RNA–Protein interactions for RNA: ENST00000368912.7

SEMA6C-202, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-202ENST00000368912 PCDHA8Q9Y5H6 950 aa16.71■□□□□ 0.26
SEMA6C-202ENST00000368912 POTEMA6NI47 508 aa16.7■□□□□ 0.26
SEMA6C-202ENST00000368912 ZBTB5O15062 677 aa16.7■□□□□ 0.26
SEMA6C-202ENST00000368912 MAP7D1Q3KQU3 841 aa16.7■□□□□ 0.26
SEMA6C-202ENST00000368912 OPTNQ96CV9 577 aa16.7■□□□□ 0.26
SEMA6C-202ENST00000368912 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.7■□□□□ 0.26
SEMA6C-202ENST00000368912 AMNQ9BXJ7 453 aa16.7■□□□□ 0.26
SEMA6C-202ENST00000368912 NACA2Q9H009 215 aa16.7■□□□□ 0.26
SEMA6C-202ENST00000368912 TBC1D7Q9P0N9 293 aa16.7■□□□□ 0.26
SEMA6C-202ENST00000368912 CSADQ9Y600 493 aa16.7■□□□□ 0.26
SEMA6C-202ENST00000368912 PNMA6FA0A0J9YX94 578 aa16.7■□□□□ 0.26
SEMA6C-202ENST00000368912 HNRNPCP07910 306 aaKnown RBP eCLIP16.7■□□□□ 0.26
SEMA6C-202ENST00000368912 POTEIP0CG38 1075 aa16.7■□□□□ 0.26
SEMA6C-202ENST00000368912 POTEJP0CG39 1038 aa16.7■□□□□ 0.26
SEMA6C-202ENST00000368912 GMLQ99445 158 aa16.7■□□□□ 0.26
SEMA6C-202ENST00000368912 SH2D3AQ9BRG2 576 aa16.7■□□□□ 0.26
SEMA6C-202ENST00000368912 PCMTD2Q9NV79 361 aa16.7■□□□□ 0.26
SEMA6C-202ENST00000368912 GPRC5DQ9NZD1 345 aa16.7■□□□□ 0.26
SEMA6C-202ENST00000368912 HERC5Q9UII4 1024 aaKnown RBP16.7■□□□□ 0.26
SEMA6C-202ENST00000368912 E2F6O75461 281 aa16.69■□□□□ 0.26
SEMA6C-202ENST00000368912 SUPT3HO75486 399 aa16.69■□□□□ 0.26
SEMA6C-202ENST00000368912 NCAPHQ15003 741 aa16.69■□□□□ 0.26
SEMA6C-202ENST00000368912 GKAP1Q5VSY0 366 aaPredicted RBP16.69■□□□□ 0.26
SEMA6C-202ENST00000368912 PURBQ96QR8 312 aaKnown RBP16.69■□□□□ 0.26
SEMA6C-202ENST00000368912 JADE2Q9NQC1 790 aa16.69■□□□□ 0.26
SEMA6C-202ENST00000368912 LAMB2P55268 1798 aa16.69■□□□□ 0.26
SEMA6C-202ENST00000368912 FGRP09769 529 aa16.69■□□□□ 0.26
SEMA6C-202ENST00000368912 FAM200BP0CF97 657 aa16.69■□□□□ 0.26
SEMA6C-202ENST00000368912 MDH1P40925 334 aaKnown RBP16.69■□□□□ 0.26
SEMA6C-202ENST00000368912 TMEM154Q6P9G4 183 aa16.69■□□□□ 0.26
SEMA6C-202ENST00000368912 CCDC80Q76M96 950 aa16.69■□□□□ 0.26
SEMA6C-202ENST00000368912 GET4Q7L5D6 327 aaPredicted RBP16.69■□□□□ 0.26
SEMA6C-202ENST00000368912 NEK8Q86SG6 692 aa16.69■□□□□ 0.26
SEMA6C-202ENST00000368912 ARPC5LQ9BPX5 153 aa16.69■□□□□ 0.26
SEMA6C-202ENST00000368912 PANK4Q9NVE7 773 aa16.69■□□□□ 0.26
SEMA6C-202ENST00000368912 MEIS1O00470 390 aa16.69■□□□□ 0.26
SEMA6C-202ENST00000368912 HIRAP54198 1017 aaPredicted RBP16.69■□□□□ 0.26
SEMA6C-202ENST00000368912 CALCRLQ16602 461 aa16.69■□□□□ 0.26
SEMA6C-202ENST00000368912 DCAF15Q66K64 600 aa16.69■□□□□ 0.26
SEMA6C-202ENST00000368912 RAD9BQ6WBX8 426 aa16.69■□□□□ 0.26
SEMA6C-202ENST00000368912 SNRNP27Q8WVK2 155 aaKnown RBP16.69■□□□□ 0.26
SEMA6C-202ENST00000368912 DLGAP2Q9P1A6 1054 aa16.69■□□□□ 0.26
SEMA6C-202ENST00000368912 DCAF8L1A6NGE4 600 aa16.68■□□□□ 0.26
SEMA6C-202ENST00000368912 CKAP4Q07065 602 aaKnown RBP16.68■□□□□ 0.26
SEMA6C-202ENST00000368912 XRCC4Q13426 336 aa16.68■□□□□ 0.26
SEMA6C-202ENST00000368912 RRAGBQ5VZM2 374 aa16.68■□□□□ 0.26
SEMA6C-202ENST00000368912 NAF1Q96HR8 494 aaKnown RBP16.68■□□□□ 0.26
SEMA6C-202ENST00000368912 STK36Q9NRP7 1315 aa16.68■□□□□ 0.26
SEMA6C-202ENST00000368912 LRP5O75197 1615 aa16.68■□□□□ 0.26
SEMA6C-202ENST00000368912 TRAF5O00463 557 aa16.68■□□□□ 0.26
SEMA6C-202ENST00000368912 EIF2AK2P19525 551 aaKnown RBP16.68■□□□□ 0.26
SEMA6C-202ENST00000368912 STAT3P40763 770 aa16.68■□□□□ 0.26
SEMA6C-202ENST00000368912 SLC7A5Q01650 507 aa16.68■□□□□ 0.26
SEMA6C-202ENST00000368912 ANKRD20A2Q5SQ80 823 aa16.68■□□□□ 0.26
SEMA6C-202ENST00000368912 ANKRD20A1Q5TYW2 823 aa16.68■□□□□ 0.26
SEMA6C-202ENST00000368912 ANKRD20A3Q5VUR7 823 aa16.68■□□□□ 0.26
SEMA6C-202ENST00000368912 NANOGNBQ7Z5D8 188 aa16.68■□□□□ 0.26
SEMA6C-202ENST00000368912 SEC16BQ96JE7 1060 aa16.68■□□□□ 0.26
SEMA6C-202ENST00000368912 TRAIPQ9BWF2 469 aa16.68■□□□□ 0.26
SEMA6C-202ENST00000368912 PCDHA5Q9Y5H7 936 aa16.68■□□□□ 0.26
SEMA6C-202ENST00000368912 GMNCA6NCL1 334 aa16.68■□□□□ 0.26
SEMA6C-202ENST00000368912 C2orf54Q08AI8 447 aa16.68■□□□□ 0.26
SEMA6C-202ENST00000368912 RASIP1Q5U651 963 aa16.68■□□□□ 0.26
SEMA6C-202ENST00000368912 SLF1Q9BQI6 1058 aa16.68■□□□□ 0.26
SEMA6C-202ENST00000368912 VCXQ9H320 206 aa16.68■□□□□ 0.26
SEMA6C-202ENST00000368912 RPAP3Q9H6T3 665 aaPredicted RBP16.68■□□□□ 0.26
SEMA6C-202ENST00000368912 SUN2Q9UH99 717 aa16.68■□□□□ 0.26
SEMA6C-202ENST00000368912 SAR1BQ9Y6B6 198 aa16.68■□□□□ 0.26
SEMA6C-202ENST00000368912 DYTNA2CJ06 578 aa16.67■□□□□ 0.26
SEMA6C-202ENST00000368912 FBXL16Q8N461 479 aa16.67■□□□□ 0.26
SEMA6C-202ENST00000368912 CCDC43Q96MW1 224 aaKnown RBP16.67■□□□□ 0.26
SEMA6C-202ENST00000368912 RNF220Q5VTB9 566 aa16.67■□□□□ 0.26
SEMA6C-202ENST00000368912 KRT25Q7Z3Z0 450 aa16.67■□□□□ 0.26
SEMA6C-202ENST00000368912 CHURC1Q8WUH1 139 aa16.67■□□□□ 0.26
SEMA6C-202ENST00000368912 CLMNQ96JQ2 1002 aa16.67■□□□□ 0.26
SEMA6C-202ENST00000368912 SLC5A4Q9NY91 659 aa16.67■□□□□ 0.26
SEMA6C-202ENST00000368912 ZC3H4Q9UPT8 1303 aaKnown RBP16.67■□□□□ 0.26
SEMA6C-202ENST00000368912 CETN3O15182 167 aa16.67■□□□□ 0.26
SEMA6C-202ENST00000368912 PPP1R11O60927 126 aaPredicted RBP16.67■□□□□ 0.26
SEMA6C-202ENST00000368912 FUT4P22083 530 aa16.67■□□□□ 0.26
SEMA6C-202ENST00000368912 ZNF365Q70YC5 407 aa16.67■□□□□ 0.26
SEMA6C-202ENST00000368912 CYP2W1Q8TAV3 490 aa16.67■□□□□ 0.26
SEMA6C-202ENST00000368912 ZFAND2BQ8WV99 257 aa16.67■□□□□ 0.26
SEMA6C-202ENST00000368912 TRIM11Q96F44 468 aa16.67■□□□□ 0.26
SEMA6C-202ENST00000368912 WDR35Q9P2L0 1181 aa16.67■□□□□ 0.26
SEMA6C-202ENST00000368912 LRWD1Q9UFC0 647 aa16.67■□□□□ 0.26
SEMA6C-202ENST00000368912 CMA1P23946 247 aa16.66■□□□□ 0.26
SEMA6C-202ENST00000368912 ABL2P42684 1182 aa16.66■□□□□ 0.26
SEMA6C-202ENST00000368912 SESN3P58005 492 aa16.66■□□□□ 0.26
SEMA6C-202ENST00000368912 SIAH1Q8IUQ4 282 aa16.66■□□□□ 0.26
SEMA6C-202ENST00000368912 PRCCQ92733 491 aaPredicted RBP16.66■□□□□ 0.26
SEMA6C-202ENST00000368912 NDNQ99608 321 aa16.66■□□□□ 0.26
SEMA6C-202ENST00000368912 A6NHS1 94 aa16.66■□□□□ 0.26
SEMA6C-202ENST00000368912 IKBKBO14920 756 aa16.66■□□□□ 0.26
SEMA6C-202ENST00000368912 ARFGAP2Q8N6H7 521 aa16.66■□□□□ 0.26
SEMA6C-202ENST00000368912 SH2D4AQ9H788 454 aa16.66■□□□□ 0.26
SEMA6C-202ENST00000368912 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.66■□□□□ 0.26
SEMA6C-202ENST00000368912 NYAP2Q9P242 653 aa16.66■□□□□ 0.26
SEMA6C-202ENST00000368912 TMEM266Q2M3C6 531 aa16.66■□□□□ 0.26
SEMA6C-202ENST00000368912 IQCEQ6IPM2 695 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms