RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 IQCF3P0C7M6 154 aa17.75■□□□□ 0.43
PFDN4-201ENST00000371419 RARRES1P49788 294 aa17.75■□□□□ 0.43
PFDN4-201ENST00000371419 POLGP54098 1239 aaPredicted RBP17.75■□□□□ 0.43
PFDN4-201ENST00000371419 MDM2Q00987 491 aaPredicted RBP17.75■□□□□ 0.43
PFDN4-201ENST00000371419 KLHL40Q2TBA0 621 aa17.75■□□□□ 0.43
PFDN4-201ENST00000371419 KIAA0319LQ8IZA0 1049 aa17.75■□□□□ 0.43
PFDN4-201ENST00000371419 NME8Q8N427 588 aa17.75■□□□□ 0.43
PFDN4-201ENST00000371419 KCTD17Q8N5Z5 321 aa17.75■□□□□ 0.43
PFDN4-201ENST00000371419 SLC7A3Q8WY07 619 aa17.75■□□□□ 0.43
PFDN4-201ENST00000371419 CALML4Q96GE6 196 aa17.75■□□□□ 0.43
PFDN4-201ENST00000371419 CHAMP1Q96JM3 812 aa17.75■□□□□ 0.43
PFDN4-201ENST00000371419 SUGCTQ9HAC7 445 aa17.75■□□□□ 0.43
PFDN4-201ENST00000371419 DNM3Q9UQ16 869 aa17.75■□□□□ 0.43
PFDN4-201ENST00000371419 LTBP2Q14767 1821 aa17.75■□□□□ 0.43
PFDN4-201ENST00000371419 IGKV6-21A0A0C4DH24 114 aa17.75■□□□□ 0.43
PFDN4-201ENST00000371419 RSPH10B2B2RC85 870 aa17.75■□□□□ 0.43
PFDN4-201ENST00000371419 PARNO95453 639 aaKnown RBP17.75■□□□□ 0.43
PFDN4-201ENST00000371419 RSPH10BP0C881 870 aa17.75■□□□□ 0.43
PFDN4-201ENST00000371419 MAGEA10P43363 369 aaPredicted RBP17.75■□□□□ 0.43
PFDN4-201ENST00000371419 FPGSQ05932 587 aa17.75■□□□□ 0.43
PFDN4-201ENST00000371419 GRB10Q13322 594 aa17.75■□□□□ 0.43
PFDN4-201ENST00000371419 SPECC1Q5M775 1068 aa17.75■□□□□ 0.43
PFDN4-201ENST00000371419 TRAF7Q6Q0C0 670 aa17.75■□□□□ 0.43
PFDN4-201ENST00000371419 LRRC71Q8N4P6 559 aa17.75■□□□□ 0.43
PFDN4-201ENST00000371419 LINC01465Q8N7H1 131 aa17.75■□□□□ 0.43
PFDN4-201ENST00000371419 SCLYQ96I15 445 aa17.75■□□□□ 0.43
PFDN4-201ENST00000371419 EPSTI1Q96J88 318 aa17.75■□□□□ 0.43
PFDN4-201ENST00000371419 PNMA5Q96PV4 448 aa17.75■□□□□ 0.43
PFDN4-201ENST00000371419 MAP7D2Q96T17 732 aa17.75■□□□□ 0.43
PFDN4-201ENST00000371419 CCSER1Q9C0I3 900 aa17.75■□□□□ 0.43
PFDN4-201ENST00000371419 DHX33Q9H6R0 707 aaKnown RBP17.75■□□□□ 0.43
PFDN4-201ENST00000371419 LMBRD1Q9NUN5 540 aa17.75■□□□□ 0.43
PFDN4-201ENST00000371419 ARHGEF35A5YM69 484 aa17.74■□□□□ 0.43
PFDN4-201ENST00000371419 CUTAO60888 179 aa17.74■□□□□ 0.43
PFDN4-201ENST00000371419 CTSHP09668 335 aa17.74■□□□□ 0.43
PFDN4-201ENST00000371419 CSF2RAP15509 400 aa17.74■□□□□ 0.43
PFDN4-201ENST00000371419 RFC2P35250 354 aa17.74■□□□□ 0.43
PFDN4-201ENST00000371419 TXLNAP40222 546 aa17.74■□□□□ 0.43
PFDN4-201ENST00000371419 ME1P48163 572 aa17.74■□□□□ 0.43
PFDN4-201ENST00000371419 DNM2P50570 870 aa17.74■□□□□ 0.43
PFDN4-201ENST00000371419 CLCN3P51790 818 aa17.74■□□□□ 0.43
PFDN4-201ENST00000371419 MRPS6P82932 125 aaKnown RBP17.74■□□□□ 0.43
PFDN4-201ENST00000371419 PPIGQ13427 754 aaKnown RBP eCLIP17.74■□□□□ 0.43
PFDN4-201ENST00000371419 FAM26DQ5JW98 314 aa17.74■□□□□ 0.43
PFDN4-201ENST00000371419 IER5Q5VY09 327 aa17.74■□□□□ 0.43
PFDN4-201ENST00000371419 USP49Q70CQ1 688 aa17.74■□□□□ 0.43
PFDN4-201ENST00000371419 RASSF8Q8NHQ8 419 aa17.74■□□□□ 0.43
PFDN4-201ENST00000371419 LEO1Q8WVC0 666 aaPredicted RBP17.74■□□□□ 0.43
PFDN4-201ENST00000371419 SYMPKQ92797 1274 aaKnown RBP17.74■□□□□ 0.43
PFDN4-201ENST00000371419 SPATA32Q96LK8 384 aa17.74■□□□□ 0.43
PFDN4-201ENST00000371419 SCAND2PQ9GZW5 306 aaPredicted RBP17.74■□□□□ 0.43
PFDN4-201ENST00000371419 EVPLQ92817 2033 aa17.74■□□□□ 0.43
PFDN4-201ENST00000371419 M0QZ92 97 aa17.73■□□□□ 0.43
PFDN4-201ENST00000371419 GAS2O43903 313 aaKnown RBP17.73■□□□□ 0.43
PFDN4-201ENST00000371419 DGAT1O75907 488 aa17.73■□□□□ 0.43
PFDN4-201ENST00000371419 EYA4O95677 639 aa17.73■□□□□ 0.43
PFDN4-201ENST00000371419 EMC2Q15006 297 aa17.73■□□□□ 0.43
PFDN4-201ENST00000371419 KARSQ15046 597 aaKnown RBP17.73■□□□□ 0.43
PFDN4-201ENST00000371419 TMEM119Q4V9L6 283 aa17.73■□□□□ 0.43
PFDN4-201ENST00000371419 PLIN2Q99541 437 aa17.73■□□□□ 0.43
PFDN4-201ENST00000371419 GDF15Q99988 308 aa17.73■□□□□ 0.43
PFDN4-201ENST00000371419 BHMT2Q9H2M3 363 aa17.73■□□□□ 0.43
PFDN4-201ENST00000371419 AKT3Q9Y243 479 aa17.73■□□□□ 0.43
PFDN4-201ENST00000371419 ARID2Q68CP9 1835 aa17.72■□□□□ 0.43
PFDN4-201ENST00000371419 TANC1Q9C0D5 1861 aa17.72■□□□□ 0.43
PFDN4-201ENST00000371419 E9PMD0 336 aa17.72■□□□□ 0.43
PFDN4-201ENST00000371419 CHRNA1P02708 482 aa17.72■□□□□ 0.43
PFDN4-201ENST00000371419 MGAT3Q09327 533 aa17.72■□□□□ 0.43
PFDN4-201ENST00000371419 TMEM62Q0P6H9 643 aa17.72■□□□□ 0.43
PFDN4-201ENST00000371419 MKRN4PQ13434 485 aaPredicted RBP17.72■□□□□ 0.43
PFDN4-201ENST00000371419 AXDND1Q5T1B0 1012 aaPredicted RBP17.72■□□□□ 0.43
PFDN4-201ENST00000371419 PRPF38BQ5VTL8 546 aaKnown RBP17.72■□□□□ 0.43
PFDN4-201ENST00000371419 KCNK18Q7Z418 384 aa17.72■□□□□ 0.43
PFDN4-201ENST00000371419 RPUSD2Q8IZ73 545 aaKnown RBP17.72■□□□□ 0.43
PFDN4-201ENST00000371419 ZNF710Q8N1W2 664 aa17.72■□□□□ 0.43
PFDN4-201ENST00000371419 MTRQ99707 1265 aa17.72■□□□□ 0.43
PFDN4-201ENST00000371419 ATP6V0A4Q9HBG4 840 aa17.72■□□□□ 0.43
PFDN4-201ENST00000371419 IL23AQ9NPF7 189 aa17.72■□□□□ 0.43
PFDN4-201ENST00000371419 BMP2KQ9NSY1 1161 aaPredicted RBP17.72■□□□□ 0.43
PFDN4-201ENST00000371419 SUCLA2Q9P2R7 463 aaPredicted RBP17.72■□□□□ 0.43
PFDN4-201ENST00000371419 CCDC39Q9UFE4 941 aa17.72■□□□□ 0.43
PFDN4-201ENST00000371419 PCDHA7Q9UN72 937 aa17.72■□□□□ 0.43
PFDN4-201ENST00000371419 TRPV2Q9Y5S1 764 aa17.72■□□□□ 0.43
PFDN4-201ENST00000371419 CDY2AQ9Y6F7 541 aa17.72■□□□□ 0.43
PFDN4-201ENST00000371419 USO1O60763 962 aaKnown RBP17.71■□□□□ 0.43
PFDN4-201ENST00000371419 PRPF40AO75400 957 aaKnown RBP17.71■□□□□ 0.43
PFDN4-201ENST00000371419 MBD3O95983 291 aa17.71■□□□□ 0.43
PFDN4-201ENST00000371419 VTNP04004 478 aa17.71■□□□□ 0.43
PFDN4-201ENST00000371419 PLCG1P19174 1290 aa17.71■□□□□ 0.43
PFDN4-201ENST00000371419 DRP2Q13474 957 aa17.71■□□□□ 0.43
PFDN4-201ENST00000371419 MBTPS1Q14703 1052 aa17.71■□□□□ 0.43
PFDN4-201ENST00000371419 CSPP1Q1MSJ5 1256 aa17.71■□□□□ 0.43
PFDN4-201ENST00000371419 PADI6Q6TGC4 694 aa17.71■□□□□ 0.43
PFDN4-201ENST00000371419 TCP11Q8WWU5 503 aa17.71■□□□□ 0.43
PFDN4-201ENST00000371419 CELF4Q9BZC1 486 aaKnown RBP17.71■□□□□ 0.43
PFDN4-201ENST00000371419 PFKMP08237 780 aa17.7■□□□□ 0.42
PFDN4-201ENST00000371419 CDC42EP1Q00587 391 aa17.7■□□□□ 0.42
PFDN4-201ENST00000371419 GPNMBQ14956 572 aa17.7■□□□□ 0.42
PFDN4-201ENST00000371419 DEFB128Q7Z7B8 93 aa17.7■□□□□ 0.42
PFDN4-201ENST00000371419 MCPH1Q8NEM0 835 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms