RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 MYH11P35749 1972 aa26.4■■□□□ 1.82
SNX3-203ENST00000368979 EIF3DO15371 548 aaKnown RBP eCLIP26.39■■□□□ 1.82
SNX3-203ENST00000368979 CDK11BP21127 795 aaKnown RBP26.39■■□□□ 1.82
SNX3-203ENST00000368979 MTERF2Q49AM1 385 aa26.39■■□□□ 1.82
SNX3-203ENST00000368979 TRIM50Q86XT4 487 aa26.39■■□□□ 1.82
SNX3-203ENST00000368979 FAM178BQ8IXR5 827 aa26.39■■□□□ 1.82
SNX3-203ENST00000368979 ZNF507Q8TCN5 953 aa26.39■■□□□ 1.82
SNX3-203ENST00000368979 XPO4Q9C0E2 1151 aaKnown RBP26.39■■□□□ 1.82
SNX3-203ENST00000368979 XPNPEP1Q9NQW7 623 aa26.39■■□□□ 1.82
SNX3-203ENST00000368979 NRBP2Q9NSY0 501 aa26.39■■□□□ 1.82
SNX3-203ENST00000368979 LARSQ9P2J5 1176 aaKnown RBP26.39■■□□□ 1.82
SNX3-203ENST00000368979 ADCY6O43306 1168 aa26.39■■□□□ 1.81
SNX3-203ENST00000368979 GCNT3O95395 438 aa26.39■■□□□ 1.81
SNX3-203ENST00000368979 SERPINC1P01008 464 aa26.39■■□□□ 1.81
SNX3-203ENST00000368979 MAPTP10636 758 aaKnown RBP26.39■■□□□ 1.81
SNX3-203ENST00000368979 XRCC5P13010 732 aaKnown RBP26.39■■□□□ 1.81
SNX3-203ENST00000368979 PLS3P13797 630 aa26.39■■□□□ 1.81
SNX3-203ENST00000368979 CYP2C19P33261 490 aa26.39■■□□□ 1.81
SNX3-203ENST00000368979 SLC26A2P50443 739 aa26.39■■□□□ 1.81
SNX3-203ENST00000368979 TARBP2Q15633 366 aaKnown RBP26.39■■□□□ 1.81
SNX3-203ENST00000368979 APTXQ7Z2E3 356 aaKnown RBP26.39■■□□□ 1.81
SNX3-203ENST00000368979 ZNF720Q7Z2F6 126 aa26.39■■□□□ 1.81
SNX3-203ENST00000368979 IRF2BP1Q8IU81 584 aa26.39■■□□□ 1.81
SNX3-203ENST00000368979 NELFCDQ8IXH7 590 aa26.39■■□□□ 1.81
SNX3-203ENST00000368979 CSGALNACT2Q8N6G5 542 aa26.39■■□□□ 1.81
SNX3-203ENST00000368979 MCPH1Q8NEM0 835 aa26.39■■□□□ 1.81
SNX3-203ENST00000368979 GLG1Q92896 1179 aa26.39■■□□□ 1.81
SNX3-203ENST00000368979 SMARCAD1Q9H4L7 1026 aa26.39■■□□□ 1.81
SNX3-203ENST00000368979 ATP6V0A4Q9HBG4 840 aa26.39■■□□□ 1.81
SNX3-203ENST00000368979 GPRC5CQ9NQ84 441 aa26.39■■□□□ 1.81
SNX3-203ENST00000368979 RNF186Q9NXI6 227 aa26.39■■□□□ 1.81
SNX3-203ENST00000368979 UBE4BO95155 1302 aa26.38■■□□□ 1.81
SNX3-203ENST00000368979 NMT1P30419 496 aaKnown RBP26.38■■□□□ 1.81
SNX3-203ENST00000368979 SP3Q02447 781 aa26.38■■□□□ 1.81
SNX3-203ENST00000368979 SPAG1Q07617 926 aa26.38■■□□□ 1.81
SNX3-203ENST00000368979 PRAMEF19Q5SWL8 479 aa26.38■■□□□ 1.81
SNX3-203ENST00000368979 BBXQ8WY36 941 aaPredicted RBP26.38■■□□□ 1.81
SNX3-203ENST00000368979 TSG101Q99816 390 aa26.38■■□□□ 1.81
SNX3-203ENST00000368979 STRA6Q9BX79 667 aa26.38■■□□□ 1.81
SNX3-203ENST00000368979 SRRTQ9BXP5 876 aaKnown RBP26.38■■□□□ 1.81
SNX3-203ENST00000368979 DHX33Q9H6R0 707 aaKnown RBP26.38■■□□□ 1.81
SNX3-203ENST00000368979 PPME1Q9Y570 386 aa26.38■■□□□ 1.81
SNX3-203ENST00000368979 PRPF6O94906 941 aaKnown RBP26.37■■□□□ 1.81
SNX3-203ENST00000368979 HOXD8P13378 290 aaPredicted RBP26.37■■□□□ 1.81
SNX3-203ENST00000368979 HOXD13P35453 343 aa26.37■■□□□ 1.81
SNX3-203ENST00000368979 UBASH3AP57075 661 aa26.37■■□□□ 1.81
SNX3-203ENST00000368979 TNFAIP2Q03169 654 aa26.37■■□□□ 1.81
SNX3-203ENST00000368979 FAM102BQ5T8I3 360 aa26.37■■□□□ 1.81
SNX3-203ENST00000368979 ATP8B4Q8TF62 1192 aa26.37■■□□□ 1.81
SNX3-203ENST00000368979 AFG1LQ8WV93 481 aa26.37■■□□□ 1.81
SNX3-203ENST00000368979 KIFAP3Q92845 792 aa26.37■■□□□ 1.81
SNX3-203ENST00000368979 LIMA1Q9UHB6 759 aaKnown RBP26.37■■□□□ 1.81
SNX3-203ENST00000368979 GABRQQ9UN88 632 aa26.37■■□□□ 1.81
SNX3-203ENST00000368979 CBFA2T2O43439 604 aa26.36■■□□□ 1.81
SNX3-203ENST00000368979 PPP1R37O75864 691 aa26.36■■□□□ 1.81
SNX3-203ENST00000368979 PLCB4Q15147 1175 aa26.36■■□□□ 1.81
SNX3-203ENST00000368979 KNOP1Q1ED39 458 aaKnown RBP26.36■■□□□ 1.81
SNX3-203ENST00000368979 TCP11X2Q5H9J9 407 aa26.36■■□□□ 1.81
SNX3-203ENST00000368979 OR6J1Q8NGC5 347 aa26.36■■□□□ 1.81
SNX3-203ENST00000368979 NAP1L5Q96NT1 182 aaPredicted RBP26.36■■□□□ 1.81
SNX3-203ENST00000368979 GNEQ9Y223 722 aaKnown RBP26.36■■□□□ 1.81
SNX3-203ENST00000368979 KCNJ18B7U540 433 aa26.35■■□□□ 1.81
SNX3-203ENST00000368979 LGALS2P05162 132 aa26.35■■□□□ 1.81
SNX3-203ENST00000368979 RFC5P40937 340 aa26.35■■□□□ 1.81
SNX3-203ENST00000368979 POLGP54098 1239 aaPredicted RBP26.35■■□□□ 1.81
SNX3-203ENST00000368979 RTP1P59025 263 aa26.35■■□□□ 1.81
SNX3-203ENST00000368979 HTRA3P83110 453 aa26.35■■□□□ 1.81
SNX3-203ENST00000368979 CAP1Q01518 475 aa26.35■■□□□ 1.81
SNX3-203ENST00000368979 KCNJ12Q14500 433 aa26.35■■□□□ 1.81
SNX3-203ENST00000368979 EMC2Q15006 297 aa26.35■■□□□ 1.81
SNX3-203ENST00000368979 PPP4R3CPQ6ZMV5 832 aa26.35■■□□□ 1.81
SNX3-203ENST00000368979 STXBP4Q6ZWJ1 553 aa26.35■■□□□ 1.81
SNX3-203ENST00000368979 ST6GALNAC4Q9H4F1 302 aa26.35■■□□□ 1.81
SNX3-203ENST00000368979 C17orf75Q9HAS0 396 aa26.35■■□□□ 1.81
SNX3-203ENST00000368979 CASP8AP2Q9UKL3 1982 aa26.34■■□□□ 1.81
SNX3-203ENST00000368979 TRPA1O75762 1119 aa26.34■■□□□ 1.81
SNX3-203ENST00000368979 MARK3P27448 753 aa26.34■■□□□ 1.81
SNX3-203ENST00000368979 ALCAMQ13740 583 aa26.34■■□□□ 1.81
SNX3-203ENST00000368979 KIF22Q14807 665 aa26.34■■□□□ 1.81
SNX3-203ENST00000368979 ZC2HC1CQ53FD0 456 aaPredicted RBP26.34■■□□□ 1.81
SNX3-203ENST00000368979 LRRC55Q6ZSA7 311 aa26.34■■□□□ 1.81
SNX3-203ENST00000368979 ZC3H3Q8IXZ2 948 aaKnown RBP26.34■■□□□ 1.81
SNX3-203ENST00000368979 INTS13Q9NVM9 706 aa26.34■■□□□ 1.81
SNX3-203ENST00000368979 TRAF3IP3Q9Y228 551 aa26.34■■□□□ 1.81
SNX3-203ENST00000368979 ZMYM2Q9UBW7 1377 aa26.34■■□□□ 1.81
SNX3-203ENST00000368979 A0A1B0GTH6 734 aa26.34■■□□□ 1.81
SNX3-203ENST00000368979 LRRC10BA6NIK2 292 aa26.34■■□□□ 1.81
SNX3-203ENST00000368979 K7ENM7 598 aa26.34■■□□□ 1.81
SNX3-203ENST00000368979 MMP3P08254 477 aa26.34■■□□□ 1.81
SNX3-203ENST00000368979 EEF1GP26641 437 aaKnown RBP26.34■■□□□ 1.81
SNX3-203ENST00000368979 FLT3LGP49771 235 aa26.34■■□□□ 1.81
SNX3-203ENST00000368979 NCKAP1LP55160 1127 aa26.34■■□□□ 1.81
SNX3-203ENST00000368979 PRKCZQ05513 592 aa26.34■■□□□ 1.81
SNX3-203ENST00000368979 KRT31Q15323 416 aa26.34■■□□□ 1.81
SNX3-203ENST00000368979 EDRF1Q3B7T1 1238 aa26.34■■□□□ 1.81
SNX3-203ENST00000368979 SLC17A8Q8NDX2 589 aa26.34■■□□□ 1.81
SNX3-203ENST00000368979 CTAGE1Q96RT6 745 aa26.34■■□□□ 1.81
SNX3-203ENST00000368979 ERAP1Q9NZ08 941 aa26.34■■□□□ 1.81
SNX3-203ENST00000368979 NRBP1Q9UHY1 535 aa26.34■■□□□ 1.81
SNX3-203ENST00000368979 PCDHB13Q9Y5F0 798 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms