RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 ASTN1O14525 1302 aa11.85□□□□□ -0.51
LRIF1-201ENST00000369763 SHBGP04278 402 aa11.85□□□□□ -0.51
LRIF1-201ENST00000369763 STAT1P42224 750 aa11.85□□□□□ -0.51
LRIF1-201ENST00000369763 ADCY1Q08828 1119 aa11.85□□□□□ -0.51
LRIF1-201ENST00000369763 EPHA7Q15375 998 aa11.85□□□□□ -0.51
LRIF1-201ENST00000369763 BANK1Q8NDB2 785 aa11.85□□□□□ -0.51
LRIF1-201ENST00000369763 TBC1D22AQ8WUA7 517 aa11.85□□□□□ -0.51
LRIF1-201ENST00000369763 SYN2Q92777 582 aaPredicted RBP11.85□□□□□ -0.51
LRIF1-201ENST00000369763 CYFIP2Q96F07 1278 aa11.85□□□□□ -0.51
LRIF1-201ENST00000369763 ERVK-5Q9HDB9 667 aa11.85□□□□□ -0.51
LRIF1-201ENST00000369763 PNMA2Q9UL42 364 aa11.85□□□□□ -0.51
LRIF1-201ENST00000369763 F5H6K3 240 aa11.84□□□□□ -0.51
LRIF1-201ENST00000369763 CALUO43852 315 aaPredicted RBP11.84□□□□□ -0.51
LRIF1-201ENST00000369763 MARCKSL1P49006 195 aa11.84□□□□□ -0.51
LRIF1-201ENST00000369763 KLRC3Q07444 240 aa11.84□□□□□ -0.51
LRIF1-201ENST00000369763 CPLX4Q7Z7G2 160 aa11.84□□□□□ -0.51
LRIF1-201ENST00000369763 SYCP3Q8IZU3 236 aa11.84□□□□□ -0.51
LRIF1-201ENST00000369763 ERMNQ8TAM6 284 aa11.84□□□□□ -0.51
LRIF1-201ENST00000369763 DYDC2Q96IM9 177 aa11.84□□□□□ -0.51
LRIF1-201ENST00000369763 CABS1Q96KC9 395 aa11.84□□□□□ -0.51
LRIF1-201ENST00000369763 BTBD6Q96KE9 485 aa11.84□□□□□ -0.51
LRIF1-201ENST00000369763 FAM84AQ96KN4 292 aa11.84□□□□□ -0.51
LRIF1-201ENST00000369763 CCDC114Q96M63 670 aa11.84□□□□□ -0.51
LRIF1-201ENST00000369763 EIF2AK1Q9BQI3 630 aaKnown RBP11.84□□□□□ -0.51
LRIF1-201ENST00000369763 TMBIM4Q9HC24 238 aa11.84□□□□□ -0.51
LRIF1-201ENST00000369763 MLXIPLQ9NP71 852 aa11.84□□□□□ -0.51
LRIF1-201ENST00000369763 AMFRQ9UKV5 643 aa11.84□□□□□ -0.51
LRIF1-201ENST00000369763 UTP11Q9Y3A2 253 aaKnown RBP11.84□□□□□ -0.51
LRIF1-201ENST00000369763 DLEC1Q9Y238 1755 aa11.84□□□□□ -0.51
LRIF1-201ENST00000369763 GYS1P13807 737 aa11.84□□□□□ -0.51
LRIF1-201ENST00000369763 GCFC2P16383 781 aaKnown RBP11.84□□□□□ -0.51
LRIF1-201ENST00000369763 SMARCA1P28370 1054 aa11.84□□□□□ -0.51
LRIF1-201ENST00000369763 RC3H1Q5TC82 1133 aaKnown RBP11.84□□□□□ -0.51
LRIF1-201ENST00000369763 TAX1BP1Q86VP1 789 aa11.84□□□□□ -0.51
LRIF1-201ENST00000369763 CEP57Q86XR8 500 aa11.84□□□□□ -0.51
LRIF1-201ENST00000369763 ATF5Q9Y2D1 282 aaPredicted RBP11.84□□□□□ -0.51
LRIF1-201ENST00000369763 GAKO14976 1311 aa11.84□□□□□ -0.51
LRIF1-201ENST00000369763 FOXO6A8MYZ6 492 aa11.84□□□□□ -0.51
LRIF1-201ENST00000369763 FBXO11Q86XK2 927 aa11.84□□□□□ -0.51
LRIF1-201ENST00000369763 MGARPQ8TDB4 240 aa11.84□□□□□ -0.51
LRIF1-201ENST00000369763 SCFD2Q8WU76 684 aa11.84□□□□□ -0.51
LRIF1-201ENST00000369763 SLC20A1Q8WUM9 679 aa11.84□□□□□ -0.51
LRIF1-201ENST00000369763 CTNNBL1Q8WYA6 563 aaPredicted RBP11.84□□□□□ -0.51
LRIF1-201ENST00000369763 HMGB1P1B2RPK0 211 aaPredicted RBP11.83□□□□□ -0.52
LRIF1-201ENST00000369763 hCG_1984214I3L0E3 225 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 CAND2O75155 1236 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 CLSTN1O94985 981 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 CALCAP01258 141 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 HSPA9P38646 679 aaKnown RBP11.83□□□□□ -0.52
LRIF1-201ENST00000369763 SPIRE1Q08AE8 756 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 APOBEC3HQ6NTF7 200 aaKnown RBP11.83□□□□□ -0.52
LRIF1-201ENST00000369763 CCDC121Q6ZUS5 278 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 NT5DC3Q86UY8 548 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 ZNF713Q8N859 430 aaPredicted RBP11.83□□□□□ -0.52
LRIF1-201ENST00000369763 ETNPPLQ8TBG4 499 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 TEKT1Q969V4 418 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 LRRC45Q96CN5 670 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 C18orf8Q96DM3 657 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 SCLT1Q96NL6 688 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 SIX2Q9NPC8 291 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 MYH1P12882 1939 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 CCDC88AQ3V6T2 1871 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 COL14A1Q05707 1796 aaKnown RBP11.83□□□□□ -0.52
LRIF1-201ENST00000369763 PPEF1O14829 653 aaPredicted RBP11.83□□□□□ -0.52
LRIF1-201ENST00000369763 TGFB1I1O43294 461 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 GH2P01242 217 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 KCNJ1P48048 391 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 JAG1P78504 1218 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 DDR1Q08345 913 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 ORC2Q13416 577 aaPredicted RBP11.83□□□□□ -0.52
LRIF1-201ENST00000369763 OTUD6AQ7L8S5 288 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 SLFN12Q8IYM2 578 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 SYT2Q8N9I0 419 aaPredicted RBP11.83□□□□□ -0.52
LRIF1-201ENST00000369763 ZSWIM2Q8NEG5 633 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 CTTNBP2NLQ9P2B4 639 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 LAMB1P07942 1786 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 DDX60LQ5H9U9 1706 aaKnown RBP11.83□□□□□ -0.52
LRIF1-201ENST00000369763 COL22A1Q8NFW1 1626 aaPredicted RBP11.83□□□□□ -0.52
LRIF1-201ENST00000369763 IGKV6D-41A0A0C4DH26 115 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 EXOC3O60645 756 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 TNFAIP3P21580 790 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 GUCY2CP25092 1073 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 RPL13P26373 211 aaKnown RBP11.83□□□□□ -0.52
LRIF1-201ENST00000369763 RPA1P27694 616 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 MESDQ14696 234 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 IFI16Q16666 785 aaKnown RBP11.83□□□□□ -0.52
LRIF1-201ENST00000369763 EDRF1Q3B7T1 1238 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 ODR4Q5SWX8 454 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 DCAF12L1Q5VU92 463 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 MSL1Q68DK7 614 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 RINT1Q6NUQ1 792 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 NSMFQ6X4W1 530 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 FRMD5Q7Z6J6 570 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 KRT35Q92764 455 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 PBKQ96KB5 322 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 AMNQ9BXJ7 453 aa11.83□□□□□ -0.52
LRIF1-201ENST00000369763 DDX20Q9UHI6 824 aaKnown RBP11.83□□□□□ -0.52
LRIF1-201ENST00000369763 TMEM150BA6NC51 233 aa11.82□□□□□ -0.52
LRIF1-201ENST00000369763 NDUFB10O96000 172 aa11.82□□□□□ -0.52
LRIF1-201ENST00000369763 FGFR4P22455 802 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms