RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 MCTP2Q6DN12 878 aa16.75■□□□□ 0.27
LMO4-201ENST00000370542 ABHD15Q6UXT9 468 aa16.75■□□□□ 0.27
LMO4-201ENST00000370542 Q6ZUG5 572 aa16.75■□□□□ 0.27
LMO4-201ENST00000370542 FBXO22Q8NEZ5 403 aa16.75■□□□□ 0.27
LMO4-201ENST00000370542 MRPL38Q96DV4 380 aaKnown RBP16.75■□□□□ 0.27
LMO4-201ENST00000370542 SDF4Q9BRK5 362 aa16.75■□□□□ 0.27
LMO4-201ENST00000370542 TM6SF1Q9BZW5 370 aa16.75■□□□□ 0.27
LMO4-201ENST00000370542 AZI2Q9H6S1 392 aa16.75■□□□□ 0.27
LMO4-201ENST00000370542 TMEM260Q9NX78 707 aa16.75■□□□□ 0.27
LMO4-201ENST00000370542 PKD2L1Q9P0L9 805 aa16.75■□□□□ 0.27
LMO4-201ENST00000370542 MTUS1Q9ULD2 1270 aa16.75■□□□□ 0.27
LMO4-201ENST00000370542 C5orf42Q9H799 3197 aa16.75■□□□□ 0.27
LMO4-201ENST00000370542 KDM3AQ9Y4C1 1321 aa16.74■□□□□ 0.27
LMO4-201ENST00000370542 ZNF318Q5VUA4 2279 aa16.74■□□□□ 0.27
LMO4-201ENST00000370542 C5orf67F2Z3F1 127 aa16.74■□□□□ 0.27
LMO4-201ENST00000370542 RIOK3O14730 519 aaKnown RBP16.74■□□□□ 0.27
LMO4-201ENST00000370542 CCNE2O96020 404 aa16.74■□□□□ 0.27
LMO4-201ENST00000370542 GHRP10912 638 aa16.74■□□□□ 0.27
LMO4-201ENST00000370542 PDCP20941 246 aa16.74■□□□□ 0.27
LMO4-201ENST00000370542 CDC25BP30305 580 aa16.74■□□□□ 0.27
LMO4-201ENST00000370542 SSTR3P32745 418 aaPredicted RBP16.74■□□□□ 0.27
LMO4-201ENST00000370542 MRPS6P82932 125 aaKnown RBP16.74■□□□□ 0.27
LMO4-201ENST00000370542 APOBRQ0VD83 1088 aa16.74■□□□□ 0.27
LMO4-201ENST00000370542 COL19A1Q14993 1142 aa16.74■□□□□ 0.27
LMO4-201ENST00000370542 FOXD4L5Q5VV16 416 aaPredicted RBP16.74■□□□□ 0.27
LMO4-201ENST00000370542 TSHZ1Q6ZSZ6 1077 aa16.74■□□□□ 0.27
LMO4-201ENST00000370542 HFE2Q6ZVN8 426 aa16.74■□□□□ 0.27
LMO4-201ENST00000370542 NME8Q8N427 588 aa16.74■□□□□ 0.27
LMO4-201ENST00000370542 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.74■□□□□ 0.27
LMO4-201ENST00000370542 FOXD4L4Q8WXT5 416 aaPredicted RBP16.74■□□□□ 0.27
LMO4-201ENST00000370542 CLP1Q92989 425 aaKnown RBP16.74■□□□□ 0.27
LMO4-201ENST00000370542 ZNF689Q96CS4 500 aaPredicted RBP16.74■□□□□ 0.27
LMO4-201ENST00000370542 YME1L1Q96TA2 773 aa16.74■□□□□ 0.27
LMO4-201ENST00000370542 AGO3Q9H9G7 860 aaKnown RBP16.74■□□□□ 0.27
LMO4-201ENST00000370542 CDY2AQ9Y6F7 541 aa16.74■□□□□ 0.27
LMO4-201ENST00000370542 RALGAPA2Q2PPJ7 1873 aa16.73■□□□□ 0.27
LMO4-201ENST00000370542 SMIM35A0A1B0GVV1 85 aa16.73■□□□□ 0.27
LMO4-201ENST00000370542 KIF2AO00139 706 aaPredicted RBP16.73■□□□□ 0.27
LMO4-201ENST00000370542 ADAMTS3O15072 1205 aa16.73■□□□□ 0.27
LMO4-201ENST00000370542 RPS6KB1P23443 525 aa16.73■□□□□ 0.27
LMO4-201ENST00000370542 CIITAP33076 1130 aa16.73■□□□□ 0.27
LMO4-201ENST00000370542 IER5Q5VY09 327 aa16.73■□□□□ 0.27
LMO4-201ENST00000370542 BLOC1S2Q6QNY1 142 aa16.73■□□□□ 0.27
LMO4-201ENST00000370542 RTN4RL1Q86UN2 441 aaPredicted RBP16.73■□□□□ 0.27
LMO4-201ENST00000370542 TMEM192Q8IY95 271 aa16.73■□□□□ 0.27
LMO4-201ENST00000370542 BRF1Q92994 677 aa16.73■□□□□ 0.27
LMO4-201ENST00000370542 JAKMIP1Q96N16 626 aaKnown RBP16.73■□□□□ 0.27
LMO4-201ENST00000370542 UBE2ZQ9H832 354 aaPredicted RBP16.73■□□□□ 0.27
LMO4-201ENST00000370542 DDX19AQ9NUU7 478 aaKnown RBP16.73■□□□□ 0.27
LMO4-201ENST00000370542 IGSF9BQ9UPX0 1349 aa16.72■□□□□ 0.27
LMO4-201ENST00000370542 NLRC5Q86WI3 1866 aa16.72■□□□□ 0.27
LMO4-201ENST00000370542 MYO7AQ13402 2215 aa16.72■□□□□ 0.27
LMO4-201ENST00000370542 EDIL3O43854 480 aa16.72■□□□□ 0.27
LMO4-201ENST00000370542 UPP2O95045 317 aa16.72■□□□□ 0.27
LMO4-201ENST00000370542 TUBB4AP04350 444 aa16.72■□□□□ 0.27
LMO4-201ENST00000370542 RB1P06400 928 aa16.72■□□□□ 0.27
LMO4-201ENST00000370542 CCDC12Q8WUD4 166 aaPredicted RBP16.72■□□□□ 0.27
LMO4-201ENST00000370542 LINC01599Q8WXQ3 324 aa16.72■□□□□ 0.27
LMO4-201ENST00000370542 ZBTB10Q96DT7 871 aa16.72■□□□□ 0.27
LMO4-201ENST00000370542 MFSD14AQ96MC6 490 aa16.72■□□□□ 0.27
LMO4-201ENST00000370542 RNF26Q9BY78 433 aaPredicted RBP16.72■□□□□ 0.27
LMO4-201ENST00000370542 ZDBF2Q9HCK1 2354 aa16.72■□□□□ 0.27
LMO4-201ENST00000370542 TRIOO75962 3097 aa16.71■□□□□ 0.27
LMO4-201ENST00000370542 ZBTB42B2RXF5 422 aa16.71■□□□□ 0.27
LMO4-201ENST00000370542 IPO5O00410 1097 aaKnown RBP16.71■□□□□ 0.27
LMO4-201ENST00000370542 HBP1O60381 514 aa16.71■□□□□ 0.27
LMO4-201ENST00000370542 DGKIO75912 1065 aa16.71■□□□□ 0.27
LMO4-201ENST00000370542 IL9P15248 144 aa16.71■□□□□ 0.27
LMO4-201ENST00000370542 IFNAR1P17181 557 aa16.71■□□□□ 0.27
LMO4-201ENST00000370542 ATP4AP20648 1035 aa16.71■□□□□ 0.27
LMO4-201ENST00000370542 SYT1P21579 422 aa16.71■□□□□ 0.27
LMO4-201ENST00000370542 PTPROQ16827 1216 aa16.71■□□□□ 0.27
LMO4-201ENST00000370542 JAKMIP3Q5VZ66 844 aa16.71■□□□□ 0.27
LMO4-201ENST00000370542 MTHFD1LQ6UB35 978 aa16.71■□□□□ 0.27
LMO4-201ENST00000370542 PLA2G4DQ86XP0 818 aa16.71■□□□□ 0.27
LMO4-201ENST00000370542 CCDC60Q8IWA6 550 aaPredicted RBP16.71■□□□□ 0.27
LMO4-201ENST00000370542 PRSS33Q8NF86 280 aa16.71■□□□□ 0.27
LMO4-201ENST00000370542 ATP8B4Q8TF62 1192 aa16.71■□□□□ 0.27
LMO4-201ENST00000370542 FTHL17Q9BXU8 183 aa16.71■□□□□ 0.27
LMO4-201ENST00000370542 CELF4Q9BZC1 486 aaKnown RBP16.71■□□□□ 0.27
LMO4-201ENST00000370542 C6orf50Q9HD87 102 aa16.71■□□□□ 0.27
LMO4-201ENST00000370542 TBC1D22BQ9NU19 505 aa16.71■□□□□ 0.27
LMO4-201ENST00000370542 TRPC6Q9Y210 931 aa16.71■□□□□ 0.27
LMO4-201ENST00000370542 MAFBQ9Y5Q3 323 aaPredicted RBP16.71■□□□□ 0.27
LMO4-201ENST00000370542 TRPV2Q9Y5S1 764 aa16.71■□□□□ 0.27
LMO4-201ENST00000370542 COL1A2P08123 1366 aa16.71■□□□□ 0.27
LMO4-201ENST00000370542 GRXCR2A6NFK2 248 aa16.7■□□□□ 0.26
LMO4-201ENST00000370542 PSMA5P28066 241 aa16.7■□□□□ 0.26
LMO4-201ENST00000370542 GNA11P29992 359 aa16.7■□□□□ 0.26
LMO4-201ENST00000370542 IGBP1P78318 339 aa16.7■□□□□ 0.26
LMO4-201ENST00000370542 KRT85P78386 507 aa16.7■□□□□ 0.26
LMO4-201ENST00000370542 FGD1P98174 961 aa16.7■□□□□ 0.26
LMO4-201ENST00000370542 SETQ01105 290 aaPredicted RBP16.7■□□□□ 0.26
LMO4-201ENST00000370542 GPM6BQ13491 265 aa16.7■□□□□ 0.26
LMO4-201ENST00000370542 REXO1Q8N1G1 1221 aaKnown RBP16.7■□□□□ 0.26
LMO4-201ENST00000370542 FIBCD1Q8N539 461 aa16.7■□□□□ 0.26
LMO4-201ENST00000370542 NEK9Q8TD19 979 aa16.7■□□□□ 0.26
LMO4-201ENST00000370542 TRAPPC12Q8WVT3 735 aa16.7■□□□□ 0.26
LMO4-201ENST00000370542 LENG9Q96B70 501 aa16.7■□□□□ 0.26
LMO4-201ENST00000370542 RWDD3Q9Y3V2 267 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms