RNA–Protein interactions for RNA: ENST00000366497.6

NLRP3-204, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-204ENST00000366497 SPC25Q9HBM1 224 aa9.63□□□□□ -0.87
NLRP3-204ENST00000366497 AKT3Q9Y243 479 aa9.63□□□□□ -0.87
NLRP3-204ENST00000366497 FGRP09769 529 aa9.62□□□□□ -0.87
NLRP3-204ENST00000366497 TAL1P17542 331 aaPredicted RBP9.62□□□□□ -0.87
NLRP3-204ENST00000366497 MAPK4P31152 587 aa9.62□□□□□ -0.87
NLRP3-204ENST00000366497 ATP1A2P50993 1020 aa9.62□□□□□ -0.87
NLRP3-204ENST00000366497 EPHB4P54760 987 aa9.62□□□□□ -0.87
NLRP3-204ENST00000366497 MDM2Q00987 491 aaPredicted RBP9.62□□□□□ -0.87
NLRP3-204ENST00000366497 CXCL9Q07325 125 aa9.62□□□□□ -0.87
NLRP3-204ENST00000366497 ARHGEF6Q15052 776 aa9.62□□□□□ -0.87
NLRP3-204ENST00000366497 DENND2CQ68D51 928 aa9.62□□□□□ -0.87
NLRP3-204ENST00000366497 CC2D1AQ6P1N0 951 aaPredicted RBP9.62□□□□□ -0.87
NLRP3-204ENST00000366497 KCPQ6ZWJ8 1503 aa9.62□□□□□ -0.87
NLRP3-204ENST00000366497 ZNF280CQ8ND82 737 aa9.62□□□□□ -0.87
NLRP3-204ENST00000366497 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.62□□□□□ -0.87
NLRP3-204ENST00000366497 UHMK1Q8TAS1 419 aaKnown RBP9.62□□□□□ -0.87
NLRP3-204ENST00000366497 PBKQ96KB5 322 aa9.62□□□□□ -0.87
NLRP3-204ENST00000366497 PITPNM2Q9BZ72 1349 aa9.62□□□□□ -0.87
NLRP3-204ENST00000366497 PRDM4Q9UKN5 801 aa9.62□□□□□ -0.87
NLRP3-204ENST00000366497 RGPD2P0DJD1 1756 aa9.62□□□□□ -0.87
NLRP3-204ENST00000366497 PMS1P54277 932 aaKnown RBP9.62□□□□□ -0.87
NLRP3-204ENST00000366497 YARSP54577 528 aaKnown RBP9.62□□□□□ -0.87
NLRP3-204ENST00000366497 MAP3K9P80192 1104 aa9.62□□□□□ -0.87
NLRP3-204ENST00000366497 KIF22Q14807 665 aa9.62□□□□□ -0.87
NLRP3-204ENST00000366497 NBPF9Q3BBW0 867 aa9.62□□□□□ -0.87
NLRP3-204ENST00000366497 KCTD16Q68DU8 428 aa9.62□□□□□ -0.87
NLRP3-204ENST00000366497 NKX2-3Q8TAU0 364 aa9.62□□□□□ -0.87
NLRP3-204ENST00000366497 FAM213AQ9BRX8 229 aa9.62□□□□□ -0.87
NLRP3-204ENST00000366497 TEX13BQ9BXU2 312 aa9.62□□□□□ -0.87
NLRP3-204ENST00000366497 NXF1Q9UBU9 619 aaKnown RBP9.62□□□□□ -0.87
NLRP3-204ENST00000366497 TMX2Q9Y320 296 aa9.62□□□□□ -0.87
NLRP3-204ENST00000366497 TACC3Q9Y6A5 838 aa9.62□□□□□ -0.87
NLRP3-204ENST00000366497 AFDNP55196 1824 aaKnown RBP9.62□□□□□ -0.87
NLRP3-204ENST00000366497 EMSYQ7Z589 1322 aa9.62□□□□□ -0.87
NLRP3-204ENST00000366497 WNT7AO00755 349 aa9.62□□□□□ -0.87
NLRP3-204ENST00000366497 THAP12O43422 761 aa9.62□□□□□ -0.87
NLRP3-204ENST00000366497 NR3C2P08235 984 aa9.62□□□□□ -0.87
NLRP3-204ENST00000366497 GLYCTKQ8IVS8 523 aa9.62□□□□□ -0.87
NLRP3-204ENST00000366497 SLC10A4Q96EP9 437 aa9.62□□□□□ -0.87
NLRP3-204ENST00000366497 ERGIC2Q96RQ1 377 aa9.62□□□□□ -0.87
NLRP3-204ENST00000366497 OSBPL9Q96SU4 736 aa9.62□□□□□ -0.87
NLRP3-204ENST00000366497 PPP1R16BQ96T49 567 aa9.62□□□□□ -0.87
NLRP3-204ENST00000366497 MXRA8Q9BRK3 442 aa9.62□□□□□ -0.87
NLRP3-204ENST00000366497 IDI2Q9BXS1 227 aa9.62□□□□□ -0.87
NLRP3-204ENST00000366497 KCNH7Q9NS40 1196 aa9.62□□□□□ -0.87
NLRP3-204ENST00000366497 PACSIN2Q9UNF0 486 aaPredicted RBP9.62□□□□□ -0.87
NLRP3-204ENST00000366497 TFR2Q9UP52 801 aa9.62□□□□□ -0.87
NLRP3-204ENST00000366497 FAN1Q9Y2M0 1017 aa9.62□□□□□ -0.87
NLRP3-204ENST00000366497 ABCC6O95255 1503 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 VIMP08670 466 aaKnown RBP9.61□□□□□ -0.87
NLRP3-204ENST00000366497 ATP2A2P16615 1042 aaKnown RBP9.61□□□□□ -0.87
NLRP3-204ENST00000366497 CD58P19256 250 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 SLC9A1P19634 815 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 ABCD1P33897 745 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 SREBF1P36956 1147 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 RPS6P62753 249 aaKnown RBP9.61□□□□□ -0.87
NLRP3-204ENST00000366497 MAPK8IP2Q13387 824 aaPredicted RBP9.61□□□□□ -0.87
NLRP3-204ENST00000366497 CYFIP1Q7L576 1253 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 KSR1Q8IVT5 923 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 ANKS4BQ8N8V4 417 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 SYT2Q8N9I0 419 aaPredicted RBP9.61□□□□□ -0.87
NLRP3-204ENST00000366497 ATG4CQ96DT6 458 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 NUDT12Q9BQG2 462 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 RNF181Q9P0P0 153 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 PARP2Q9UGN5 583 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 ODF2LQ9ULJ1 636 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 PTPN22Q9Y2R2 807 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 DAAM1Q9Y4D1 1078 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 PCDHAC2Q9Y5I4 1007 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 UCHL3P15374 230 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 POLR2BP30876 1174 aaKnown RBP9.61□□□□□ -0.87
NLRP3-204ENST00000366497 ADCY8P40145 1251 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 E2F4Q16254 413 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 CENPPQ6IPU0 288 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 SH3RF1Q7Z6J0 888 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 RIT2Q99578 217 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 INTS2Q9H0H0 1204 aaKnown RBP9.61□□□□□ -0.87
NLRP3-204ENST00000366497 SEMA6BQ9H3T3 888 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 FAM204AQ9H8W3 233 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 RAB20Q9NX57 234 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 NKIRAS1Q9NYS0 192 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 GGA3Q9NZ52 723 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 A6NNZ2 444 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 RSPH10B2B2RC85 870 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 RSPH10BP0C881 870 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 ERVK-24P63145 666 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 UAP1Q16222 522 aaPredicted RBP9.61□□□□□ -0.87
NLRP3-204ENST00000366497 ZSCAN26Q16670 478 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 TUBB8Q3ZCM7 444 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 KAZNQ674X7 775 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 ZNF746Q6NUN9 644 aaPredicted RBP9.61□□□□□ -0.87
NLRP3-204ENST00000366497 THNSL1Q8IYQ7 743 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 GMCL1P1Q8NEA9 526 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 PPP1R14CQ8TAE6 165 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 CYP2W1Q8TAV3 490 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 FAM81BQ96LP2 452 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 SPON1Q9HCB6 807 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 STIM2Q9P246 746 aa9.61□□□□□ -0.87
NLRP3-204ENST00000366497 CTNND1O60716 968 aaKnown RBP9.6□□□□□ -0.87
NLRP3-204ENST00000366497 SLFN12LQ6IEE8 588 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms