RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP29.01■■■□□ 2.24
ATPAF1-202ENST00000371937 ATP4AP20648 1035 aa29.01■■■□□ 2.23
ATPAF1-202ENST00000371937 MAP2K5Q13163 448 aa29.01■■■□□ 2.23
ATPAF1-202ENST00000371937 KIFAP3Q92845 792 aa29.01■■■□□ 2.23
ATPAF1-202ENST00000371937 EEF2KMTQ96G04 330 aa29.01■■■□□ 2.23
ATPAF1-202ENST00000371937 PCYT2Q99447 389 aa29.01■■■□□ 2.23
ATPAF1-202ENST00000371937 MYH11P35749 1972 aa29■■■□□ 2.23
ATPAF1-202ENST00000371937 ESPNB1AK53 854 aa29■■■□□ 2.23
ATPAF1-202ENST00000371937 CALUO43852 315 aaPredicted RBP29■■■□□ 2.23
ATPAF1-202ENST00000371937 SNAI1O95863 264 aaPredicted RBP29■■■□□ 2.23
ATPAF1-202ENST00000371937 CRHR2Q13324 411 aa29■■■□□ 2.23
ATPAF1-202ENST00000371937 HSDL1Q3SXM5 330 aa29■■■□□ 2.23
ATPAF1-202ENST00000371937 FAM102BQ5T8I3 360 aa29■■■□□ 2.23
ATPAF1-202ENST00000371937 TUBGCP2Q9BSJ2 902 aa29■■■□□ 2.23
ATPAF1-202ENST00000371937 NIFKQ9BYG3 293 aaKnown RBP29■■■□□ 2.23
ATPAF1-202ENST00000371937 ABHD16BQ9H3Z7 469 aa29■■■□□ 2.23
ATPAF1-202ENST00000371937 C17orf75Q9HAS0 396 aa29■■■□□ 2.23
ATPAF1-202ENST00000371937 TYW1Q9NV66 732 aaKnown RBP29■■■□□ 2.23
ATPAF1-202ENST00000371937 TEX33O43247 280 aa28.99■■■□□ 2.23
ATPAF1-202ENST00000371937 CA12O43570 354 aa28.99■■■□□ 2.23
ATPAF1-202ENST00000371937 HOXD13P35453 343 aa28.99■■■□□ 2.23
ATPAF1-202ENST00000371937 MTIF2P46199 727 aaKnown RBP28.99■■■□□ 2.23
ATPAF1-202ENST00000371937 LAMC2Q13753 1193 aa28.99■■■□□ 2.23
ATPAF1-202ENST00000371937 FAM167AQ96KS9 214 aa28.99■■■□□ 2.23
ATPAF1-202ENST00000371937 KATNBL1Q9H079 304 aa28.99■■■□□ 2.23
ATPAF1-202ENST00000371937 LGR5O75473 907 aa28.99■■■□□ 2.23
ATPAF1-202ENST00000371937 GNA14O95837 355 aa28.99■■■□□ 2.23
ATPAF1-202ENST00000371937 ALDH1A1P00352 501 aa28.99■■■□□ 2.23
ATPAF1-202ENST00000371937 GRM1Q13255 1194 aa28.99■■■□□ 2.23
ATPAF1-202ENST00000371937 PLPPR4Q7Z2D5 763 aa28.99■■■□□ 2.23
ATPAF1-202ENST00000371937 NPLOC4Q8TAT6 608 aa28.99■■■□□ 2.23
ATPAF1-202ENST00000371937 ZNF830Q96NB3 372 aaPredicted RBP28.99■■■□□ 2.23
ATPAF1-202ENST00000371937 ATP6V0A4Q9HBG4 840 aa28.99■■■□□ 2.23
ATPAF1-202ENST00000371937 HOXC6P09630 235 aa28.98■■■□□ 2.23
ATPAF1-202ENST00000371937 PRKCSHP14314 528 aaPredicted RBP28.98■■■□□ 2.23
ATPAF1-202ENST00000371937 MSNP26038 577 aaKnown RBP28.98■■■□□ 2.23
ATPAF1-202ENST00000371937 MTERF2Q49AM1 385 aa28.98■■■□□ 2.23
ATPAF1-202ENST00000371937 ZC3H3Q8IXZ2 948 aaKnown RBP28.98■■■□□ 2.23
ATPAF1-202ENST00000371937 GLG1Q92896 1179 aa28.98■■■□□ 2.23
ATPAF1-202ENST00000371937 STRA6Q9BX79 667 aa28.98■■■□□ 2.23
ATPAF1-202ENST00000371937 PDLIM7Q9NR12 457 aa28.98■■■□□ 2.23
ATPAF1-202ENST00000371937 LGALS16A8MUM7 142 aa28.97■■■□□ 2.23
ATPAF1-202ENST00000371937 CETN3O15182 167 aa28.97■■■□□ 2.23
ATPAF1-202ENST00000371937 GH1P01241 217 aa28.97■■■□□ 2.23
ATPAF1-202ENST00000371937 NOGQ13253 232 aa28.97■■■□□ 2.23
ATPAF1-202ENST00000371937 ADAM9Q13443 819 aa28.97■■■□□ 2.23
ATPAF1-202ENST00000371937 ZC2HC1CQ53FD0 456 aaPredicted RBP28.97■■■□□ 2.23
ATPAF1-202ENST00000371937 CYP4F22Q6NT55 531 aa28.97■■■□□ 2.23
ATPAF1-202ENST00000371937 CCDC150Q8NCX0 1101 aa28.97■■■□□ 2.23
ATPAF1-202ENST00000371937 COPS5Q92905 334 aa28.97■■■□□ 2.23
ATPAF1-202ENST00000371937 ST6GALNAC4Q9H4F1 302 aa28.97■■■□□ 2.23
ATPAF1-202ENST00000371937 PPME1Q9Y570 386 aa28.97■■■□□ 2.23
ATPAF1-202ENST00000371937 EMSYQ7Z589 1322 aa28.97■■■□□ 2.23
ATPAF1-202ENST00000371937 ARID2Q68CP9 1835 aa28.97■■■□□ 2.23
ATPAF1-202ENST00000371937 K7ENM7 598 aa28.97■■■□□ 2.23
ATPAF1-202ENST00000371937 RPL13P26373 211 aaKnown RBP28.97■■■□□ 2.23
ATPAF1-202ENST00000371937 PBX1P40424 430 aa28.97■■■□□ 2.23
ATPAF1-202ENST00000371937 SLC26A2P50443 739 aa28.97■■■□□ 2.23
ATPAF1-202ENST00000371937 SMTNP53814 917 aa28.97■■■□□ 2.23
ATPAF1-202ENST00000371937 RTP1P59025 263 aa28.97■■■□□ 2.23
ATPAF1-202ENST00000371937 LRRC8AQ8IWT6 810 aa28.97■■■□□ 2.23
ATPAF1-202ENST00000371937 EMID1Q96A84 441 aaPredicted RBP28.97■■■□□ 2.23
ATPAF1-202ENST00000371937 ZIC5Q96T25 663 aa28.97■■■□□ 2.23
ATPAF1-202ENST00000371937 GPRC5CQ9NQ84 441 aa28.97■■■□□ 2.23
ATPAF1-202ENST00000371937 PPP1R37O75864 691 aa28.96■■■□□ 2.23
ATPAF1-202ENST00000371937 POLGP54098 1239 aaPredicted RBP28.96■■■□□ 2.23
ATPAF1-202ENST00000371937 UBXN1Q04323 297 aa28.96■■■□□ 2.23
ATPAF1-202ENST00000371937 ARHGAP1Q07960 439 aa28.96■■■□□ 2.23
ATPAF1-202ENST00000371937 IRF5Q13568 498 aa28.96■■■□□ 2.23
ATPAF1-202ENST00000371937 ACVR2BQ13705 512 aa28.96■■■□□ 2.23
ATPAF1-202ENST00000371937 KCNF1Q9H3M0 494 aa28.96■■■□□ 2.23
ATPAF1-202ENST00000371937 KCNG1Q9UIX4 513 aa28.96■■■□□ 2.23
ATPAF1-202ENST00000371937 NR2F2P24468 414 aa28.95■■■□□ 2.23
ATPAF1-202ENST00000371937 DNM2P50570 870 aa28.95■■■□□ 2.23
ATPAF1-202ENST00000371937 PEX3P56589 373 aa28.95■■■□□ 2.23
ATPAF1-202ENST00000371937 DMP1Q13316 513 aaPredicted RBP28.95■■■□□ 2.23
ATPAF1-202ENST00000371937 CACTINQ8WUQ7 758 aaKnown RBP28.95■■■□□ 2.23
ATPAF1-202ENST00000371937 SOCS4Q8WXH5 440 aa28.95■■■□□ 2.23
ATPAF1-202ENST00000371937 NOC4LQ9BVI4 516 aaKnown RBP28.95■■■□□ 2.23
ATPAF1-202ENST00000371937 SMARCAD1Q9H4L7 1026 aa28.95■■■□□ 2.23
ATPAF1-202ENST00000371937 PES1O00541 588 aaKnown RBP28.94■■■□□ 2.22
ATPAF1-202ENST00000371937 RFC5P40937 340 aa28.94■■■□□ 2.22
ATPAF1-202ENST00000371937 ADCYAP1R1P41586 468 aa28.94■■■□□ 2.22
ATPAF1-202ENST00000371937 KCNA1Q09470 495 aa28.94■■■□□ 2.22
ATPAF1-202ENST00000371937 TMEM63BQ5T3F8 832 aa28.94■■■□□ 2.22
ATPAF1-202ENST00000371937 IQSEC1Q6DN90 963 aa28.94■■■□□ 2.22
ATPAF1-202ENST00000371937 HS2ST1Q7LGA3 356 aa28.94■■■□□ 2.22
ATPAF1-202ENST00000371937 GOLGA5Q8TBA6 731 aa28.94■■■□□ 2.22
ATPAF1-202ENST00000371937 SLC7A3Q8WY07 619 aa28.94■■■□□ 2.22
ATPAF1-202ENST00000371937 BBXQ8WY36 941 aaPredicted RBP28.94■■■□□ 2.22
ATPAF1-202ENST00000371937 USP6NLQ92738 828 aa28.94■■■□□ 2.22
ATPAF1-202ENST00000371937 TMEM206Q9H813 350 aa28.94■■■□□ 2.22
ATPAF1-202ENST00000371937 EIF2AK3Q9NZJ5 1116 aaKnown RBP28.94■■■□□ 2.22
ATPAF1-202ENST00000371937 ITIH6Q6UXX5 1313 aa28.94■■■□□ 2.22
ATPAF1-202ENST00000371937 SFPQP23246 707 aaKnown RBP eCLIP28.94■■■□□ 2.22
ATPAF1-202ENST00000371937 NCKAP1LP55160 1127 aa28.94■■■□□ 2.22
ATPAF1-202ENST00000371937 TBX2Q13207 712 aaPredicted RBP28.94■■■□□ 2.22
ATPAF1-202ENST00000371937 NFIL3Q16649 462 aa28.94■■■□□ 2.22
ATPAF1-202ENST00000371937 REM2Q8IYK8 340 aaPredicted RBP28.94■■■□□ 2.22
ATPAF1-202ENST00000371937 SPIRE2Q8WWL2 714 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms