RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 HPSEQ9Y251 543 aa12.34□□□□□ -0.43
RD3-201ENST00000367002 SSU72P8A0A1W2PR75 194 aa12.34□□□□□ -0.43
RD3-201ENST00000367002 MYMKA6NI61 221 aa12.34□□□□□ -0.43
RD3-201ENST00000367002 NPR1P16066 1061 aa12.34□□□□□ -0.43
RD3-201ENST00000367002 OSTNP61366 133 aa12.34□□□□□ -0.43
RD3-201ENST00000367002 SLC18A3Q16572 532 aa12.34□□□□□ -0.43
RD3-201ENST00000367002 SBK1Q52WX2 424 aa12.34□□□□□ -0.43
RD3-201ENST00000367002 SEPT10Q9P0V9 454 aa12.34□□□□□ -0.43
RD3-201ENST00000367002 GRID2IPA4D2P6 1211 aa12.33□□□□□ -0.44
RD3-201ENST00000367002 PPP1R3GB7ZBB8 358 aa12.33□□□□□ -0.44
RD3-201ENST00000367002 ASNSP08243 561 aa12.33□□□□□ -0.44
RD3-201ENST00000367002 USP11P51784 963 aa12.33□□□□□ -0.44
RD3-201ENST00000367002 PPP2R2AP63151 447 aa12.33□□□□□ -0.44
RD3-201ENST00000367002 SF3B3Q15393 1217 aaKnown RBP12.33□□□□□ -0.44
RD3-201ENST00000367002 ZNF394Q53GI3 561 aa12.33□□□□□ -0.44
RD3-201ENST00000367002 ICE2Q659A1 982 aa12.33□□□□□ -0.44
RD3-201ENST00000367002 NXNQ6DKJ4 435 aa12.33□□□□□ -0.44
RD3-201ENST00000367002 ZNF449Q6P9G9 518 aa12.33□□□□□ -0.44
RD3-201ENST00000367002 FAM47EQ6ZV65 393 aa12.33□□□□□ -0.44
RD3-201ENST00000367002 PDCD7Q8N8D1 485 aaKnown RBP12.33□□□□□ -0.44
RD3-201ENST00000367002 THOC1Q96FV9 657 aaKnown RBP12.33□□□□□ -0.44
RD3-201ENST00000367002 C7orf25Q9BPX7 421 aa12.33□□□□□ -0.44
RD3-201ENST00000367002 PITPNM3Q9BZ71 974 aa12.33□□□□□ -0.44
RD3-201ENST00000367002 MLXIPLQ9NP71 852 aa12.33□□□□□ -0.44
RD3-201ENST00000367002 FBXL5Q9UKA1 691 aa12.33□□□□□ -0.44
RD3-201ENST00000367002 NOC2LQ9Y3T9 749 aaKnown RBP12.33□□□□□ -0.44
RD3-201ENST00000367002 A6NJR5 290 aa12.33□□□□□ -0.44
RD3-201ENST00000367002 PRELPP51888 382 aa12.33□□□□□ -0.44
RD3-201ENST00000367002 GUCY1A3Q02108 690 aa12.33□□□□□ -0.44
RD3-201ENST00000367002 RNASELQ05823 741 aaKnown RBP12.33□□□□□ -0.44
RD3-201ENST00000367002 PYROXD1Q8WU10 500 aa12.33□□□□□ -0.44
RD3-201ENST00000367002 QTRT2Q9H974 415 aaKnown RBP12.33□□□□□ -0.44
RD3-201ENST00000367002 BCAP29Q9UHQ4 241 aa12.33□□□□□ -0.44
RD3-201ENST00000367002 TRPC5Q9UL62 973 aaPredicted RBP12.33□□□□□ -0.44
RD3-201ENST00000367002 TFR2Q9UP52 801 aa12.33□□□□□ -0.44
RD3-201ENST00000367002 TNS3Q68CZ2 1445 aa12.33□□□□□ -0.44
RD3-201ENST00000367002 CHUKO15111 745 aa12.33□□□□□ -0.44
RD3-201ENST00000367002 BEND6Q5SZJ8 279 aaPredicted RBP12.33□□□□□ -0.44
RD3-201ENST00000367002 PPP1R2P3Q6NXS1 205 aa12.33□□□□□ -0.44
RD3-201ENST00000367002 EEPD1Q7L9B9 569 aa12.33□□□□□ -0.44
RD3-201ENST00000367002 PODNQ7Z5L7 613 aa12.33□□□□□ -0.44
RD3-201ENST00000367002 CLEC10AQ8IUN9 316 aa12.33□□□□□ -0.44
RD3-201ENST00000367002 SRRM1Q8IYB3 904 aaKnown RBP12.33□□□□□ -0.44
RD3-201ENST00000367002 CCHCR1Q8TD31 782 aa12.33□□□□□ -0.44
RD3-201ENST00000367002 VIPAS39Q9H9C1 493 aa12.33□□□□□ -0.44
RD3-201ENST00000367002 RGL1Q9NZL6 768 aa12.33□□□□□ -0.44
RD3-201ENST00000367002 MAP3K21Q5TCX8 1036 aa12.32□□□□□ -0.44
RD3-201ENST00000367002 RASIP1Q5U651 963 aa12.32□□□□□ -0.44
RD3-201ENST00000367002 RPUSD2Q8IZ73 545 aaKnown RBP12.32□□□□□ -0.44
RD3-201ENST00000367002 MIPOL1Q8TD10 442 aa12.32□□□□□ -0.44
RD3-201ENST00000367002 RFFLQ8WZ73 363 aa12.32□□□□□ -0.44
RD3-201ENST00000367002 ANKRD36BP1Q96IX9 119 aa12.32□□□□□ -0.44
RD3-201ENST00000367002 ZNF341Q9BYN7 854 aa12.32□□□□□ -0.44
RD3-201ENST00000367002 PFDN4Q9NQP4 134 aa12.32□□□□□ -0.44
RD3-201ENST00000367002 MTMR4Q9NYA4 1195 aa12.32□□□□□ -0.44
RD3-201ENST00000367002 SMARCAL1Q9NZC9 954 aa12.32□□□□□ -0.44
RD3-201ENST00000367002 SEL1LQ9UBV2 794 aa12.32□□□□□ -0.44
RD3-201ENST00000367002 TACC3Q9Y6A5 838 aa12.32□□□□□ -0.44
RD3-201ENST00000367002 ADGRB1O14514 1584 aa12.32□□□□□ -0.44
RD3-201ENST00000367002 SLC16A4O15374 487 aa12.32□□□□□ -0.44
RD3-201ENST00000367002 PPP1R37O75864 691 aa12.32□□□□□ -0.44
RD3-201ENST00000367002 ZBTB33Q86T24 672 aa12.32□□□□□ -0.44
RD3-201ENST00000367002 C7orf31Q8N865 590 aa12.32□□□□□ -0.44
RD3-201ENST00000367002 GBP7Q8N8V2 638 aaPredicted RBP12.32□□□□□ -0.44
RD3-201ENST00000367002 SLITRK6Q9H5Y7 841 aa12.32□□□□□ -0.44
RD3-201ENST00000367002 CNTNAP5Q8WYK1 1306 aa12.32□□□□□ -0.44
RD3-201ENST00000367002 PMS2P54278 862 aa12.32□□□□□ -0.44
RD3-201ENST00000367002 HDLBPQ00341 1268 aaKnown RBP12.32□□□□□ -0.44
RD3-201ENST00000367002 MIS18BP1Q6P0N0 1132 aa12.32□□□□□ -0.44
RD3-201ENST00000367002 GADL1Q6ZQY3 521 aa12.32□□□□□ -0.44
RD3-201ENST00000367002 CENPUQ71F23 418 aa12.32□□□□□ -0.44
RD3-201ENST00000367002 PDZD4Q76G19 769 aaPredicted RBP12.32□□□□□ -0.44
RD3-201ENST00000367002 SRLQ86TD4 932 aa12.32□□□□□ -0.44
RD3-201ENST00000367002 SESTD1Q86VW0 696 aa12.32□□□□□ -0.44
RD3-201ENST00000367002 NLRP14Q86W24 1093 aa12.32□□□□□ -0.44
RD3-201ENST00000367002 NSMCE1Q8WV22 266 aa12.32□□□□□ -0.44
RD3-201ENST00000367002 RMDN3Q96TC7 470 aa12.32□□□□□ -0.44
RD3-201ENST00000367002 RASA4BC9J798 803 aa12.31□□□□□ -0.44
RD3-201ENST00000367002 IPO5O00410 1097 aaKnown RBP12.31□□□□□ -0.44
RD3-201ENST00000367002 RASA4O43374 803 aa12.31□□□□□ -0.44
RD3-201ENST00000367002 OPHN1O60890 802 aa12.31□□□□□ -0.44
RD3-201ENST00000367002 VAMP7P51809 220 aa12.31□□□□□ -0.44
RD3-201ENST00000367002 MTMR1Q13613 665 aa12.31□□□□□ -0.44
RD3-201ENST00000367002 NCAPHQ15003 741 aa12.31□□□□□ -0.44
RD3-201ENST00000367002 RPS6KA2Q15349 733 aa12.31□□□□□ -0.44
RD3-201ENST00000367002 DARS2Q6PI48 645 aaKnown RBP12.31□□□□□ -0.44
RD3-201ENST00000367002 ELOA2Q8IYF1 753 aaPredicted RBP12.31□□□□□ -0.44
RD3-201ENST00000367002 C11orf70Q9BRQ4 267 aa12.31□□□□□ -0.44
RD3-201ENST00000367002 AGXT2Q9BYV1 514 aa12.31□□□□□ -0.44
RD3-201ENST00000367002 SAYSD1Q9NPB0 183 aa12.31□□□□□ -0.44
RD3-201ENST00000367002 TXLNGQ9NUQ3 528 aa12.31□□□□□ -0.44
RD3-201ENST00000367002 NRXN1Q9ULB1 1477 aa12.31□□□□□ -0.44
RD3-201ENST00000367002 PSMD14O00487 310 aa12.31□□□□□ -0.44
RD3-201ENST00000367002 PDXKO00764 312 aa12.31□□□□□ -0.44
RD3-201ENST00000367002 TRIM66O15016 1216 aa12.31□□□□□ -0.44
RD3-201ENST00000367002 LUC7L3O95232 432 aaKnown RBP12.31□□□□□ -0.44
RD3-201ENST00000367002 TOB1P50616 345 aaPredicted RBP12.31□□□□□ -0.44
RD3-201ENST00000367002 IRX4P78413 519 aa12.31□□□□□ -0.44
RD3-201ENST00000367002 TFDP1Q14186 410 aa12.31□□□□□ -0.44
RD3-201ENST00000367002 FRMD5Q7Z6J6 570 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms