RNA–Protein interactions for RNA: ENST00000372478.4

C9orf50-201, Transcript of chromosome 9 open reading frame 50, humanhuman

APPRIS P2 TSL 2 BASIC

Gene C9orf50, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50-201ENST00000372478 CCDC43Q96MW1 224 aaKnown RBP28.14■■■□□ 2.1
C9orf50-201ENST00000372478 NACC1Q96RE7 527 aa28.14■■■□□ 2.1
C9orf50-201ENST00000372478 FBXO2Q9UK22 296 aaPredicted RBP28.14■■■□□ 2.1
C9orf50-201ENST00000372478 KIAA1024Q9UPX6 916 aa28.14■■■□□ 2.1
C9orf50-201ENST00000372478 STK24Q9Y6E0 443 aa28.14■■■□□ 2.1
C9orf50-201ENST00000372478 PARNO95453 639 aaKnown RBP28.14■■■□□ 2.09
C9orf50-201ENST00000372478 RPLP2P05387 115 aaKnown RBP28.14■■■□□ 2.09
C9orf50-201ENST00000372478 TMOD1P28289 359 aa28.14■■■□□ 2.09
C9orf50-201ENST00000372478 POLGP54098 1239 aaPredicted RBP28.14■■■□□ 2.09
C9orf50-201ENST00000372478 MKRN4PQ13434 485 aaPredicted RBP28.14■■■□□ 2.09
C9orf50-201ENST00000372478 SLC39A14Q15043 492 aa28.14■■■□□ 2.09
C9orf50-201ENST00000372478 STK38Q15208 465 aa28.14■■■□□ 2.09
C9orf50-201ENST00000372478 IER5Q5VY09 327 aa28.14■■■□□ 2.09
C9orf50-201ENST00000372478 TDHQ8IZJ6 230 aa28.14■■■□□ 2.09
C9orf50-201ENST00000372478 NME8Q8N427 588 aa28.14■■■□□ 2.09
C9orf50-201ENST00000372478 AKT3Q9Y243 479 aa28.14■■■□□ 2.09
C9orf50-201ENST00000372478 GINS2Q9Y248 185 aa28.14■■■□□ 2.09
C9orf50-201ENST00000372478 TRPV2Q9Y5S1 764 aa28.14■■■□□ 2.09
C9orf50-201ENST00000372478 IGKV6-21A0A0C4DH24 114 aa28.13■■■□□ 2.09
C9orf50-201ENST00000372478 RARRES1P49788 294 aa28.13■■■□□ 2.09
C9orf50-201ENST00000372478 PSRC1Q6PGN9 363 aaPredicted RBP28.13■■■□□ 2.09
C9orf50-201ENST00000372478 MAP7D2Q96T17 732 aa28.13■■■□□ 2.09
C9orf50-201ENST00000372478 DDX19AQ9NUU7 478 aaKnown RBP28.13■■■□□ 2.09
C9orf50-201ENST00000372478 TRIOBPQ9H2D6 2365 aa28.12■■■□□ 2.09
C9orf50-201ENST00000372478 M0QZ92 97 aa28.12■■■□□ 2.09
C9orf50-201ENST00000372478 FGBP02675 491 aa28.12■■■□□ 2.09
C9orf50-201ENST00000372478 CXCL10P02778 98 aa28.12■■■□□ 2.09
C9orf50-201ENST00000372478 XRCC6P12956 609 aaKnown RBP eCLIP28.12■■■□□ 2.09
C9orf50-201ENST00000372478 DNM1Q05193 864 aaKnown RBP28.12■■■□□ 2.09
C9orf50-201ENST00000372478 OTOP2Q7RTS6 562 aa28.12■■■□□ 2.09
C9orf50-201ENST00000372478 LINC00301Q8NCQ3 95 aa28.12■■■□□ 2.09
C9orf50-201ENST00000372478 SLC7A3Q8WY07 619 aa28.12■■■□□ 2.09
C9orf50-201ENST00000372478 CLIC6Q96NY7 704 aa28.12■■■□□ 2.09
C9orf50-201ENST00000372478 CELF4Q9BZC1 486 aaKnown RBP28.12■■■□□ 2.09
C9orf50-201ENST00000372478 DHX33Q9H6R0 707 aaKnown RBP28.12■■■□□ 2.09
C9orf50-201ENST00000372478 PFKMP08237 780 aa28.11■■■□□ 2.09
C9orf50-201ENST00000372478 GHRP10912 638 aa28.11■■■□□ 2.09
C9orf50-201ENST00000372478 MUTP22033 750 aa28.11■■■□□ 2.09
C9orf50-201ENST00000372478 LONP1P36776 959 aaKnown RBP28.11■■■□□ 2.09
C9orf50-201ENST00000372478 RFC5P40937 340 aa28.11■■■□□ 2.09
C9orf50-201ENST00000372478 TCTN1Q2MV58 587 aa28.11■■■□□ 2.09
C9orf50-201ENST00000372478 CHAMP1Q96JM3 812 aa28.11■■■□□ 2.09
C9orf50-201ENST00000372478 ZNF668Q96K58 619 aaPredicted RBP28.11■■■□□ 2.09
C9orf50-201ENST00000372478 AK8Q96MA6 479 aa28.11■■■□□ 2.09
C9orf50-201ENST00000372478 PLIN2Q99541 437 aa28.11■■■□□ 2.09
C9orf50-201ENST00000372478 CSRNP2Q9H175 543 aa28.11■■■□□ 2.09
C9orf50-201ENST00000372478 CDHR5Q9HBB8 845 aa28.11■■■□□ 2.09
C9orf50-201ENST00000372478 PPME1Q9Y570 386 aa28.11■■■□□ 2.09
C9orf50-201ENST00000372478 SRPRBQ9Y5M8 271 aaKnown RBP28.11■■■□□ 2.09
C9orf50-201ENST00000372478 EMC2Q15006 297 aa28.1■■■□□ 2.09
C9orf50-201ENST00000372478 KIZQ2M2Z5 673 aa28.1■■■□□ 2.09
C9orf50-201ENST00000372478 SPECC1Q5M775 1068 aa28.1■■■□□ 2.09
C9orf50-201ENST00000372478 CABP7Q86V35 215 aa28.1■■■□□ 2.09
C9orf50-201ENST00000372478 PNMA5Q96PV4 448 aa28.1■■■□□ 2.09
C9orf50-201ENST00000372478 JPH2Q9BR39 696 aaPredicted RBP28.1■■■□□ 2.09
C9orf50-201ENST00000372478 DBR1Q9UK59 544 aaKnown RBP28.1■■■□□ 2.09
C9orf50-201ENST00000372478 LPIN1Q14693 890 aa28.1■■■□□ 2.09
C9orf50-201ENST00000372478 FBXO47Q5MNV8 452 aa28.1■■■□□ 2.09
C9orf50-201ENST00000372478 TMEM143Q96AN5 459 aa28.1■■■□□ 2.09
C9orf50-201ENST00000372478 RNPC3Q96LT9 517 aaKnown RBP28.1■■■□□ 2.09
C9orf50-201ENST00000372478 UBA7P41226 1012 aa28.09■■■□□ 2.09
C9orf50-201ENST00000372478 DNM2P50570 870 aa28.09■■■□□ 2.09
C9orf50-201ENST00000372478 NLRP11P59045 1033 aaKnown RBP28.09■■■□□ 2.09
C9orf50-201ENST00000372478 KCNK18Q7Z418 384 aa28.09■■■□□ 2.09
C9orf50-201ENST00000372478 GBP4Q96PP9 640 aa28.09■■■□□ 2.09
C9orf50-201ENST00000372478 XPNPEP1Q9NQW7 623 aa28.09■■■□□ 2.09
C9orf50-201ENST00000372478 SUCLA2Q9P2R7 463 aaPredicted RBP28.09■■■□□ 2.09
C9orf50-201ENST00000372478 E9PMD0 336 aa28.08■■■□□ 2.09
C9orf50-201ENST00000372478 SPTLC2O15270 562 aa28.08■■■□□ 2.09
C9orf50-201ENST00000372478 USO1O60763 962 aaKnown RBP28.08■■■□□ 2.09
C9orf50-201ENST00000372478 GPR32O75388 356 aa28.08■■■□□ 2.09
C9orf50-201ENST00000372478 YEATS4O95619 227 aa28.08■■■□□ 2.09
C9orf50-201ENST00000372478 GRB10Q13322 594 aa28.08■■■□□ 2.09
C9orf50-201ENST00000372478 USP49Q70CQ1 688 aa28.08■■■□□ 2.09
C9orf50-201ENST00000372478 KRI1Q8N9T8 703 aaKnown RBP28.08■■■□□ 2.09
C9orf50-201ENST00000372478 DBF4BQ8NFT6 615 aa28.08■■■□□ 2.09
C9orf50-201ENST00000372478 OSMRQ99650 979 aa28.08■■■□□ 2.09
C9orf50-201ENST00000372478 BHMT2Q9H2M3 363 aa28.08■■■□□ 2.09
C9orf50-201ENST00000372478 CXXC1Q9P0U4 656 aaPredicted RBP28.08■■■□□ 2.09
C9orf50-201ENST00000372478 MORC2Q9Y6X9 1032 aaPredicted RBP28.08■■■□□ 2.09
C9orf50-201ENST00000372478 KDM3AQ9Y4C1 1321 aa28.08■■■□□ 2.09
C9orf50-201ENST00000372478 A0A1W2PPC1 479 aa28.07■■■□□ 2.08
C9orf50-201ENST00000372478 ARHGEF35A5YM69 484 aa28.07■■■□□ 2.08
C9orf50-201ENST00000372478 PLEKHG4Q58EX7 1191 aa28.07■■■□□ 2.08
C9orf50-201ENST00000372478 CNKSR3Q6P9H4 555 aa28.07■■■□□ 2.08
C9orf50-201ENST00000372478 EXOC8Q8IYI6 725 aa28.07■■■□□ 2.08
C9orf50-201ENST00000372478 HERVK_113Q902F9 699 aa28.07■■■□□ 2.08
C9orf50-201ENST00000372478 EPSTI1Q96J88 318 aa28.07■■■□□ 2.08
C9orf50-201ENST00000372478 CDK5RAP3Q96JB5 506 aa28.07■■■□□ 2.08
C9orf50-201ENST00000372478 MTRQ99707 1265 aa28.07■■■□□ 2.08
C9orf50-201ENST00000372478 ATP6V0A4Q9HBG4 840 aa28.07■■■□□ 2.08
C9orf50-201ENST00000372478 TCHHQ07283 1943 aa28.07■■■□□ 2.08
C9orf50-201ENST00000372478 DGAT1O75907 488 aa28.07■■■□□ 2.08
C9orf50-201ENST00000372478 ACTN1P12814 892 aa28.07■■■□□ 2.08
C9orf50-201ENST00000372478 HYIQ5T013 277 aa28.07■■■□□ 2.08
C9orf50-201ENST00000372478 ATL3Q6DD88 541 aa28.07■■■□□ 2.08
C9orf50-201ENST00000372478 RHPN2Q8IUC4 686 aa28.07■■■□□ 2.08
C9orf50-201ENST00000372478 KSR1Q8IVT5 923 aa28.07■■■□□ 2.08
C9orf50-201ENST00000372478 TMEM40Q8WWA1 233 aa28.07■■■□□ 2.08
C9orf50-201ENST00000372478 ADAMTS10Q9H324 1103 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms