RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 PPP2R5AQ15172 486 aa15.58■□□□□ 0.08
CD48-201ENST00000368045 FAM153CQ494X1 144 aa15.58■□□□□ 0.08
CD48-201ENST00000368045 OTOP1Q7RTM1 612 aa15.58■□□□□ 0.08
CD48-201ENST00000368045 PEX26Q7Z412 305 aa15.58■□□□□ 0.08
CD48-201ENST00000368045 EFCAB13Q8IY85 973 aa15.58■□□□□ 0.08
CD48-201ENST00000368045 SLC30A5Q8TAD4 765 aa15.58■□□□□ 0.08
CD48-201ENST00000368045 PIK3R5Q8WYR1 880 aa15.58■□□□□ 0.08
CD48-201ENST00000368045 STK33Q9BYT3 514 aa15.58■□□□□ 0.08
CD48-201ENST00000368045 TMEM51Q9NW97 253 aa15.58■□□□□ 0.08
CD48-201ENST00000368045 FAM153AQ9UHL3 310 aa15.58■□□□□ 0.08
CD48-201ENST00000368045 ODF2LQ9ULJ1 636 aa15.58■□□□□ 0.08
CD48-201ENST00000368045 TTC7AQ9ULT0 858 aaPredicted RBP15.58■□□□□ 0.08
CD48-201ENST00000368045 NCANO14594 1321 aa15.58■□□□□ 0.08
CD48-201ENST00000368045 FRMPD4Q14CM0 1322 aa15.58■□□□□ 0.08
CD48-201ENST00000368045 ZMYM2Q9UBW7 1377 aa15.58■□□□□ 0.08
CD48-201ENST00000368045 ESYT3A0FGR9 886 aa15.57■□□□□ 0.08
CD48-201ENST00000368045 ZNF233A6NK53 670 aa15.57■□□□□ 0.08
CD48-201ENST00000368045 SRRM3A6NNA2 597 aaPredicted RBP15.57■□□□□ 0.08
CD48-201ENST00000368045 HMGB1P1B2RPK0 211 aaPredicted RBP15.57■□□□□ 0.08
CD48-201ENST00000368045 TRIM66O15016 1216 aa15.57■□□□□ 0.08
CD48-201ENST00000368045 ECE2O60344 883 aa15.57■□□□□ 0.08
CD48-201ENST00000368045 GH2P01242 217 aa15.57■□□□□ 0.08
CD48-201ENST00000368045 RFX1P22670 979 aa15.57■□□□□ 0.08
CD48-201ENST00000368045 HOXA13P31271 388 aaPredicted RBP15.57■□□□□ 0.08
CD48-201ENST00000368045 SOX5P35711 763 aa15.57■□□□□ 0.08
CD48-201ENST00000368045 MYBPC2Q14324 1141 aa15.57■□□□□ 0.08
CD48-201ENST00000368045 LRCH2Q5VUJ6 765 aa15.57■□□□□ 0.08
CD48-201ENST00000368045 HS2ST1Q7LGA3 356 aa15.57■□□□□ 0.08
CD48-201ENST00000368045 MYCT1Q8N699 235 aa15.57■□□□□ 0.08
CD48-201ENST00000368045 PPM1EQ8WY54 764 aa15.57■□□□□ 0.08
CD48-201ENST00000368045 LRRC45Q96CN5 670 aa15.57■□□□□ 0.08
CD48-201ENST00000368045 WDR11Q9BZH6 1224 aa15.57■□□□□ 0.08
CD48-201ENST00000368045 DMAC2Q9NW81 257 aa15.57■□□□□ 0.08
CD48-201ENST00000368045 RGL1Q9NZL6 768 aa15.57■□□□□ 0.08
CD48-201ENST00000368045 HERC5Q9UII4 1024 aaKnown RBP15.57■□□□□ 0.08
CD48-201ENST00000368045 PCDHB13Q9Y5F0 798 aa15.57■□□□□ 0.08
CD48-201ENST00000368045 ZSCAN5CA6NGD5 496 aaPredicted RBP15.57■□□□□ 0.08
CD48-201ENST00000368045 EBAG9O00559 213 aa15.57■□□□□ 0.08
CD48-201ENST00000368045 CLIC2O15247 247 aa15.57■□□□□ 0.08
CD48-201ENST00000368045 SLITRK3O94933 977 aa15.57■□□□□ 0.08
CD48-201ENST00000368045 TMEM253P0C7T8 217 aa15.57■□□□□ 0.08
CD48-201ENST00000368045 FMO5P49326 533 aa15.57■□□□□ 0.08
CD48-201ENST00000368045 PRELPP51888 382 aa15.57■□□□□ 0.08
CD48-201ENST00000368045 STAT2P52630 851 aa15.57■□□□□ 0.08
CD48-201ENST00000368045 CLUL1Q15846 466 aa15.57■□□□□ 0.08
CD48-201ENST00000368045 KLHL7Q8IXQ5 586 aa15.57■□□□□ 0.08
CD48-201ENST00000368045 METTL13Q8N6R0 699 aa15.57■□□□□ 0.08
CD48-201ENST00000368045 FLAD1Q8NFF5 587 aa15.57■□□□□ 0.08
CD48-201ENST00000368045 BCAS4Q8TDM0 211 aa15.57■□□□□ 0.08
CD48-201ENST00000368045 VTI1AQ96AJ9 217 aa15.57■□□□□ 0.08
CD48-201ENST00000368045 NACC1Q96RE7 527 aa15.57■□□□□ 0.08
CD48-201ENST00000368045 ARHGEF10LQ9HCE6 1279 aa15.57■□□□□ 0.08
CD48-201ENST00000368045 AJAP1Q9UKB5 411 aaPredicted RBP15.57■□□□□ 0.08
CD48-201ENST00000368045 FRMD4BQ9Y2L6 1034 aa15.57■□□□□ 0.08
CD48-201ENST00000368045 NOC2LQ9Y3T9 749 aaKnown RBP15.57■□□□□ 0.08
CD48-201ENST00000368045 PCDHAC2Q9Y5I4 1007 aa15.57■□□□□ 0.08
CD48-201ENST00000368045 F8VZ95 297 aa15.56■□□□□ 0.08
CD48-201ENST00000368045 GCOM1H8Y6P7 765 aaPredicted RBP15.56■□□□□ 0.08
CD48-201ENST00000368045 POLR2MP0CAP2 368 aa15.56■□□□□ 0.08
CD48-201ENST00000368045 GUCY2FP51841 1108 aa15.56■□□□□ 0.08
CD48-201ENST00000368045 ERVK-9P63128 1117 aa15.56■□□□□ 0.08
CD48-201ENST00000368045 MTMR3Q13615 1198 aa15.56■□□□□ 0.08
CD48-201ENST00000368045 PPP2R5EQ16537 467 aa15.56■□□□□ 0.08
CD48-201ENST00000368045 CC2D2BQ6DHV5 1058 aa15.56■□□□□ 0.08
CD48-201ENST00000368045 STYK1Q6J9G0 422 aa15.56■□□□□ 0.08
CD48-201ENST00000368045 MAATS1Q7Z4T9 603 aa15.56■□□□□ 0.08
CD48-201ENST00000368045 SPATS2Q86XZ4 545 aaKnown RBP15.56■□□□□ 0.08
CD48-201ENST00000368045 SLC9A9Q8IVB4 645 aa15.56■□□□□ 0.08
CD48-201ENST00000368045 CCDC26Q8TAB7 109 aa15.56■□□□□ 0.08
CD48-201ENST00000368045 CYP2W1Q8TAV3 490 aa15.56■□□□□ 0.08
CD48-201ENST00000368045 U2AF1L4Q8WU68 220 aaKnown RBP15.56■□□□□ 0.08
CD48-201ENST00000368045 RFFLQ8WZ73 363 aa15.56■□□□□ 0.08
CD48-201ENST00000368045 HES6Q96HZ4 224 aa15.56■□□□□ 0.08
CD48-201ENST00000368045 DYDC2Q96IM9 177 aa15.56■□□□□ 0.08
CD48-201ENST00000368045 ATP6V1G3Q96LB4 118 aa15.56■□□□□ 0.08
CD48-201ENST00000368045 WDR18Q9BV38 432 aa15.56■□□□□ 0.08
CD48-201ENST00000368045 ATXN2Q99700 1313 aaKnown RBP15.55■□□□□ 0.08
CD48-201ENST00000368045 KRIT1O00522 736 aa15.55■□□□□ 0.08
CD48-201ENST00000368045 EVI5O60447 810 aa15.55■□□□□ 0.08
CD48-201ENST00000368045 GUCY2CP25092 1073 aa15.55■□□□□ 0.08
CD48-201ENST00000368045 SETQ01105 290 aaPredicted RBP15.55■□□□□ 0.08
CD48-201ENST00000368045 CTTNQ14247 550 aaKnown RBP15.55■□□□□ 0.08
CD48-201ENST00000368045 ZNF720Q7Z2F6 126 aa15.55■□□□□ 0.08
CD48-201ENST00000368045 NT5DC3Q86UY8 548 aa15.55■□□□□ 0.08
CD48-201ENST00000368045 TPH2Q8IWU9 490 aa15.55■□□□□ 0.08
CD48-201ENST00000368045 NEK9Q8TD19 979 aa15.55■□□□□ 0.08
CD48-201ENST00000368045 GOPCQ9HD26 462 aa15.55■□□□□ 0.08
CD48-201ENST00000368045 AMFRQ9UKV5 643 aa15.55■□□□□ 0.08
CD48-201ENST00000368045 COL11A2P13942 1736 aaPredicted RBP15.55■□□□□ 0.08
CD48-201ENST00000368045 A0A087WUV0 522 aaPredicted RBP15.54■□□□□ 0.08
CD48-201ENST00000368045 A0A1W2PRG0 241 aa15.54■□□□□ 0.08
CD48-201ENST00000368045 GOLGA6L10A6NI86 522 aa15.54■□□□□ 0.08
CD48-201ENST00000368045 TMCO5BA8MYB1 307 aa15.54■□□□□ 0.08
CD48-201ENST00000368045 SART1O43290 800 aaKnown RBP15.54■□□□□ 0.08
CD48-201ENST00000368045 PLA2G6O60733 806 aa15.54■□□□□ 0.08
CD48-201ENST00000368045 GAS7O60861 476 aa15.54■□□□□ 0.08
CD48-201ENST00000368045 TRIM37O94972 964 aa15.54■□□□□ 0.08
CD48-201ENST00000368045 KRT14P02533 472 aa15.54■□□□□ 0.08
CD48-201ENST00000368045 NMT1P30419 496 aaKnown RBP15.54■□□□□ 0.08
CD48-201ENST00000368045 CCT5P48643 541 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms