RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 KNOP1Q1ED39 458 aaKnown RBP17.34■□□□□ 0.37
NIPAL3-204ENST00000374399 ODR4Q5SWX8 454 aa17.34■□□□□ 0.37
NIPAL3-204ENST00000374399 KSR1Q8IVT5 923 aa17.34■□□□□ 0.37
NIPAL3-204ENST00000374399 DHX37Q8IY37 1157 aaKnown RBP17.34■□□□□ 0.37
NIPAL3-204ENST00000374399 SPATA33Q96N06 139 aa17.34■□□□□ 0.37
NIPAL3-204ENST00000374399 TIPINQ9BVW5 301 aa17.34■□□□□ 0.37
NIPAL3-204ENST00000374399 NIFKQ9BYG3 293 aaKnown RBP17.34■□□□□ 0.37
NIPAL3-204ENST00000374399 TRAF3IP3Q9Y228 551 aa17.34■□□□□ 0.37
NIPAL3-204ENST00000374399 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.34■□□□□ 0.37
NIPAL3-204ENST00000374399 TGFB1I1O43294 461 aa17.33■□□□□ 0.37
NIPAL3-204ENST00000374399 ADCY6O43306 1168 aa17.33■□□□□ 0.37
NIPAL3-204ENST00000374399 AOC2O75106 756 aa17.33■□□□□ 0.37
NIPAL3-204ENST00000374399 PLS3P13797 630 aa17.33■□□□□ 0.37
NIPAL3-204ENST00000374399 STAT5BP51692 787 aa17.33■□□□□ 0.37
NIPAL3-204ENST00000374399 GRM1Q13255 1194 aa17.33■□□□□ 0.37
NIPAL3-204ENST00000374399 TRIM50Q86XT4 487 aa17.33■□□□□ 0.37
NIPAL3-204ENST00000374399 FAM178BQ8IXR5 827 aa17.33■□□□□ 0.37
NIPAL3-204ENST00000374399 BSNDQ8WZ55 320 aa17.33■□□□□ 0.37
NIPAL3-204ENST00000374399 CNOT6LQ96LI5 555 aaKnown RBP17.33■□□□□ 0.37
NIPAL3-204ENST00000374399 RASSF10A6NK89 507 aa17.33■□□□□ 0.36
NIPAL3-204ENST00000374399 TBX2Q13207 712 aaPredicted RBP17.33■□□□□ 0.36
NIPAL3-204ENST00000374399 FILIP1Q7Z7B0 1213 aa17.33■□□□□ 0.36
NIPAL3-204ENST00000374399 CACTINQ8WUQ7 758 aaKnown RBP17.33■□□□□ 0.36
NIPAL3-204ENST00000374399 CTAGE1Q96RT6 745 aa17.33■□□□□ 0.36
NIPAL3-204ENST00000374399 VPS16Q9H269 839 aa17.33■□□□□ 0.36
NIPAL3-204ENST00000374399 EMSYQ7Z589 1322 aa17.32■□□□□ 0.36
NIPAL3-204ENST00000374399 PDXKO00764 312 aa17.32■□□□□ 0.36
NIPAL3-204ENST00000374399 KIF20AO95235 890 aa17.32■□□□□ 0.36
NIPAL3-204ENST00000374399 MAPTP10636 758 aaKnown RBP17.32■□□□□ 0.36
NIPAL3-204ENST00000374399 SMPD1P17405 629 aa17.32■□□□□ 0.36
NIPAL3-204ENST00000374399 CAP1Q01518 475 aa17.32■□□□□ 0.36
NIPAL3-204ENST00000374399 ACVR2BQ13705 512 aa17.32■□□□□ 0.36
NIPAL3-204ENST00000374399 CCL14Q16627 93 aa17.32■□□□□ 0.36
NIPAL3-204ENST00000374399 EDRF1Q3B7T1 1238 aa17.32■□□□□ 0.36
NIPAL3-204ENST00000374399 MTERF2Q49AM1 385 aa17.32■□□□□ 0.36
NIPAL3-204ENST00000374399 MIIPQ5JXC2 388 aa17.32■□□□□ 0.36
NIPAL3-204ENST00000374399 MSL3Q8N5Y2 521 aaKnown RBP17.32■□□□□ 0.36
NIPAL3-204ENST00000374399 TSG101Q99816 390 aa17.32■□□□□ 0.36
NIPAL3-204ENST00000374399 IMPACTQ9P2X3 320 aa17.32■□□□□ 0.36
NIPAL3-204ENST00000374399 PCNTO95613 3336 aa17.32■□□□□ 0.36
NIPAL3-204ENST00000374399 GOLGA6L6A8MZA4 724 aa17.31■□□□□ 0.36
NIPAL3-204ENST00000374399 ZBTB42B2RXF5 422 aa17.31■□□□□ 0.36
NIPAL3-204ENST00000374399 DGAT1O75907 488 aa17.31■□□□□ 0.36
NIPAL3-204ENST00000374399 NCKAP1LP55160 1127 aa17.31■□□□□ 0.36
NIPAL3-204ENST00000374399 FKBP3Q00688 224 aaKnown RBP17.31■□□□□ 0.36
NIPAL3-204ENST00000374399 LRMPQ12912 555 aa17.31■□□□□ 0.36
NIPAL3-204ENST00000374399 FAM102BQ5T8I3 360 aa17.31■□□□□ 0.36
NIPAL3-204ENST00000374399 ARMCX5Q6P1M9 558 aa17.31■□□□□ 0.36
NIPAL3-204ENST00000374399 PPP4R3CPQ6ZMV5 832 aa17.31■□□□□ 0.36
NIPAL3-204ENST00000374399 PAXIP1Q6ZW49 1069 aaPredicted RBP17.31■□□□□ 0.36
NIPAL3-204ENST00000374399 PLPPR4Q7Z2D5 763 aa17.31■□□□□ 0.36
NIPAL3-204ENST00000374399 EMID1Q96A84 441 aaPredicted RBP17.31■□□□□ 0.36
NIPAL3-204ENST00000374399 DRC1Q96MC2 740 aa17.31■□□□□ 0.36
NIPAL3-204ENST00000374399 CCDC43Q96MW1 224 aaKnown RBP17.31■□□□□ 0.36
NIPAL3-204ENST00000374399 TUBGCP2Q9BSJ2 902 aa17.31■□□□□ 0.36
NIPAL3-204ENST00000374399 ABHD16BQ9H3Z7 469 aa17.31■□□□□ 0.36
NIPAL3-204ENST00000374399 ST6GALNAC4Q9H4F1 302 aa17.31■□□□□ 0.36
NIPAL3-204ENST00000374399 DHX33Q9H6R0 707 aaKnown RBP17.31■□□□□ 0.36
NIPAL3-204ENST00000374399 LARSQ9P2J5 1176 aaKnown RBP17.31■□□□□ 0.36
NIPAL3-204ENST00000374399 ZKSCAN5Q9Y2L8 839 aa17.31■□□□□ 0.36
NIPAL3-204ENST00000374399 UBE4BO95155 1302 aa17.3■□□□□ 0.36
NIPAL3-204ENST00000374399 N4BP3O15049 544 aa17.3■□□□□ 0.36
NIPAL3-204ENST00000374399 NOGQ13253 232 aa17.3■□□□□ 0.36
NIPAL3-204ENST00000374399 LAMC2Q13753 1193 aa17.3■□□□□ 0.36
NIPAL3-204ENST00000374399 PRAMEF19Q5SWL8 479 aa17.3■□□□□ 0.36
NIPAL3-204ENST00000374399 FAM160B1Q5W0V3 765 aa17.3■□□□□ 0.36
NIPAL3-204ENST00000374399 ZNF784Q8NCA9 323 aaPredicted RBP17.3■□□□□ 0.36
NIPAL3-204ENST00000374399 CAPNS2Q96L46 248 aa17.3■□□□□ 0.36
NIPAL3-204ENST00000374399 ARHGAP39Q9C0H5 1083 aa17.3■□□□□ 0.36
NIPAL3-204ENST00000374399 TYW1Q9NV66 732 aaKnown RBP17.3■□□□□ 0.36
NIPAL3-204ENST00000374399 LGALS16A8MUM7 142 aa17.3■□□□□ 0.36
NIPAL3-204ENST00000374399 NOP56O00567 594 aaKnown RBP17.3■□□□□ 0.36
NIPAL3-204ENST00000374399 GH1P01241 217 aa17.3■□□□□ 0.36
NIPAL3-204ENST00000374399 PEX3P56589 373 aa17.3■□□□□ 0.36
NIPAL3-204ENST00000374399 GTF2BQ00403 316 aa17.3■□□□□ 0.36
NIPAL3-204ENST00000374399 PLCB4Q15147 1175 aa17.3■□□□□ 0.36
NIPAL3-204ENST00000374399 DEFB115Q30KQ5 88 aa17.3■□□□□ 0.36
NIPAL3-204ENST00000374399 DUSP28Q4G0W2 176 aa17.3■□□□□ 0.36
NIPAL3-204ENST00000374399 CEP135Q66GS9 1140 aa17.3■□□□□ 0.36
NIPAL3-204ENST00000374399 CREBRFQ8IUR6 639 aa17.3■□□□□ 0.36
NIPAL3-204ENST00000374399 CEP63Q96MT8 703 aa17.3■□□□□ 0.36
NIPAL3-204ENST00000374399 NTPCRQ9BSD7 190 aaKnown RBP17.3■□□□□ 0.36
NIPAL3-204ENST00000374399 ATP6V0A4Q9HBG4 840 aa17.3■□□□□ 0.36
NIPAL3-204ENST00000374399 CREBZFQ9NS37 354 aa17.3■□□□□ 0.36
NIPAL3-204ENST00000374399 ADGRA3Q8IWK6 1321 aa17.29■□□□□ 0.36
NIPAL3-204ENST00000374399 K7ENM7 598 aa17.29■□□□□ 0.36
NIPAL3-204ENST00000374399 ZNF865P0CJ78 1059 aaPredicted RBP17.29■□□□□ 0.36
NIPAL3-204ENST00000374399 MARK3P27448 753 aa17.29■□□□□ 0.36
NIPAL3-204ENST00000374399 NPTX2P47972 431 aa17.29■□□□□ 0.36
NIPAL3-204ENST00000374399 MARSP56192 900 aaKnown RBP17.29■□□□□ 0.36
NIPAL3-204ENST00000374399 RTP1P59025 263 aa17.29■□□□□ 0.36
NIPAL3-204ENST00000374399 EMC2Q15006 297 aa17.29■□□□□ 0.36
NIPAL3-204ENST00000374399 SPECC1LQ69YQ0 1117 aa17.29■□□□□ 0.36
NIPAL3-204ENST00000374399 HAUS6Q7Z4H7 955 aa17.29■□□□□ 0.36
NIPAL3-204ENST00000374399 ZSCAN30Q86W11 494 aa17.29■□□□□ 0.36
NIPAL3-204ENST00000374399 FAM114A1Q8IWE2 563 aa17.29■□□□□ 0.36
NIPAL3-204ENST00000374399 LRRC8AQ8IWT6 810 aa17.29■□□□□ 0.36
NIPAL3-204ENST00000374399 TMEM161BQ8NDZ6 487 aa17.29■□□□□ 0.36
NIPAL3-204ENST00000374399 MCPH1Q8NEM0 835 aa17.29■□□□□ 0.36
NIPAL3-204ENST00000374399 AFG1LQ8WV93 481 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms