RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 ZNF286BP0CG31 522 aa13.63□□□□□ -0.23
TUBE1-202ENST00000368662 STK4Q13043 487 aa13.63□□□□□ -0.23
TUBE1-202ENST00000368662 ZNF484Q5JVG2 852 aa13.63□□□□□ -0.23
TUBE1-202ENST00000368662 MYCT1Q8N699 235 aa13.63□□□□□ -0.23
TUBE1-202ENST00000368662 SLC17A8Q8NDX2 589 aa13.63□□□□□ -0.23
TUBE1-202ENST00000368662 LENG1Q96BZ8 264 aaPredicted RBP13.63□□□□□ -0.23
TUBE1-202ENST00000368662 SH2D3AQ9BRG2 576 aa13.63□□□□□ -0.23
TUBE1-202ENST00000368662 KATNAL1Q9BW62 490 aa13.63□□□□□ -0.23
TUBE1-202ENST00000368662 DHX33Q9H6R0 707 aaKnown RBP13.63□□□□□ -0.23
TUBE1-202ENST00000368662 PDLIM7Q9NR12 457 aa13.63□□□□□ -0.23
TUBE1-202ENST00000368662 GDAQ9Y2T3 454 aa13.63□□□□□ -0.23
TUBE1-202ENST00000368662 COL1A2P08123 1366 aa13.63□□□□□ -0.23
TUBE1-202ENST00000368662 SMTNL1A8MU46 457 aa13.63□□□□□ -0.23
TUBE1-202ENST00000368662 PSMA7O14818 248 aa13.63□□□□□ -0.23
TUBE1-202ENST00000368662 MAFO75444 373 aaPredicted RBP13.63□□□□□ -0.23
TUBE1-202ENST00000368662 F2P00734 622 aa13.63□□□□□ -0.23
TUBE1-202ENST00000368662 INHAP05111 366 aa13.63□□□□□ -0.23
TUBE1-202ENST00000368662 C6orf222P0C671 652 aaPredicted RBP13.63□□□□□ -0.23
TUBE1-202ENST00000368662 CCND3P30281 292 aaPredicted RBP13.63□□□□□ -0.23
TUBE1-202ENST00000368662 RTP1P59025 263 aa13.63□□□□□ -0.23
TUBE1-202ENST00000368662 TBC1D8BQ0IIM8 1120 aa13.63□□□□□ -0.23
TUBE1-202ENST00000368662 FAM102BQ5T8I3 360 aa13.63□□□□□ -0.23
TUBE1-202ENST00000368662 ADSSL1Q8N142 457 aa13.63□□□□□ -0.23
TUBE1-202ENST00000368662 RBSNQ9H1K0 784 aa13.63□□□□□ -0.23
TUBE1-202ENST00000368662 CBX8Q9HC52 389 aa13.63□□□□□ -0.23
TUBE1-202ENST00000368662 SLC39A2Q9NP94 309 aa13.63□□□□□ -0.23
TUBE1-202ENST00000368662 PTPN22Q9Y2R2 807 aa13.63□□□□□ -0.23
TUBE1-202ENST00000368662 PTCH2Q9Y6C5 1203 aa13.63□□□□□ -0.23
TUBE1-202ENST00000368662 SYNRGQ9UMZ2 1314 aa13.63□□□□□ -0.23
TUBE1-202ENST00000368662 RSPH10B2B2RC85 870 aa13.62□□□□□ -0.23
TUBE1-202ENST00000368662 PPP1R3GB7ZBB8 358 aa13.62□□□□□ -0.23
TUBE1-202ENST00000368662 IKBKBO14920 756 aa13.62□□□□□ -0.23
TUBE1-202ENST00000368662 RSPH10BP0C881 870 aa13.62□□□□□ -0.23
TUBE1-202ENST00000368662 MAPTP10636 758 aaKnown RBP13.62□□□□□ -0.23
TUBE1-202ENST00000368662 PLS3P13797 630 aa13.62□□□□□ -0.23
TUBE1-202ENST00000368662 PRCPP42785 496 aa13.62□□□□□ -0.23
TUBE1-202ENST00000368662 EMC2Q15006 297 aa13.62□□□□□ -0.23
TUBE1-202ENST00000368662 ODR4Q5SWX8 454 aa13.62□□□□□ -0.23
TUBE1-202ENST00000368662 STXBP4Q6ZWJ1 553 aa13.62□□□□□ -0.23
TUBE1-202ENST00000368662 SFR1Q86XK3 245 aa13.62□□□□□ -0.23
TUBE1-202ENST00000368662 SMYD4Q8IYR2 804 aaPredicted RBP13.62□□□□□ -0.23
TUBE1-202ENST00000368662 DAW1Q8N136 415 aa13.62□□□□□ -0.23
TUBE1-202ENST00000368662 GUF1Q8N442 669 aaKnown RBP13.62□□□□□ -0.23
TUBE1-202ENST00000368662 KIAA0895Q8NCT3 520 aa13.62□□□□□ -0.23
TUBE1-202ENST00000368662 RNF214Q8ND24 703 aa13.62□□□□□ -0.23
TUBE1-202ENST00000368662 DHTKD1Q96HY7 919 aaPredicted RBP13.62□□□□□ -0.23
TUBE1-202ENST00000368662 CEP89Q96ST8 783 aa13.62□□□□□ -0.23
TUBE1-202ENST00000368662 RNPEPQ9H4A4 650 aa13.62□□□□□ -0.23
TUBE1-202ENST00000368662 MRPL44Q9H9J2 332 aaKnown RBP13.62□□□□□ -0.23
TUBE1-202ENST00000368662 HMX1Q9NP08 348 aaPredicted RBP13.62□□□□□ -0.23
TUBE1-202ENST00000368662 XPNPEP3Q9NQH7 507 aa13.62□□□□□ -0.23
TUBE1-202ENST00000368662 DDX20Q9UHI6 824 aaKnown RBP13.62□□□□□ -0.23
TUBE1-202ENST00000368662 PCDHA2Q9Y5H9 948 aa13.62□□□□□ -0.23
TUBE1-202ENST00000368662 HTTP42858 3142 aa13.62□□□□□ -0.23
TUBE1-202ENST00000368662 ARID2Q68CP9 1835 aa13.61□□□□□ -0.23
TUBE1-202ENST00000368662 GOLGA6L19H0YKK7 550 aa13.61□□□□□ -0.23
TUBE1-202ENST00000368662 MRE11P49959 708 aa13.61□□□□□ -0.23
TUBE1-202ENST00000368662 TPM4P67936 248 aa13.61□□□□□ -0.23
TUBE1-202ENST00000368662 MYL5Q02045 173 aa13.61□□□□□ -0.23
TUBE1-202ENST00000368662 PAK1Q13153 545 aa13.61□□□□□ -0.23
TUBE1-202ENST00000368662 MAPK7Q13164 816 aa13.61□□□□□ -0.23
TUBE1-202ENST00000368662 UVSSAQ2YD98 709 aa13.61□□□□□ -0.23
TUBE1-202ENST00000368662 FAM178BQ8IXR5 827 aa13.61□□□□□ -0.23
TUBE1-202ENST00000368662 RWDD2AQ9UIY3 292 aa13.61□□□□□ -0.23
TUBE1-202ENST00000368662 CENPFP49454 3210 aa13.61□□□□□ -0.23
TUBE1-202ENST00000368662 MAGEB2O15479 319 aa13.61□□□□□ -0.23
TUBE1-202ENST00000368662 CD44P16070 742 aaKnown RBP13.61□□□□□ -0.23
TUBE1-202ENST00000368662 SCP2P22307 547 aa13.61□□□□□ -0.23
TUBE1-202ENST00000368662 CST5P28325 142 aaPredicted RBP13.61□□□□□ -0.23
TUBE1-202ENST00000368662 ABCD1P33897 745 aa13.61□□□□□ -0.23
TUBE1-202ENST00000368662 SMTNP53814 917 aa13.61□□□□□ -0.23
TUBE1-202ENST00000368662 DMP1Q13316 513 aaPredicted RBP13.61□□□□□ -0.23
TUBE1-202ENST00000368662 ALCAMQ13740 583 aa13.61□□□□□ -0.23
TUBE1-202ENST00000368662 IQCB1Q15051 598 aa13.61□□□□□ -0.23
TUBE1-202ENST00000368662 GNASQ5JWF2 1037 aa13.61□□□□□ -0.23
TUBE1-202ENST00000368662 MAEAQ7L5Y9 396 aa13.61□□□□□ -0.23
TUBE1-202ENST00000368662 MYOCDQ8IZQ8 938 aa13.61□□□□□ -0.23
TUBE1-202ENST00000368662 RETREG2Q8NC44 543 aa13.61□□□□□ -0.23
TUBE1-202ENST00000368662 ENOX1Q8TC92 643 aaKnown RBP13.61□□□□□ -0.23
TUBE1-202ENST00000368662 TCP11Q8WWU5 503 aa13.61□□□□□ -0.23
TUBE1-202ENST00000368662 IFT74Q96LB3 600 aa13.61□□□□□ -0.23
TUBE1-202ENST00000368662 GRPEL1Q9HAV7 217 aa13.61□□□□□ -0.23
TUBE1-202ENST00000368662 XPNPEP1Q9NQW7 623 aa13.61□□□□□ -0.23
TUBE1-202ENST00000368662 BICDL2A1A5D9 508 aa13.6□□□□□ -0.23
TUBE1-202ENST00000368662 RRN3P2A6NIE6 340 aa13.6□□□□□ -0.23
TUBE1-202ENST00000368662 SFI1A8K8P3 1242 aa13.6□□□□□ -0.23
TUBE1-202ENST00000368662 ZBTB42B2RXF5 422 aa13.6□□□□□ -0.23
TUBE1-202ENST00000368662 EIF3DO15371 548 aaKnown RBP eCLIP13.6□□□□□ -0.23
TUBE1-202ENST00000368662 ADAMTS4O75173 837 aa13.6□□□□□ -0.23
TUBE1-202ENST00000368662 MYL3P08590 195 aa13.6□□□□□ -0.23
TUBE1-202ENST00000368662 INSRRP14616 1297 aa13.6□□□□□ -0.23
TUBE1-202ENST00000368662 PURAQ00577 322 aaKnown RBP13.6□□□□□ -0.23
TUBE1-202ENST00000368662 BEX3Q00994 111 aa13.6□□□□□ -0.23
TUBE1-202ENST00000368662 KLHL10Q6JEL2 608 aa13.6□□□□□ -0.23
TUBE1-202ENST00000368662 LUZP1Q86V48 1076 aa13.6□□□□□ -0.23
TUBE1-202ENST00000368662 PCSK9Q8NBP7 692 aaKnown RBP13.6□□□□□ -0.23
TUBE1-202ENST00000368662 HPS3Q969F9 1004 aa13.6□□□□□ -0.23
TUBE1-202ENST00000368662 PCDHB13Q9Y5F0 798 aa13.6□□□□□ -0.23
TUBE1-202ENST00000368662 UBE4BO95155 1302 aa13.6□□□□□ -0.23
TUBE1-202ENST00000368662 NRCAMQ92823 1304 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms