RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 C15orf41Q9Y2V0 281 aa18.93■□□□□ 0.62
CHTOP-203ENST00000368690 FAM187AA6NFU0 413 aa18.92■□□□□ 0.62
CHTOP-203ENST00000368690 BACH1O14867 736 aa18.92■□□□□ 0.62
CHTOP-203ENST00000368690 ATP2C2O75185 946 aa18.92■□□□□ 0.62
CHTOP-203ENST00000368690 GFPT2O94808 682 aa18.92■□□□□ 0.62
CHTOP-203ENST00000368690 MYCNP04198 464 aaPredicted RBP18.92■□□□□ 0.62
CHTOP-203ENST00000368690 ITGA4P13612 1032 aa18.92■□□□□ 0.62
CHTOP-203ENST00000368690 CHN1P15882 459 aa18.92■□□□□ 0.62
CHTOP-203ENST00000368690 EPS15P42566 896 aa18.92■□□□□ 0.62
CHTOP-203ENST00000368690 TRPM8Q7Z2W7 1104 aa18.92■□□□□ 0.62
CHTOP-203ENST00000368690 NT5DC3Q86UY8 548 aa18.92■□□□□ 0.62
CHTOP-203ENST00000368690 SNX29Q8TEQ0 813 aa18.92■□□□□ 0.62
CHTOP-203ENST00000368690 ATP8B4Q8TF62 1192 aa18.92■□□□□ 0.62
CHTOP-203ENST00000368690 SLC16A10Q8TF71 515 aa18.92■□□□□ 0.62
CHTOP-203ENST00000368690 FAM212AQ96EL1 285 aa18.92■□□□□ 0.62
CHTOP-203ENST00000368690 TMEM47Q9BQJ4 181 aa18.92■□□□□ 0.62
CHTOP-203ENST00000368690 TMEM109Q9BVC6 243 aa18.92■□□□□ 0.62
CHTOP-203ENST00000368690 KCNMB3Q9NPA1 279 aa18.92■□□□□ 0.62
CHTOP-203ENST00000368690 BMP2KQ9NSY1 1161 aaPredicted RBP18.92■□□□□ 0.62
CHTOP-203ENST00000368690 PANK4Q9NVE7 773 aa18.92■□□□□ 0.62
CHTOP-203ENST00000368690 PNMA2Q9UL42 364 aa18.92■□□□□ 0.62
CHTOP-203ENST00000368690 SLC26A4O43511 780 aa18.92■□□□□ 0.62
CHTOP-203ENST00000368690 CAND2O75155 1236 aa18.92■□□□□ 0.62
CHTOP-203ENST00000368690 PTENP60484 403 aa18.92■□□□□ 0.62
CHTOP-203ENST00000368690 HYIQ5T013 277 aa18.92■□□□□ 0.62
CHTOP-203ENST00000368690 VPS36Q86VN1 386 aa18.92■□□□□ 0.62
CHTOP-203ENST00000368690 NAP1L3Q99457 506 aaPredicted RBP18.92■□□□□ 0.62
CHTOP-203ENST00000368690 KCTD10Q9H3F6 313 aa18.92■□□□□ 0.62
CHTOP-203ENST00000368690 CNOT7Q9UIV1 285 aaKnown RBP18.92■□□□□ 0.62
CHTOP-203ENST00000368690 ATF5Q9Y2D1 282 aaPredicted RBP18.92■□□□□ 0.62
CHTOP-203ENST00000368690 PCDHA2Q9Y5H9 948 aa18.92■□□□□ 0.62
CHTOP-203ENST00000368690 NEBLO76041 1014 aa18.91■□□□□ 0.62
CHTOP-203ENST00000368690 AGTP01019 485 aa18.91■□□□□ 0.62
CHTOP-203ENST00000368690 H2AFZP0C0S5 128 aa18.91■□□□□ 0.62
CHTOP-203ENST00000368690 USP17L8P0C7I0 530 aa18.91■□□□□ 0.62
CHTOP-203ENST00000368690 TSPY3P0CV98 308 aa18.91■□□□□ 0.62
CHTOP-203ENST00000368690 TSPY8P0CW00 308 aa18.91■□□□□ 0.62
CHTOP-203ENST00000368690 NAA25Q14CX7 972 aa18.91■□□□□ 0.62
CHTOP-203ENST00000368690 DUPD1Q68J44 220 aa18.91■□□□□ 0.62
CHTOP-203ENST00000368690 STYK1Q6J9G0 422 aa18.91■□□□□ 0.62
CHTOP-203ENST00000368690 H2AFVQ71UI9 128 aa18.91■□□□□ 0.62
CHTOP-203ENST00000368690 CCDC65Q8IXS2 484 aa18.91■□□□□ 0.62
CHTOP-203ENST00000368690 MDM1Q8TC05 714 aa18.91■□□□□ 0.62
CHTOP-203ENST00000368690 L3MBTL3Q96JM7 780 aaPredicted RBP18.91■□□□□ 0.62
CHTOP-203ENST00000368690 ADAM7Q9H2U9 754 aa18.91■□□□□ 0.62
CHTOP-203ENST00000368690 EPB41L4BQ9H329 900 aa18.91■□□□□ 0.62
CHTOP-203ENST00000368690 ZDHHC18Q9NUE0 388 aa18.91■□□□□ 0.62
CHTOP-203ENST00000368690 SEC63Q9UGP8 760 aaKnown RBP18.91■□□□□ 0.62
CHTOP-203ENST00000368690 PRDX5P30044 214 aa18.91■□□□□ 0.62
CHTOP-203ENST00000368690 GBP1P32455 592 aa18.91■□□□□ 0.62
CHTOP-203ENST00000368690 KCNH2Q12809 1159 aa18.91■□□□□ 0.62
CHTOP-203ENST00000368690 R3HDM1Q15032 1099 aaKnown RBP18.91■□□□□ 0.62
CHTOP-203ENST00000368690 NEK9Q8TD19 979 aa18.91■□□□□ 0.62
CHTOP-203ENST00000368690 NSMCE1Q8WV22 266 aa18.91■□□□□ 0.62
CHTOP-203ENST00000368690 SPAG5Q96R06 1193 aa18.91■□□□□ 0.62
CHTOP-203ENST00000368690 STMN4Q9H169 189 aaPredicted RBP18.91■□□□□ 0.62
CHTOP-203ENST00000368690 MKNK2Q9HBH9 465 aa18.91■□□□□ 0.62
CHTOP-203ENST00000368690 CD209Q9NNX6 404 aa18.91■□□□□ 0.62
CHTOP-203ENST00000368690 ATP8A1Q9Y2Q0 1164 aa18.91■□□□□ 0.62
CHTOP-203ENST00000368690 LRRC37AA6NMS7 1700 aa18.9■□□□□ 0.62
CHTOP-203ENST00000368690 UCHL3P15374 230 aa18.9■□□□□ 0.62
CHTOP-203ENST00000368690 ZNF131P52739 623 aa18.9■□□□□ 0.62
CHTOP-203ENST00000368690 ACCSLQ4AC99 568 aa18.9■□□□□ 0.62
CHTOP-203ENST00000368690 C6orf118Q5T5N4 469 aa18.9■□□□□ 0.62
CHTOP-203ENST00000368690 BTNL9Q6UXG8 535 aa18.9■□□□□ 0.62
CHTOP-203ENST00000368690 KCNK18Q7Z418 384 aa18.9■□□□□ 0.62
CHTOP-203ENST00000368690 FRMD5Q7Z6J6 570 aa18.9■□□□□ 0.62
CHTOP-203ENST00000368690 GBP7Q8N8V2 638 aaPredicted RBP18.9■□□□□ 0.62
CHTOP-203ENST00000368690 CNKSR1Q969H4 720 aa18.9■□□□□ 0.62
CHTOP-203ENST00000368690 ZC3H12CQ9C0D7 883 aaKnown RBP18.9■□□□□ 0.62
CHTOP-203ENST00000368690 NOP53Q9NZM5 478 aaKnown RBP18.9■□□□□ 0.62
CHTOP-203ENST00000368690 USP17L3A6NCW0 530 aa18.89■□□□□ 0.62
CHTOP-203ENST00000368690 USP17L4A6NCW7 530 aa18.89■□□□□ 0.62
CHTOP-203ENST00000368690 G3V3G9 751 aa18.89■□□□□ 0.62
CHTOP-203ENST00000368690 CETN3O15182 167 aa18.89■□□□□ 0.62
CHTOP-203ENST00000368690 PMS2P54278 862 aa18.89■□□□□ 0.62
CHTOP-203ENST00000368690 ADCY2Q08462 1091 aa18.89■□□□□ 0.62
CHTOP-203ENST00000368690 GRIK3Q13003 919 aa18.89■□□□□ 0.62
CHTOP-203ENST00000368690 DHX34Q14147 1143 aaKnown RBP18.89■□□□□ 0.62
CHTOP-203ENST00000368690 DCAF8Q5TAQ9 597 aa18.89■□□□□ 0.62
CHTOP-203ENST00000368690 DENND2CQ68D51 928 aa18.89■□□□□ 0.62
CHTOP-203ENST00000368690 EP400NLQ6ZTU2 488 aa18.89■□□□□ 0.62
CHTOP-203ENST00000368690 USP17L1Q7RTZ2 530 aa18.89■□□□□ 0.62
CHTOP-203ENST00000368690 DZIP1Q86YF9 867 aaKnown RBP18.89■□□□□ 0.62
CHTOP-203ENST00000368690 ZNF444Q8N0Y2 327 aaPredicted RBP18.89■□□□□ 0.62
CHTOP-203ENST00000368690 STAMBPL1Q96FJ0 436 aa18.89■□□□□ 0.62
CHTOP-203ENST00000368690 ERP44Q9BS26 406 aa18.89■□□□□ 0.62
CHTOP-203ENST00000368690 KDM3AQ9Y4C1 1321 aa18.89■□□□□ 0.61
CHTOP-203ENST00000368690 GOLGA6L10A0A0M3HER8 536 aa18.89■□□□□ 0.61
CHTOP-203ENST00000368690 LIN7AO14910 233 aaPredicted RBP18.89■□□□□ 0.61
CHTOP-203ENST00000368690 PPP1R12BO60237 982 aaPredicted RBP18.89■□□□□ 0.61
CHTOP-203ENST00000368690 PPP2R5AQ15172 486 aa18.89■□□□□ 0.61
CHTOP-203ENST00000368690 C15orf52Q6ZUT6 534 aaKnown RBP18.89■□□□□ 0.61
CHTOP-203ENST00000368690 NT5C3AQ9H0P0 336 aa18.89■□□□□ 0.61
CHTOP-203ENST00000368690 DPH5Q9H2P9 285 aa18.89■□□□□ 0.61
CHTOP-203ENST00000368690 GOLPH3Q9H4A6 298 aa18.89■□□□□ 0.61
CHTOP-203ENST00000368690 INTS9Q9NV88 658 aaKnown RBP18.89■□□□□ 0.61
CHTOP-203ENST00000368690 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.89■□□□□ 0.61
CHTOP-203ENST00000368690 PPP1R1BQ9UD71 204 aaPredicted RBP18.89■□□□□ 0.61
CHTOP-203ENST00000368690 AMFRQ9UKV5 643 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms