-203ENST00000375274 FUT8Q9BYC5 575 aa12.39□□□□□ -0.43
PTCH1-203ENST00000375274 CD209Q9NNX6 404 aa12.39□□□□□ -0.43
PTCH1-203ENST00000375274 ADAM22Q9P0K1 906 aa12.39□□□□□ -0.43
PTCH1-203ENST00000375274 INO80B-WBP1J3KQ70 363 aa12.39□□□□□ -0.43
PTCH1-203ENST00000375274 IPO5O00410 1097 aaKnown RBP12.39□□□□□ -0.43
PTCH1-203ENST00000375274 FTLP02792 175 aaPredicted RBP12.39□□□□□ -0.43
PTCH1-203ENST00000375274 CD58P19256 250 aa12.39□□□□□ -0.43
PTCH1-203ENST00000375274 MDH1P40925 334 aaKnown RBP12.39□□□□□ -0.43
PTCH1-203ENST00000375274 GIMAP8Q8ND71 665 aaPredicted RBP12.39□□□□□ -0.43
PTCH1-203ENST00000375274 INO80BQ9C086 356 aaPredicted RBP12.39□□□□□ -0.43
PTCH1-203ENST00000375274 EPB41L4AQ9HCS5 686 aaPredicted RBP12.39□□□□□ -0.43
PTCH1-203ENST00000375274 AFG3L2Q9Y4W6 797 aa12.39□□□□□ -0.43
PTCH1-203ENST00000375274 SCINQ9Y6U3 715 aa12.39□□□□□ -0.43
PTCH1-203ENST00000375274 GPC4O75487 556 aa12.39□□□□□ -0.43
PTCH1-203ENST00000375274 CSF1RP07333 972 aa12.39□□□□□ -0.43
PTCH1-203ENST00000375274 RFC1P35251 1148 aaPredicted RBP12.39□□□□□ -0.43
PTCH1-203ENST00000375274 PDIA5Q14554 519 aa12.39□□□□□ -0.43
PTCH1-203ENST00000375274 RNF207Q6ZRF8 634 aa12.39□□□□□ -0.43
PTCH1-203ENST00000375274 ZNF512BQ96KM6 892 aaPredicted RBP12.39□□□□□ -0.43
PTCH1-203ENST00000375274 COA1Q9GZY4 146 aa12.39□□□□□ -0.43
PTCH1-203ENST00000375274 CPS1P31327 1500 aa12.39□□□□□ -0.43
PTCH1-203ENST00000375274 KRT14P02533 472 aa12.39□□□□□ -0.43
PTCH1-203ENST00000375274 IRAK1P51617 712 aa12.39□□□□□ -0.43
PTCH1-203ENST00000375274 CCDC93Q567U6 631 aa12.39□□□□□ -0.43
PTCH1-203ENST00000375274 MUM1L1Q5H9M0 696 aa12.39□□□□□ -0.43
PTCH1-203ENST00000375274 C12orf60Q5U649 245 aa12.39□□□□□ -0.43
PTCH1-203ENST00000375274 ZNF746Q6NUN9 644 aaPredicted RBP12.39□□□□□ -0.43
PTCH1-203ENST00000375274 DARS2Q6PI48 645 aaKnown RBP12.39□□□□□ -0.43
PTCH1-203ENST00000375274 KAZALD1Q96I82 304 aa12.39□□□□□ -0.43
PTCH1-203ENST00000375274 CDHR1Q96JP9 859 aa12.39□□□□□ -0.43
PTCH1-203ENST00000375274 DLC1Q96QB1 1528 aa12.39□□□□□ -0.43
PTCH1-203ENST00000375274 CCT8L2Q96SF2 557 aa12.39□□□□□ -0.43
PTCH1-203ENST00000375274 IFT122Q9HBG6 1241 aa12.39□□□□□ -0.43
PTCH1-203ENST00000375274 CEMIPQ8WUJ3 1361 aa12.38□□□□□ -0.43
PTCH1-203ENST00000375274 H0Y3Z8 333 aa12.38□□□□□ -0.43
PTCH1-203ENST00000375274 PLS3P13797 630 aa12.38□□□□□ -0.43
PTCH1-203ENST00000375274 EIF2AK2P19525 551 aaKnown RBP12.38□□□□□ -0.43
PTCH1-203ENST00000375274 HSP90AA5PQ58FG0 334 aa12.38□□□□□ -0.43
PTCH1-203ENST00000375274 FAM149B1Q96BN6 582 aa12.38□□□□□ -0.43
PTCH1-203ENST00000375274 RNPC3Q96LT9 517 aaKnown RBP12.38□□□□□ -0.43
PTCH1-203ENST00000375274 GINM1Q9NU53 330 aa12.38□□□□□ -0.43
PTCH1-203ENST00000375274 FHOD1Q9Y613 1164 aa12.38□□□□□ -0.43
PTCH1-203ENST00000375274 ABCD1P33897 745 aa12.38□□□□□ -0.43
PTCH1-203ENST00000375274 PDIA6Q15084 440 aa12.38□□□□□ -0.43
PTCH1-203ENST00000375274 MTERF2Q49AM1 385 aa12.38□□□□□ -0.43
PTCH1-203ENST00000375274 CCDC137Q6PK04 289 aaKnown RBP12.38□□□□□ -0.43
PTCH1-203ENST00000375274 NSUN4Q96CB9 384 aaKnown RBP12.38□□□□□ -0.43
PTCH1-203ENST00000375274 C7orf25Q9BPX7 421 aa12.38□□□□□ -0.43
PTCH1-203ENST00000375274 KLC4Q9NSK0 619 aa12.38□□□□□ -0.43
PTCH1-203ENST00000375274 TJP3O95049 919 aa12.38□□□□□ -0.43
PTCH1-203ENST00000375274 GH2P01242 217 aa12.38□□□□□ -0.43
PTCH1-203ENST00000375274 CAV1Q03135 178 aa12.38□□□□□ -0.43
PTCH1-203ENST00000375274 FAM160B1Q5W0V3 765 aa12.38□□□□□ -0.43
PTCH1-203ENST00000375274 FLAD1Q8NFF5 587 aa12.38□□□□□ -0.43
PTCH1-203ENST00000375274 ZNF564Q8TBZ8 553 aaPredicted RBP12.38□□□□□ -0.43
PTCH1-203ENST00000375274 DCAF4Q8WV16 495 aa12.38□□□□□ -0.43
PTCH1-203ENST00000375274 ANKRD36BP1Q96IX9 119 aa12.38□□□□□ -0.43
PTCH1-203ENST00000375274 EPN3Q9H201 632 aa12.38□□□□□ -0.43
PTCH1-203ENST00000375274 RBM12Q9NTZ6 932 aaKnown RBP12.38□□□□□ -0.43
PTCH1-203ENST00000375274 SEL1LQ9UBV2 794 aa12.38□□□□□ -0.43
PTCH1-203ENST00000375274 HPSEQ9Y251 543 aa12.38□□□□□ -0.43
PTCH1-203ENST00000375274 A0A0G2JND7 137 aa12.37□□□□□ -0.43
PTCH1-203ENST00000375274 PPP1R3GB7ZBB8 358 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms