RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 AFG1LQ8WV93 481 aa13.87□□□□□ -0.19
PTPRK-207ENST00000368226 THOC1Q96FV9 657 aaKnown RBP13.87□□□□□ -0.19
PTPRK-207ENST00000368226 ANAPC7Q9UJX3 599 aa13.87□□□□□ -0.19
PTPRK-207ENST00000368226 KIF28PB7ZC32 967 aa13.86□□□□□ -0.19
PTPRK-207ENST00000368226 CLTAP09496 248 aa13.86□□□□□ -0.19
PTPRK-207ENST00000368226 LRRC63Q05C16 580 aa13.86□□□□□ -0.19
PTPRK-207ENST00000368226 MAP7Q14244 749 aa13.86□□□□□ -0.19
PTPRK-207ENST00000368226 TTLL4Q14679 1199 aa13.86□□□□□ -0.19
PTPRK-207ENST00000368226 ALKBH5Q6P6C2 394 aaKnown RBP13.86□□□□□ -0.19
PTPRK-207ENST00000368226 HEY1Q9Y5J3 304 aa13.86□□□□□ -0.19
PTPRK-207ENST00000368226 GOLGA8CPA6NN73 597 aa13.86□□□□□ -0.19
PTPRK-207ENST00000368226 FOXN1O15353 648 aa13.86□□□□□ -0.19
PTPRK-207ENST00000368226 MYL1P05976 194 aa13.86□□□□□ -0.19
PTPRK-207ENST00000368226 FCER1AP12319 257 aa13.86□□□□□ -0.19
PTPRK-207ENST00000368226 PLS3P13797 630 aa13.86□□□□□ -0.19
PTPRK-207ENST00000368226 LIG3P49916 1009 aa13.86□□□□□ -0.19
PTPRK-207ENST00000368226 HABP4Q5JVS0 413 aaKnown RBP13.86□□□□□ -0.19
PTPRK-207ENST00000368226 IFT122Q9HBG6 1241 aa13.86□□□□□ -0.19
PTPRK-207ENST00000368226 ACSL3O95573 720 aa13.86□□□□□ -0.19
PTPRK-207ENST00000368226 PHKA2P46019 1235 aa13.86□□□□□ -0.19
PTPRK-207ENST00000368226 SLMAPQ14BN4 828 aa13.86□□□□□ -0.19
PTPRK-207ENST00000368226 PCGF5Q86SE9 256 aa13.86□□□□□ -0.19
PTPRK-207ENST00000368226 MIPOL1Q8TD10 442 aa13.86□□□□□ -0.19
PTPRK-207ENST00000368226 A6NNZ2 444 aa13.86□□□□□ -0.19
PTPRK-207ENST00000368226 TUBB8Q3ZCM7 444 aa13.86□□□□□ -0.19
PTPRK-207ENST00000368226 TBC1D16Q8TBP0 767 aa13.86□□□□□ -0.19
PTPRK-207ENST00000368226 CCT5P48643 541 aa13.86□□□□□ -0.19
PTPRK-207ENST00000368226 DR1Q01658 176 aa13.86□□□□□ -0.19
PTPRK-207ENST00000368226 HPS3Q969F9 1004 aa13.86□□□□□ -0.19
PTPRK-207ENST00000368226 C11orf70Q9BRQ4 267 aa13.86□□□□□ -0.19
PTPRK-207ENST00000368226 PCSK1NQ9UHG2 260 aa13.86□□□□□ -0.19
PTPRK-207ENST00000368226 LRRC53A6NM62 1247 aa13.85□□□□□ -0.19
PTPRK-207ENST00000368226 M0QYV0 167 aa13.85□□□□□ -0.19
PTPRK-207ENST00000368226 PPP1R12AO14974 1030 aaPredicted RBP13.85□□□□□ -0.19
PTPRK-207ENST00000368226 PALMO75781 387 aa13.85□□□□□ -0.19
PTPRK-207ENST00000368226 FGGP02679 453 aa13.85□□□□□ -0.19
PTPRK-207ENST00000368226 RASSF2P50749 326 aa13.85□□□□□ -0.19
PTPRK-207ENST00000368226 HP1BP3Q5SSJ5 553 aaPredicted RBP13.85□□□□□ -0.19
PTPRK-207ENST00000368226 SP8Q8IXZ3 490 aa13.85□□□□□ -0.19
PTPRK-207ENST00000368226 THEM5Q8N1Q8 247 aa13.85□□□□□ -0.19
PTPRK-207ENST00000368226 IPO5O00410 1097 aaKnown RBP13.85□□□□□ -0.19
PTPRK-207ENST00000368226 MOCS2O96007 188 aaPredicted RBP13.85□□□□□ -0.19
PTPRK-207ENST00000368226 NSUN2Q08J23 767 aaKnown RBP eCLIP13.85□□□□□ -0.19
PTPRK-207ENST00000368226 NME3Q13232 169 aa13.85□□□□□ -0.19
PTPRK-207ENST00000368226 FAF2Q96CS3 445 aa13.85□□□□□ -0.19
PTPRK-207ENST00000368226 ADAM22Q9P0K1 906 aa13.85□□□□□ -0.19
PTPRK-207ENST00000368226 NVLO15381 856 aaKnown RBP13.85□□□□□ -0.19
PTPRK-207ENST00000368226 PMLP29590 882 aa13.85□□□□□ -0.19
PTPRK-207ENST00000368226 ARL13BQ3SXY8 428 aa13.85□□□□□ -0.19
PTPRK-207ENST00000368226 RNF217Q8TC41 542 aa13.85□□□□□ -0.19
PTPRK-207ENST00000368226 HACD3Q9P035 362 aa13.85□□□□□ -0.19
PTPRK-207ENST00000368226 SURF1Q15526 300 aa13.85□□□□□ -0.19
PTPRK-207ENST00000368226 ACAD9Q9H845 621 aa13.85□□□□□ -0.19
PTPRK-207ENST00000368226 CNOT8Q9UFF9 292 aaKnown RBP13.85□□□□□ -0.19
PTPRK-207ENST00000368226 FBXO40Q9UH90 709 aa13.85□□□□□ -0.19
PTPRK-207ENST00000368226 TLK1Q9UKI8 766 aa13.85□□□□□ -0.19
PTPRK-207ENST00000368226 HUS1O60921 280 aa13.85□□□□□ -0.19
PTPRK-207ENST00000368226 ADRA2BP18089 450 aa13.85□□□□□ -0.19
PTPRK-207ENST00000368226 IL9RQ01113 521 aa13.85□□□□□ -0.19
PTPRK-207ENST00000368226 BARHL2Q9NY43 387 aa13.85□□□□□ -0.19
PTPRK-207ENST00000368226 CNOT7Q9UIV1 285 aaKnown RBP13.85□□□□□ -0.19
PTPRK-207ENST00000368226 SART1O43290 800 aaKnown RBP13.84□□□□□ -0.19
PTPRK-207ENST00000368226 GNAT1P11488 350 aa13.84□□□□□ -0.19
PTPRK-207ENST00000368226 TMEM62Q0P6H9 643 aa13.84□□□□□ -0.19
PTPRK-207ENST00000368226 SPDL1Q96EA4 605 aa13.84□□□□□ -0.19
PTPRK-207ENST00000368226 RUNDC3BQ96NL0 473 aa13.84□□□□□ -0.19
PTPRK-207ENST00000368226 EIF3CLB5ME19 914 aaKnown RBP13.84□□□□□ -0.19
PTPRK-207ENST00000368226 PI4K2BG5E9Z4 385 aa13.84□□□□□ -0.19
PTPRK-207ENST00000368226 ZNF500O60304 480 aaPredicted RBP13.84□□□□□ -0.19
PTPRK-207ENST00000368226 TRIM49P0CI25 452 aa13.84□□□□□ -0.19
PTPRK-207ENST00000368226 TRIM49CP0CI26 452 aa13.84□□□□□ -0.19
PTPRK-207ENST00000368226 KRT33BQ14525 404 aa13.84□□□□□ -0.19
PTPRK-207ENST00000368226 DBN1Q16643 649 aa13.84□□□□□ -0.19
PTPRK-207ENST00000368226 LDHDQ86WU2 507 aa13.84□□□□□ -0.19
PTPRK-207ENST00000368226 XXYLT1Q8NBI6 393 aa13.84□□□□□ -0.19
PTPRK-207ENST00000368226 RAB3IPQ96QF0 476 aaPredicted RBP13.84□□□□□ -0.19
PTPRK-207ENST00000368226 EIF3CQ99613 913 aaKnown RBP13.84□□□□□ -0.19
PTPRK-207ENST00000368226 EIF2AK1Q9BQI3 630 aaKnown RBP13.84□□□□□ -0.19
PTPRK-207ENST00000368226 FAM217BQ9NTX9 383 aaPredicted RBP13.84□□□□□ -0.19
PTPRK-207ENST00000368226 MFAP3LO75121 409 aa13.84□□□□□ -0.19
PTPRK-207ENST00000368226 MT-ND3P03897 115 aa13.84□□□□□ -0.19
PTPRK-207ENST00000368226 ZNF211Q13398 564 aaPredicted RBP13.84□□□□□ -0.19
PTPRK-207ENST00000368226 PSPC1Q8WXF1 523 aaKnown RBP13.84□□□□□ -0.19
PTPRK-207ENST00000368226 LRGUKQ96M69 825 aa13.84□□□□□ -0.19
PTPRK-207ENST00000368226 RGL1Q9NZL6 768 aa13.84□□□□□ -0.19
PTPRK-207ENST00000368226 RPAP1Q9BWH6 1393 aaPredicted RBP13.84□□□□□ -0.19
PTPRK-207ENST00000368226 EXOC1LA0A1B0GW35 172 aa13.84□□□□□ -0.19
PTPRK-207ENST00000368226 LDHAP00338 332 aaKnown RBP13.84□□□□□ -0.19
PTPRK-207ENST00000368226 CTSHP09668 335 aa13.84□□□□□ -0.19
PTPRK-207ENST00000368226 ATG9AQ7Z3C6 839 aa13.84□□□□□ -0.19
PTPRK-207ENST00000368226 PDZD8Q8NEN9 1154 aa13.84□□□□□ -0.19
PTPRK-207ENST00000368226 TBC1D22BQ9NU19 505 aa13.84□□□□□ -0.19
PTPRK-207ENST00000368226 BAG5Q9UL15 447 aa13.84□□□□□ -0.19
PTPRK-207ENST00000368226 TTC7AQ9ULT0 858 aaPredicted RBP13.84□□□□□ -0.19
PTPRK-207ENST00000368226 QARSP47897 775 aaKnown RBP13.84□□□□□ -0.19
PTPRK-207ENST00000368226 KCNH2Q12809 1159 aa13.84□□□□□ -0.19
PTPRK-207ENST00000368226 CCDC38Q502W7 563 aa13.84□□□□□ -0.19
PTPRK-207ENST00000368226 PRR5LQ6MZQ0 368 aa13.83□□□□□ -0.2
PTPRK-207ENST00000368226 RNF25Q96BH1 459 aaPredicted RBP13.83□□□□□ -0.2
PTPRK-207ENST00000368226 NOC2LQ9Y3T9 749 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms