RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 GSG1L2A8MUP6 293 aa18.37■□□□□ 0.53
PTP4A1-201ENST00000370651 MED7O43513 233 aa18.37■□□□□ 0.53
PTP4A1-201ENST00000370651 FCER1AP12319 257 aa18.37■□□□□ 0.53
PTP4A1-201ENST00000370651 ITKQ08881 620 aa18.37■□□□□ 0.53
PTP4A1-201ENST00000370651 CPVLQ9H3G5 476 aa18.37■□□□□ 0.53
PTP4A1-201ENST00000370651 NMT2O60551 498 aa18.37■□□□□ 0.53
PTP4A1-201ENST00000370651 GDF11O95390 407 aa18.37■□□□□ 0.53
PTP4A1-201ENST00000370651 ABCD1P33897 745 aa18.37■□□□□ 0.53
PTP4A1-201ENST00000370651 AP3B2Q13367 1082 aa18.37■□□□□ 0.53
PTP4A1-201ENST00000370651 TMED1Q13445 227 aa18.37■□□□□ 0.53
PTP4A1-201ENST00000370651 KNOP1Q1ED39 458 aaKnown RBP18.37■□□□□ 0.53
PTP4A1-201ENST00000370651 SUSD4Q5VX71 490 aa18.37■□□□□ 0.53
PTP4A1-201ENST00000370651 SNAP23O00161 211 aa18.37■□□□□ 0.53
PTP4A1-201ENST00000370651 DNAJC8O75937 253 aaPredicted RBP18.37■□□□□ 0.53
PTP4A1-201ENST00000370651 CNGA1P29973 690 aa18.37■□□□□ 0.53
PTP4A1-201ENST00000370651 TFAMQ00059 246 aaKnown RBP18.37■□□□□ 0.53
PTP4A1-201ENST00000370651 FAM160B1Q5W0V3 765 aa18.37■□□□□ 0.53
PTP4A1-201ENST00000370651 NIM1KQ8IY84 436 aa18.37■□□□□ 0.53
PTP4A1-201ENST00000370651 HNRNPLLQ8WVV9 542 aaKnown RBP18.37■□□□□ 0.53
PTP4A1-201ENST00000370651 RBM41Q96IZ5 413 aaKnown RBP18.37■□□□□ 0.53
PTP4A1-201ENST00000370651 ADAM22Q9P0K1 906 aa18.37■□□□□ 0.53
PTP4A1-201ENST00000370651 NOD1Q9Y239 953 aa18.37■□□□□ 0.53
PTP4A1-201ENST00000370651 CD58P19256 250 aa18.36■□□□□ 0.53
PTP4A1-201ENST00000370651 HACE1Q8IYU2 909 aa18.36■□□□□ 0.53
PTP4A1-201ENST00000370651 PIGOQ8TEQ8 1089 aa18.36■□□□□ 0.53
PTP4A1-201ENST00000370651 FAM149B1Q96BN6 582 aa18.36■□□□□ 0.53
PTP4A1-201ENST00000370651 BSDC1Q9NW68 430 aaPredicted RBP18.36■□□□□ 0.53
PTP4A1-201ENST00000370651 NXF1Q9UBU9 619 aaKnown RBP18.36■□□□□ 0.53
PTP4A1-201ENST00000370651 MID2Q9UJV3 735 aa18.36■□□□□ 0.53
PTP4A1-201ENST00000370651 IRAK1P51617 712 aa18.36■□□□□ 0.53
PTP4A1-201ENST00000370651 MDM2Q00987 491 aaPredicted RBP18.36■□□□□ 0.53
PTP4A1-201ENST00000370651 CDR2Q01850 454 aa18.36■□□□□ 0.53
PTP4A1-201ENST00000370651 BYSLQ13895 437 aaKnown RBP18.36■□□□□ 0.53
PTP4A1-201ENST00000370651 DHX34Q14147 1143 aaKnown RBP18.36■□□□□ 0.53
PTP4A1-201ENST00000370651 SUDS3Q9H7L9 328 aaPredicted RBP18.36■□□□□ 0.53
PTP4A1-201ENST00000370651 ZNF609O15014 1411 aa18.36■□□□□ 0.53
PTP4A1-201ENST00000370651 ADGRL3Q9HAR2 1447 aa18.36■□□□□ 0.53
PTP4A1-201ENST00000370651 ZBED1O96006 694 aa18.36■□□□□ 0.53
PTP4A1-201ENST00000370651 APOEP02649 317 aa18.36■□□□□ 0.53
PTP4A1-201ENST00000370651 SRGNP10124 158 aa18.36■□□□□ 0.53
PTP4A1-201ENST00000370651 STAT2P52630 851 aa18.36■□□□□ 0.53
PTP4A1-201ENST00000370651 DRAP1Q14919 205 aaPredicted RBP18.36■□□□□ 0.53
PTP4A1-201ENST00000370651 TRIML2Q8N7C3 387 aa18.36■□□□□ 0.53
PTP4A1-201ENST00000370651 NOA1Q8NC60 698 aaKnown RBP18.36■□□□□ 0.53
PTP4A1-201ENST00000370651 RFFLQ8WZ73 363 aa18.36■□□□□ 0.53
PTP4A1-201ENST00000370651 TRIM10Q9UDY6 481 aa18.36■□□□□ 0.53
PTP4A1-201ENST00000370651 PRPSAP2O60256 369 aa18.36■□□□□ 0.53
PTP4A1-201ENST00000370651 RAD23BP54727 409 aa18.36■□□□□ 0.53
PTP4A1-201ENST00000370651 CCDC137Q6PK04 289 aaKnown RBP18.36■□□□□ 0.53
PTP4A1-201ENST00000370651 ADSSL1Q8N142 457 aa18.36■□□□□ 0.53
PTP4A1-201ENST00000370651 DEPDC1BQ8WUY9 529 aa18.36■□□□□ 0.53
PTP4A1-201ENST00000370651 IL25Q9H293 177 aa18.36■□□□□ 0.53
PTP4A1-201ENST00000370651 DCTN4Q9UJW0 460 aa18.36■□□□□ 0.53
PTP4A1-201ENST00000370651 HOXA13P31271 388 aaPredicted RBP18.35■□□□□ 0.53
PTP4A1-201ENST00000370651 ARL4AP40617 200 aa18.35■□□□□ 0.53
PTP4A1-201ENST00000370651 DPYDQ12882 1025 aa18.35■□□□□ 0.53
PTP4A1-201ENST00000370651 ARMC2Q8NEN0 867 aa18.35■□□□□ 0.53
PTP4A1-201ENST00000370651 GRAMD1AQ96CP6 724 aa18.35■□□□□ 0.53
PTP4A1-201ENST00000370651 DYDC2Q96IM9 177 aa18.35■□□□□ 0.53
PTP4A1-201ENST00000370651 IPO11Q9UI26 975 aaKnown RBP18.35■□□□□ 0.53
PTP4A1-201ENST00000370651 CPDO75976 1380 aa18.35■□□□□ 0.53
PTP4A1-201ENST00000370651 TFDP1Q14186 410 aa18.35■□□□□ 0.53
PTP4A1-201ENST00000370651 ENGASEQ8NFI3 743 aa18.35■□□□□ 0.53
PTP4A1-201ENST00000370651 ZNF564Q8TBZ8 553 aaPredicted RBP18.35■□□□□ 0.53
PTP4A1-201ENST00000370651 OSBPL1AQ9BXW6 950 aa18.35■□□□□ 0.53
PTP4A1-201ENST00000370651 MRPL46Q9H2W6 279 aaKnown RBP18.35■□□□□ 0.53
PTP4A1-201ENST00000370651 BARHL2Q9NY43 387 aa18.35■□□□□ 0.53
PTP4A1-201ENST00000370651 PSMD14O00487 310 aa18.35■□□□□ 0.53
PTP4A1-201ENST00000370651 POLD1P28340 1107 aa18.35■□□□□ 0.53
PTP4A1-201ENST00000370651 PLA2G4AP47712 749 aa18.35■□□□□ 0.53
PTP4A1-201ENST00000370651 GCLMP48507 274 aa18.35■□□□□ 0.53
PTP4A1-201ENST00000370651 ZBTB17Q13105 803 aa18.35■□□□□ 0.53
PTP4A1-201ENST00000370651 ANLNQ9NQW6 1124 aa18.35■□□□□ 0.53
PTP4A1-201ENST00000370651 CLTCL1P53675 1640 aa18.35■□□□□ 0.53
PTP4A1-201ENST00000370651 POTEB3A0JP26 581 aa18.34■□□□□ 0.53
PTP4A1-201ENST00000370651 ZNF233A6NK53 670 aa18.34■□□□□ 0.53
PTP4A1-201ENST00000370651 POTECB2RU33 542 aa18.34■□□□□ 0.53
PTP4A1-201ENST00000370651 GRM4Q14833 912 aa18.34■□□□□ 0.53
PTP4A1-201ENST00000370651 HLFQ16534 295 aa18.34■□□□□ 0.53
PTP4A1-201ENST00000370651 RSBN1LQ6PCB5 846 aaPredicted RBP18.34■□□□□ 0.53
PTP4A1-201ENST00000370651 POTEBQ6S5H4 581 aa18.34■□□□□ 0.53
PTP4A1-201ENST00000370651 TRIM59Q8IWR1 403 aa18.34■□□□□ 0.53
PTP4A1-201ENST00000370651 USP17L5A8MUK1 530 aa18.34■□□□□ 0.53
PTP4A1-201ENST00000370651 SRGAP2BP0DMP2 458 aa18.34■□□□□ 0.53
PTP4A1-201ENST00000370651 DEUP1Q05D60 604 aa18.34■□□□□ 0.53
PTP4A1-201ENST00000370651 MKRN3Q13064 507 aaKnown RBP18.34■□□□□ 0.53
PTP4A1-201ENST00000370651 SPOPLQ6IQ16 392 aa18.34■□□□□ 0.53
PTP4A1-201ENST00000370651 GLYCTKQ8IVS8 523 aa18.34■□□□□ 0.53
PTP4A1-201ENST00000370651 MS4A14Q96JA4 679 aa18.34■□□□□ 0.53
PTP4A1-201ENST00000370651 NUDCD1Q96RS6 583 aa18.34■□□□□ 0.53
PTP4A1-201ENST00000370651 DHX36Q9H2U1 1008 aaKnown RBP18.34■□□□□ 0.53
PTP4A1-201ENST00000370651 YY1AP1Q9H869 796 aa18.34■□□□□ 0.53
PTP4A1-201ENST00000370651 TTI1O43156 1089 aa18.34■□□□□ 0.53
PTP4A1-201ENST00000370651 FTLP02792 175 aaPredicted RBP18.34■□□□□ 0.53
PTP4A1-201ENST00000370651 NAALADL2Q58DX5 795 aa18.34■□□□□ 0.53
PTP4A1-201ENST00000370651 C1orf146Q5VVC0 180 aa18.34■□□□□ 0.53
PTP4A1-201ENST00000370651 OR6B2Q6IFH4 312 aa18.34■□□□□ 0.53
PTP4A1-201ENST00000370651 LRIG3Q6UXM1 1119 aa18.34■□□□□ 0.53
PTP4A1-201ENST00000370651 XXYLT1Q8NBI6 393 aa18.34■□□□□ 0.53
PTP4A1-201ENST00000370651 DCP1AQ9NPI6 582 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms