RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 TWF2Q6IBS0 349 aaKnown RBP15.37■□□□□ 0.05
TRAF1-201ENST00000373887 OR6B3Q8NGW1 331 aa15.37■□□□□ 0.05
TRAF1-201ENST00000373887 RAET1EQ8TD07 263 aa15.37■□□□□ 0.05
TRAF1-201ENST00000373887 RPAP3Q9H6T3 665 aaPredicted RBP15.37■□□□□ 0.05
TRAF1-201ENST00000373887 LRRC4Q9HBW1 653 aa15.37■□□□□ 0.05
TRAF1-201ENST00000373887 GTPBP10A4D1E9 387 aaKnown RBP15.37■□□□□ 0.05
TRAF1-201ENST00000373887 GCFC2P16383 781 aaKnown RBP15.37■□□□□ 0.05
TRAF1-201ENST00000373887 MTMR2Q13614 643 aa15.37■□□□□ 0.05
TRAF1-201ENST00000373887 CDO1Q16878 200 aa15.37■□□□□ 0.05
TRAF1-201ENST00000373887 TRIML2Q8N7C3 387 aa15.37■□□□□ 0.05
TRAF1-201ENST00000373887 FAM133AQ8N9E0 248 aa15.37■□□□□ 0.05
TRAF1-201ENST00000373887 ANGPTL2Q9UKU9 493 aa15.37■□□□□ 0.05
TRAF1-201ENST00000373887 K7ERI5 159 aa15.37■□□□□ 0.05
TRAF1-201ENST00000373887 TRAPPC10P48553 1259 aa15.37■□□□□ 0.05
TRAF1-201ENST00000373887 DAB2P98082 770 aa15.37■□□□□ 0.05
TRAF1-201ENST00000373887 SLC39A14Q15043 492 aa15.37■□□□□ 0.05
TRAF1-201ENST00000373887 NRBF2Q96F24 287 aa15.37■□□□□ 0.05
TRAF1-201ENST00000373887 GCNT4Q9P109 453 aa15.37■□□□□ 0.05
TRAF1-201ENST00000373887 CPSF1Q10570 1443 aaKnown RBP15.37■□□□□ 0.05
TRAF1-201ENST00000373887 EIF3CLB5ME19 914 aaKnown RBP15.36■□□□□ 0.05
TRAF1-201ENST00000373887 RAP1GDS1P52306 607 aa15.36■□□□□ 0.05
TRAF1-201ENST00000373887 SLC7A5Q01650 507 aa15.36■□□□□ 0.05
TRAF1-201ENST00000373887 N4BP2L2Q92802 583 aaPredicted RBP15.36■□□□□ 0.05
TRAF1-201ENST00000373887 EIF3CQ99613 913 aaKnown RBP15.36■□□□□ 0.05
TRAF1-201ENST00000373887 POTEMA6NI47 508 aa15.36■□□□□ 0.05
TRAF1-201ENST00000373887 EPHB1P54762 984 aa15.36■□□□□ 0.05
TRAF1-201ENST00000373887 DHX9Q08211 1270 aaKnown RBP15.36■□□□□ 0.05
TRAF1-201ENST00000373887 SLMAPQ14BN4 828 aa15.36■□□□□ 0.05
TRAF1-201ENST00000373887 LRRC23Q53EV4 343 aaPredicted RBP15.36■□□□□ 0.05
TRAF1-201ENST00000373887 RHPN2Q8IUC4 686 aa15.36■□□□□ 0.05
TRAF1-201ENST00000373887 SIX6OS1Q8N1H7 587 aa15.36■□□□□ 0.05
TRAF1-201ENST00000373887 PLA2R1Q13018 1463 aa15.36■□□□□ 0.05
TRAF1-201ENST00000373887 GINM1Q9NU53 330 aa15.36■□□□□ 0.05
TRAF1-201ENST00000373887 TXLNGQ9NUQ3 528 aa15.36■□□□□ 0.05
TRAF1-201ENST00000373887 ABCC12Q96J65 1359 aa15.36■□□□□ 0.05
TRAF1-201ENST00000373887 GLI2P10070 1586 aa15.36■□□□□ 0.05
TRAF1-201ENST00000373887 TTI1O43156 1089 aa15.36■□□□□ 0.05
TRAF1-201ENST00000373887 HLA-DPA1P20036 260 aa15.36■□□□□ 0.05
TRAF1-201ENST00000373887 EPHB4P54760 987 aa15.36■□□□□ 0.05
TRAF1-201ENST00000373887 P2RX5Q93086 422 aa15.36■□□□□ 0.05
TRAF1-201ENST00000373887 GCNAQ96QF7 691 aa15.36■□□□□ 0.05
TRAF1-201ENST00000373887 EMILIN3Q9NT22 766 aa15.36■□□□□ 0.05
TRAF1-201ENST00000373887 CD2BP2O95400 341 aaKnown RBP15.36■□□□□ 0.05
TRAF1-201ENST00000373887 ARL4AP40617 200 aa15.36■□□□□ 0.05
TRAF1-201ENST00000373887 C10orf76Q5T2E6 689 aa15.36■□□□□ 0.05
TRAF1-201ENST00000373887 NOVA2Q9UNW9 492 aaKnown RBP15.36■□□□□ 0.05
TRAF1-201ENST00000373887 SUGT1Q9Y2Z0 365 aa15.36■□□□□ 0.05
TRAF1-201ENST00000373887 ADCY10Q96PN6 1610 aa15.36■□□□□ 0.05
TRAF1-201ENST00000373887 ZBTB5O15062 677 aa15.35■□□□□ 0.05
TRAF1-201ENST00000373887 ZNF18P17022 549 aa15.35■□□□□ 0.05
TRAF1-201ENST00000373887 FLOT2Q14254 428 aa15.35■□□□□ 0.05
TRAF1-201ENST00000373887 GPT2Q8TD30 523 aa15.35■□□□□ 0.05
TRAF1-201ENST00000373887 HSPH1Q92598 858 aa15.35■□□□□ 0.05
TRAF1-201ENST00000373887 ESRRAP11474 423 aaPredicted RBP15.35■□□□□ 0.05
TRAF1-201ENST00000373887 NNTQ13423 1086 aa15.35■□□□□ 0.05
TRAF1-201ENST00000373887 ARHGAP31Q2M1Z3 1444 aa15.35■□□□□ 0.05
TRAF1-201ENST00000373887 BRIP1Q9BX63 1249 aa15.35■□□□□ 0.05
TRAF1-201ENST00000373887 AP1M1Q9BXS5 423 aa15.35■□□□□ 0.05
TRAF1-201ENST00000373887 UTYO14607 1347 aa15.35■□□□□ 0.05
TRAF1-201ENST00000373887 CAPRIN1Q14444 709 aaKnown RBP15.35■□□□□ 0.05
TRAF1-201ENST00000373887 ACBD5Q5T8D3 534 aaPredicted RBP15.35■□□□□ 0.05
TRAF1-201ENST00000373887 SP8Q8IXZ3 490 aa15.35■□□□□ 0.05
TRAF1-201ENST00000373887 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.35■□□□□ 0.05
TRAF1-201ENST00000373887 TTC1Q99614 292 aa15.35■□□□□ 0.05
TRAF1-201ENST00000373887 TMEM206Q9H813 350 aa15.35■□□□□ 0.05
TRAF1-201ENST00000373887 CDC23Q9UJX2 597 aa15.35■□□□□ 0.05
TRAF1-201ENST00000373887 EXOC1LA0A1B0GW35 172 aa15.35■□□□□ 0.05
TRAF1-201ENST00000373887 IQCA1LA6NCM1 817 aa15.35■□□□□ 0.05
TRAF1-201ENST00000373887 PI4K2BG5E9Z4 385 aa15.35■□□□□ 0.05
TRAF1-201ENST00000373887 DYDC2Q96IM9 177 aa15.35■□□□□ 0.05
TRAF1-201ENST00000373887 SPATA33Q96N06 139 aa15.35■□□□□ 0.05
TRAF1-201ENST00000373887 DCP1AQ9NPI6 582 aaPredicted RBP15.35■□□□□ 0.05
TRAF1-201ENST00000373887 FCER1AP12319 257 aa15.35■□□□□ 0.05
TRAF1-201ENST00000373887 PMLP29590 882 aa15.35■□□□□ 0.05
TRAF1-201ENST00000373887 VPS72Q15906 364 aa15.35■□□□□ 0.05
TRAF1-201ENST00000373887 ZC3H12BQ5HYM0 836 aaKnown RBP15.35■□□□□ 0.05
TRAF1-201ENST00000373887 ACRBPQ8NEB7 543 aa15.35■□□□□ 0.05
TRAF1-201ENST00000373887 AK8Q96MA6 479 aa15.35■□□□□ 0.05
TRAF1-201ENST00000373887 MOSPD1Q9UJG1 213 aa15.35■□□□□ 0.05
TRAF1-201ENST00000373887 PPP6R2O75170 966 aa15.34■□□□□ 0.05
TRAF1-201ENST00000373887 KCNA1Q09470 495 aa15.34■□□□□ 0.05
TRAF1-201ENST00000373887 SWSAP1Q6NVH7 229 aa15.34■□□□□ 0.05
TRAF1-201ENST00000373887 RAPGEF5Q92565 580 aa15.34■□□□□ 0.05
TRAF1-201ENST00000373887 MAN1B1Q9UKM7 699 aa15.34■□□□□ 0.05
TRAF1-201ENST00000373887 CLTCQ00610 1675 aaKnown RBP15.34■□□□□ 0.05
TRAF1-201ENST00000373887 C16orf87Q6PH81 154 aa15.34■□□□□ 0.05
TRAF1-201ENST00000373887 DEFB132Q7Z7B7 95 aa15.34■□□□□ 0.05
TRAF1-201ENST00000373887 ZWILCHQ9H900 591 aa15.34■□□□□ 0.05
TRAF1-201ENST00000373887 NBPF26B4DH59 902 aa15.34■□□□□ 0.05
TRAF1-201ENST00000373887 TNPO2O14787 897 aaKnown RBP15.34■□□□□ 0.05
TRAF1-201ENST00000373887 ESRRBO95718 433 aa15.34■□□□□ 0.05
TRAF1-201ENST00000373887 STAT3P40763 770 aa15.34■□□□□ 0.05
TRAF1-201ENST00000373887 MFSD14CQ5VZR4 134 aa15.34■□□□□ 0.05
TRAF1-201ENST00000373887 DNAJC24Q6P3W2 148 aa15.34■□□□□ 0.05
TRAF1-201ENST00000373887 NBPF10Q6P3W6 841 aaKnown RBP15.34■□□□□ 0.05
TRAF1-201ENST00000373887 EFCAB13Q8IY85 973 aa15.34■□□□□ 0.05
TRAF1-201ENST00000373887 NBPF15Q8N660 670 aa15.34■□□□□ 0.05
TRAF1-201ENST00000373887 hCG_1984214I3L0E3 225 aa15.34■□□□□ 0.05
TRAF1-201ENST00000373887 HADHAP40939 763 aa15.34■□□□□ 0.05
TRAF1-201ENST00000373887 BPIFB4P59827 614 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms