RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 PABPC1P11940 636 aaKnown RBP5.98□□□□□ -1.45
USP48-202ENST00000374730 PRKAR2BP31323 418 aa5.98□□□□□ -1.45
USP48-202ENST00000374730 IL13P35225 146 aa5.98□□□□□ -1.45
USP48-202ENST00000374730 ADAM9Q13443 819 aa5.98□□□□□ -1.45
USP48-202ENST00000374730 NFE2L2Q16236 605 aa5.98□□□□□ -1.45
USP48-202ENST00000374730 NME9Q86XW9 330 aa5.98□□□□□ -1.45
USP48-202ENST00000374730 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.98□□□□□ -1.45
USP48-202ENST00000374730 ARRDC4Q8NCT1 418 aa5.98□□□□□ -1.45
USP48-202ENST00000374730 TTLL11Q8NHH1 800 aa5.98□□□□□ -1.45
USP48-202ENST00000374730 TSR2Q969E8 191 aaKnown RBP5.98□□□□□ -1.45
USP48-202ENST00000374730 OSBP2Q969R2 916 aa5.98□□□□□ -1.45
USP48-202ENST00000374730 COG3Q96JB2 828 aa5.98□□□□□ -1.45
USP48-202ENST00000374730 WRNIP1Q96S55 665 aa5.98□□□□□ -1.45
USP48-202ENST00000374730 BDH2Q9BUT1 245 aa5.98□□□□□ -1.45
USP48-202ENST00000374730 KRTAP9-3Q9BYQ3 159 aa5.98□□□□□ -1.45
USP48-202ENST00000374730 SLC6A20Q9NP91 592 aa5.98□□□□□ -1.45
USP48-202ENST00000374730 SMC4Q9NTJ3 1288 aa5.98□□□□□ -1.45
USP48-202ENST00000374730 HSPBP1Q9NZL4 362 aa5.98□□□□□ -1.45
USP48-202ENST00000374730 DDX19BQ9UMR2 479 aa5.98□□□□□ -1.45
USP48-202ENST00000374730 PIK3C2AO00443 1686 aa5.98□□□□□ -1.45
USP48-202ENST00000374730 CEP170BQ9Y4F5 1589 aaPredicted RBP5.97□□□□□ -1.45
USP48-202ENST00000374730 PRODHO43272 600 aa5.97□□□□□ -1.45
USP48-202ENST00000374730 MSCO60682 206 aa5.97□□□□□ -1.45
USP48-202ENST00000374730 RGS3P49796 1198 aa5.97□□□□□ -1.45
USP48-202ENST00000374730 LMOD3Q0VAK6 560 aa5.97□□□□□ -1.45
USP48-202ENST00000374730 KIZQ2M2Z5 673 aa5.97□□□□□ -1.45
USP48-202ENST00000374730 LCE5AQ5TCM9 118 aa5.97□□□□□ -1.45
USP48-202ENST00000374730 STYK1Q6J9G0 422 aa5.97□□□□□ -1.45
USP48-202ENST00000374730 TEPPQ6URK8 271 aa5.97□□□□□ -1.45
USP48-202ENST00000374730 ATF7IPQ6VMQ6 1270 aa5.97□□□□□ -1.45
USP48-202ENST00000374730 NSMFQ6X4W1 530 aa5.97□□□□□ -1.45
USP48-202ENST00000374730 DPH6Q7L8W6 267 aa5.97□□□□□ -1.45
USP48-202ENST00000374730 TRIM48Q8IWZ4 208 aa5.97□□□□□ -1.45
USP48-202ENST00000374730 FTSJ3Q8IY81 847 aaKnown RBP5.97□□□□□ -1.45
USP48-202ENST00000374730 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.97□□□□□ -1.45
USP48-202ENST00000374730 SSH1Q8WYL5 1049 aa5.97□□□□□ -1.45
USP48-202ENST00000374730 SYT3Q9BQG1 590 aa5.97□□□□□ -1.45
USP48-202ENST00000374730 RWDD1Q9H446 243 aaPredicted RBP5.97□□□□□ -1.45
USP48-202ENST00000374730 IFT57Q9NWB7 429 aa5.97□□□□□ -1.45
USP48-202ENST00000374730 ASH2LQ9UBL3 628 aa5.97□□□□□ -1.45
USP48-202ENST00000374730 TNNQ9UQP3 1299 aa5.97□□□□□ -1.45
USP48-202ENST00000374730 ANKARQ7Z5J8 1434 aa5.97□□□□□ -1.45
USP48-202ENST00000374730 CHD2O14647 1828 aaKnown RBP5.97□□□□□ -1.45
USP48-202ENST00000374730 TTC21BQ7Z4L5 1316 aa5.97□□□□□ -1.45
USP48-202ENST00000374730 CACNA1FO60840 1977 aa5.97□□□□□ -1.45
USP48-202ENST00000374730 LRRC37A3O60309 1634 aa5.96□□□□□ -1.45
USP48-202ENST00000374730 N4BP2Q86UW6 1770 aaPredicted RBP5.96□□□□□ -1.46
USP48-202ENST00000374730 PPM1GO15355 546 aaPredicted RBP5.96□□□□□ -1.46
USP48-202ENST00000374730 IPO8O15397 1037 aaKnown RBP5.96□□□□□ -1.46
USP48-202ENST00000374730 ZNF853P0CG23 659 aa5.96□□□□□ -1.46
USP48-202ENST00000374730 TRIM27P14373 513 aa5.96□□□□□ -1.46
USP48-202ENST00000374730 ZNF28P17035 718 aa5.96□□□□□ -1.46
USP48-202ENST00000374730 GRK2P25098 689 aa5.96□□□□□ -1.46
USP48-202ENST00000374730 CNR2P34972 360 aa5.96□□□□□ -1.46
USP48-202ENST00000374730 GRK3P35626 688 aa5.96□□□□□ -1.46
USP48-202ENST00000374730 GPR85P60893 370 aa5.96□□□□□ -1.46
USP48-202ENST00000374730 GNAI1P63096 354 aa5.96□□□□□ -1.46
USP48-202ENST00000374730 EFEMP1Q12805 493 aa5.96□□□□□ -1.46
USP48-202ENST00000374730 IFRD2Q12894 506 aaPredicted RBP5.96□□□□□ -1.46
USP48-202ENST00000374730 HDAC1Q13547 482 aaPredicted RBP5.96□□□□□ -1.46
USP48-202ENST00000374730 RASGRF1Q13972 1273 aa5.96□□□□□ -1.46
USP48-202ENST00000374730 NTRK3Q16288 839 aa5.96□□□□□ -1.46
USP48-202ENST00000374730 LBX2Q6XYB7 198 aa5.96□□□□□ -1.46
USP48-202ENST00000374730 TMEM209Q96SK2 561 aa5.96□□□□□ -1.46
USP48-202ENST00000374730 TBX22Q9Y458 520 aa5.96□□□□□ -1.46
USP48-202ENST00000374730 TTC21AQ8NDW8 1320 aa5.96□□□□□ -1.46
USP48-202ENST00000374730 ARHGEF10O15013 1369 aa5.95□□□□□ -1.46
USP48-202ENST00000374730 C9orf118A6NHY6 69 aa5.95□□□□□ -1.46
USP48-202ENST00000374730 CYP7B1O75881 506 aa5.95□□□□□ -1.46
USP48-202ENST00000374730 LRG1P02750 347 aa5.95□□□□□ -1.46
USP48-202ENST00000374730 PLP2Q04941 152 aa5.95□□□□□ -1.46
USP48-202ENST00000374730 KIAA2012Q0VF49 1180 aa5.95□□□□□ -1.46
USP48-202ENST00000374730 SPATS1Q496A3 300 aa5.95□□□□□ -1.46
USP48-202ENST00000374730 OTOP3Q7RTS5 596 aa5.95□□□□□ -1.46
USP48-202ENST00000374730 PRRT2Q7Z6L0 340 aaPredicted RBP5.95□□□□□ -1.46
USP48-202ENST00000374730 STK32CQ86UX6 486 aa5.95□□□□□ -1.46
USP48-202ENST00000374730 FERMT3Q86UX7 667 aa5.95□□□□□ -1.46
USP48-202ENST00000374730 FAM124AQ86V42 546 aa5.95□□□□□ -1.46
USP48-202ENST00000374730 FAM177A1Q8N128 213 aaPredicted RBP5.95□□□□□ -1.46
USP48-202ENST00000374730 PIP4K2CQ8TBX8 421 aa5.95□□□□□ -1.46
USP48-202ENST00000374730 SREK1Q8WXA9 508 aaKnown RBP5.95□□□□□ -1.46
USP48-202ENST00000374730 ARHGAP45Q92619 1136 aa5.95□□□□□ -1.46
USP48-202ENST00000374730 DRC1Q96MC2 740 aa5.95□□□□□ -1.46
USP48-202ENST00000374730 CLIC6Q96NY7 704 aa5.95□□□□□ -1.46
USP48-202ENST00000374730 SPATA9Q9BWV2 254 aa5.95□□□□□ -1.46
USP48-202ENST00000374730 JAM3Q9BX67 310 aa5.95□□□□□ -1.46
USP48-202ENST00000374730 PDGFDQ9GZP0 370 aaPredicted RBP5.95□□□□□ -1.46
USP48-202ENST00000374730 CCDC113Q9H0I3 377 aa5.95□□□□□ -1.46
USP48-202ENST00000374730 PPARGC1AQ9UBK2 798 aaKnown RBP5.95□□□□□ -1.46
USP48-202ENST00000374730 NUB1Q9Y5A7 615 aa5.95□□□□□ -1.46
USP48-202ENST00000374730 EID1Q9Y6B2 187 aa5.95□□□□□ -1.46
USP48-202ENST00000374730 DUSP10Q9Y6W6 482 aa5.95□□□□□ -1.46
USP48-202ENST00000374730 ACEP12821 1306 aa5.95□□□□□ -1.46
USP48-202ENST00000374730 KIF24Q5T7B8 1368 aa5.94□□□□□ -1.46
USP48-202ENST00000374730 MROH6A6NGR9 719 aa5.94□□□□□ -1.46
USP48-202ENST00000374730 PDPK1O15530 556 aa5.94□□□□□ -1.46
USP48-202ENST00000374730 ATP2B1P20020 1258 aa5.94□□□□□ -1.46
USP48-202ENST00000374730 HABP4Q5JVS0 413 aaKnown RBP5.94□□□□□ -1.46
USP48-202ENST00000374730 BORAQ6PGQ7 559 aa5.94□□□□□ -1.46
USP48-202ENST00000374730 KCNT2Q6UVM3 1135 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms