RNA–Protein interactions for RNA: ENST00000365287.1

RNU4-11P-201, Transcript of RNA, U4 small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU4-11P, Length 132 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-11P-201ENST00000365287 ZNF326Q5BKZ1 582 aaKnown RBP2.59□□□□□ -1.99
RNU4-11P-201ENST00000365287 LDLRAD1Q5T700 205 aa2.59□□□□□ -1.99
RNU4-11P-201ENST00000365287 GRAMD4Q6IC98 578 aa2.59□□□□□ -1.99
RNU4-11P-201ENST00000365287 MFSD5Q6N075 450 aa2.59□□□□□ -1.99
RNU4-11P-201ENST00000365287 FAM111BQ6SJ93 734 aa2.59□□□□□ -1.99
RNU4-11P-201ENST00000365287 GRASPQ7Z6J2 395 aaPredicted RBP2.59□□□□□ -1.99
RNU4-11P-201ENST00000365287 FAM169BQ8N8A8 192 aa2.59□□□□□ -1.99
RNU4-11P-201ENST00000365287 Q8N9P0 234 aaPredicted RBP2.59□□□□□ -1.99
RNU4-11P-201ENST00000365287 SH3RF2Q8TEC5 729 aa2.59□□□□□ -1.99
RNU4-11P-201ENST00000365287 SLC7A6OSQ96CW6 309 aaPredicted RBP2.59□□□□□ -1.99
RNU4-11P-201ENST00000365287 KCNJ15Q99712 375 aa2.59□□□□□ -1.99
RNU4-11P-201ENST00000365287 SPATA5L1Q9BVQ7 753 aa2.59□□□□□ -1.99
RNU4-11P-201ENST00000365287 RSAD1Q9HA92 442 aa2.59□□□□□ -1.99
RNU4-11P-201ENST00000365287 RIC8BQ9NVN3 520 aa2.59□□□□□ -1.99
RNU4-11P-201ENST00000365287 BTBD7Q9P203 1132 aa2.59□□□□□ -1.99
RNU4-11P-201ENST00000365287 SRPK3Q9UPE1 567 aa2.59□□□□□ -1.99
RNU4-11P-201ENST00000365287 FAM90A27PA6NNH2 459 aa2.58□□□□□ -2
RNU4-11P-201ENST00000365287 TRIM24O15164 1050 aa2.58□□□□□ -2
RNU4-11P-201ENST00000365287 ZFPL1O95159 310 aa2.58□□□□□ -2
RNU4-11P-201ENST00000365287 MPIG6BO95866 241 aa2.58□□□□□ -2
RNU4-11P-201ENST00000365287 GYPEP15421 78 aa2.58□□□□□ -2
RNU4-11P-201ENST00000365287 LAG3P18627 525 aa2.58□□□□□ -2
RNU4-11P-201ENST00000365287 ZEB1P37275 1124 aaPredicted RBP2.58□□□□□ -2
RNU4-11P-201ENST00000365287 STAT5BP51692 787 aa2.58□□□□□ -2
RNU4-11P-201ENST00000365287 RACK1P63244 317 aaKnown RBP2.58□□□□□ -2
RNU4-11P-201ENST00000365287 ATP2C1P98194 919 aaPredicted RBP2.58□□□□□ -2
RNU4-11P-201ENST00000365287 DCAF17Q5H9S7 520 aaPredicted RBP2.58□□□□□ -2
RNU4-11P-201ENST00000365287 FIGNQ5HY92 759 aa2.58□□□□□ -2
RNU4-11P-201ENST00000365287 FKBP15Q5T1M5 1219 aa2.58□□□□□ -2
RNU4-11P-201ENST00000365287 C1QL3Q5VWW1 255 aa2.58□□□□□ -2
RNU4-11P-201ENST00000365287 LRP10Q7Z4F1 713 aa2.58□□□□□ -2
RNU4-11P-201ENST00000365287 C1QL2Q7Z5L3 287 aa2.58□□□□□ -2
RNU4-11P-201ENST00000365287 SRRM1Q8IYB3 904 aaKnown RBP2.58□□□□□ -2
RNU4-11P-201ENST00000365287 BOLLQ8N9W6 283 aaKnown RBP2.58□□□□□ -2
RNU4-11P-201ENST00000365287 FAM98AQ8NCA5 519 aaKnown RBP2.58□□□□□ -2
RNU4-11P-201ENST00000365287 PUM2Q8TB72 1066 aaKnown RBP eCLIP2.58□□□□□ -2
RNU4-11P-201ENST00000365287 DCAF4Q8WV16 495 aa2.58□□□□□ -2
RNU4-11P-201ENST00000365287 ATXN2LQ8WWM7 1075 aaKnown RBP2.58□□□□□ -2
RNU4-11P-201ENST00000365287 GPRASP2Q96D09 838 aa2.58□□□□□ -2
RNU4-11P-201ENST00000365287 TRAIPQ9BWF2 469 aa2.58□□□□□ -2
RNU4-11P-201ENST00000365287 C1QTNF7Q9BXJ2 289 aa2.58□□□□□ -2
RNU4-11P-201ENST00000365287 KRTAP2-2Q9BYT5 123 aa2.58□□□□□ -2
RNU4-11P-201ENST00000365287 TESQ9UGI8 421 aaKnown RBP2.58□□□□□ -2
RNU4-11P-201ENST00000365287 MFAP3LO75121 409 aa2.57□□□□□ -2
RNU4-11P-201ENST00000365287 RECQL4O94761 1208 aa2.57□□□□□ -2
RNU4-11P-201ENST00000365287 SOD2P04179 222 aa2.57□□□□□ -2
RNU4-11P-201ENST00000365287 MC4RP32245 332 aa2.57□□□□□ -2
RNU4-11P-201ENST00000365287 GPR85P60893 370 aa2.57□□□□□ -2
RNU4-11P-201ENST00000365287 MAP3K12Q12852 859 aa2.57□□□□□ -2
RNU4-11P-201ENST00000365287 GAGE13Q4V321 117 aa2.57□□□□□ -2
RNU4-11P-201ENST00000365287 KLHDC10Q6PID8 442 aa2.57□□□□□ -2
RNU4-11P-201ENST00000365287 USP53Q70EK8 1073 aa2.57□□□□□ -2
RNU4-11P-201ENST00000365287 FAM178BQ8IXR5 827 aa2.57□□□□□ -2
RNU4-11P-201ENST00000365287 ZNF654Q8IZM8 581 aa2.57□□□□□ -2
RNU4-11P-201ENST00000365287 MDGA1Q8NFP4 955 aa2.57□□□□□ -2
RNU4-11P-201ENST00000365287 CPLX3Q8WVH0 158 aa2.57□□□□□ -2
RNU4-11P-201ENST00000365287 GFM2Q969S9 779 aaKnown RBP2.57□□□□□ -2
RNU4-11P-201ENST00000365287 PGBD4Q96DM1 585 aa2.57□□□□□ -2
RNU4-11P-201ENST00000365287 MYEOVQ96EZ4 313 aa2.57□□□□□ -2
RNU4-11P-201ENST00000365287 COQ10AQ96MF6 247 aa2.57□□□□□ -2
RNU4-11P-201ENST00000365287 GPHA2Q96T91 129 aa2.57□□□□□ -2
RNU4-11P-201ENST00000365287 TCF25Q9BQ70 676 aa2.57□□□□□ -2
RNU4-11P-201ENST00000365287 LRFN3Q9BTN0 628 aa2.57□□□□□ -2
RNU4-11P-201ENST00000365287 AMNQ9BXJ7 453 aa2.57□□□□□ -2
RNU4-11P-201ENST00000365287 SYBUQ9NX95 663 aa2.57□□□□□ -2
RNU4-11P-201ENST00000365287 STRIP2Q9ULQ0 834 aa2.57□□□□□ -2
RNU4-11P-201ENST00000365287 ATP23Q9Y6H3 246 aa2.57□□□□□ -2
RNU4-11P-201ENST00000365287 COL3A1P02461 1466 aaPredicted RBP2.57□□□□□ -2
RNU4-11P-201ENST00000365287 CENPVL1A0A0U1RR11 272 aa2.56□□□□□ -2
RNU4-11P-201ENST00000365287 TCRBV5S4A2TA0A5A2 114 aa2.56□□□□□ -2
RNU4-11P-201ENST00000365287 DNAJC9-AS1A6NH13 148 aa2.56□□□□□ -2
RNU4-11P-201ENST00000365287 AGRPO00253 132 aa2.56□□□□□ -2
RNU4-11P-201ENST00000365287 H2AFYO75367 372 aaKnown RBP2.56□□□□□ -2
RNU4-11P-201ENST00000365287 ZFP36P26651 326 aaKnown RBP2.56□□□□□ -2
RNU4-11P-201ENST00000365287 STAT3P40763 770 aa2.56□□□□□ -2
RNU4-11P-201ENST00000365287 ADAM8P78325 824 aa2.56□□□□□ -2
RNU4-11P-201ENST00000365287 NHLH1Q02575 133 aa2.56□□□□□ -2
RNU4-11P-201ENST00000365287 ADAM15Q13444 863 aa2.56□□□□□ -2
RNU4-11P-201ENST00000365287 SP5Q6BEB4 398 aaPredicted RBP2.56□□□□□ -2
RNU4-11P-201ENST00000365287 LRSAM1Q6UWE0 723 aa2.56□□□□□ -2
RNU4-11P-201ENST00000365287 C6orf15Q6UXA7 325 aaPredicted RBP2.56□□□□□ -2
RNU4-11P-201ENST00000365287 ELOA2Q8IYF1 753 aaPredicted RBP2.56□□□□□ -2
RNU4-11P-201ENST00000365287 IFNL3Q8IZI9 196 aa2.56□□□□□ -2
RNU4-11P-201ENST00000365287 MB21D1Q8N884 522 aa2.56□□□□□ -2
RNU4-11P-201ENST00000365287 SPATA3Q8NHX4 192 aa2.56□□□□□ -2
RNU4-11P-201ENST00000365287 CPT1CQ8TCG5 803 aa2.56□□□□□ -2
RNU4-11P-201ENST00000365287 GCDHQ92947 438 aaPredicted RBP2.56□□□□□ -2
RNU4-11P-201ENST00000365287 ALG1Q9BT22 464 aa2.56□□□□□ -2
RNU4-11P-201ENST00000365287 IER2Q9BTL4 223 aa2.56□□□□□ -2
RNU4-11P-201ENST00000365287 BCL2L13Q9BXK5 485 aa2.56□□□□□ -2
RNU4-11P-201ENST00000365287 EPN3Q9H201 632 aa2.56□□□□□ -2
RNU4-11P-201ENST00000365287 SERHL2Q9H4I8 314 aa2.56□□□□□ -2
RNU4-11P-201ENST00000365287 IL23AQ9NPF7 189 aa2.56□□□□□ -2
RNU4-11P-201ENST00000365287 SORCS3Q9UPU3 1222 aa2.56□□□□□ -2
RNU4-11P-201ENST00000365287 UBE2QL1A1L167 161 aa2.55□□□□□ -2
RNU4-11P-201ENST00000365287 PRAMEF25A6NGN4 478 aa2.55□□□□□ -2
RNU4-11P-201ENST00000365287 KCNAB3O43448 404 aa2.55□□□□□ -2
RNU4-11P-201ENST00000365287 DLX3O60479 287 aa2.55□□□□□ -2
RNU4-11P-201ENST00000365287 C4BPAP04003 597 aaKnown RBP2.55□□□□□ -2
RNU4-11P-201ENST00000365287 GRIA2P42262 883 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms