RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 B3GALT1Q9Y5Z6 326 aa3.73□□□□□ -1.81
RNU4-42P-201ENST00000364738 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.72□□□□□ -1.81
RNU4-42P-201ENST00000364738 CYP27B1O15528 508 aa3.72□□□□□ -1.81
RNU4-42P-201ENST00000364738 ATP2B1P20020 1258 aa3.72□□□□□ -1.81
RNU4-42P-201ENST00000364738 APEX1P27695 318 aaKnown RBP3.72□□□□□ -1.81
RNU4-42P-201ENST00000364738 INHBCP55103 352 aa3.72□□□□□ -1.81
RNU4-42P-201ENST00000364738 INHBEP58166 350 aa3.72□□□□□ -1.81
RNU4-42P-201ENST00000364738 RIN1Q13671 783 aa3.72□□□□□ -1.81
RNU4-42P-201ENST00000364738 RASA3Q14644 834 aa3.72□□□□□ -1.81
RNU4-42P-201ENST00000364738 SMN1Q16637 294 aaKnown RBP3.72□□□□□ -1.81
RNU4-42P-201ENST00000364738 ZC3H12BQ5HYM0 836 aaKnown RBP3.72□□□□□ -1.81
RNU4-42P-201ENST00000364738 GSTCDQ8NEC7 633 aa3.72□□□□□ -1.81
RNU4-42P-201ENST00000364738 ERCC4Q92889 916 aaPredicted RBP3.72□□□□□ -1.81
RNU4-42P-201ENST00000364738 MAGEB10Q96LZ2 347 aaPredicted RBP3.72□□□□□ -1.81
RNU4-42P-201ENST00000364738 DEPDC7Q96QD5 511 aa3.72□□□□□ -1.81
RNU4-42P-201ENST00000364738 CEP89Q96ST8 783 aa3.72□□□□□ -1.81
RNU4-42P-201ENST00000364738 IKZF4Q9H2S9 585 aa3.72□□□□□ -1.81
RNU4-42P-201ENST00000364738 MMRN2Q9H8L6 949 aa3.72□□□□□ -1.81
RNU4-42P-201ENST00000364738 AGO3Q9H9G7 860 aaKnown RBP3.72□□□□□ -1.81
RNU4-42P-201ENST00000364738 IGSF5Q9NSI5 407 aa3.72□□□□□ -1.81
RNU4-42P-201ENST00000364738 A0A1W2PRX2 142 aa3.71□□□□□ -1.82
RNU4-42P-201ENST00000364738 PMS2P1A4D2B8 440 aa3.71□□□□□ -1.82
RNU4-42P-201ENST00000364738 MAFO75444 373 aaPredicted RBP3.71□□□□□ -1.82
RNU4-42P-201ENST00000364738 MAKP20794 623 aa3.71□□□□□ -1.82
RNU4-42P-201ENST00000364738 SDHAP31040 664 aa3.71□□□□□ -1.82
RNU4-42P-201ENST00000364738 STAT3P40763 770 aa3.71□□□□□ -1.82
RNU4-42P-201ENST00000364738 IRF9Q00978 393 aa3.71□□□□□ -1.82
RNU4-42P-201ENST00000364738 ADAM15Q13444 863 aa3.71□□□□□ -1.82
RNU4-42P-201ENST00000364738 CATSPEREQ5SY80 951 aa3.71□□□□□ -1.82
RNU4-42P-201ENST00000364738 FNDC7Q5VTL7 733 aa3.71□□□□□ -1.82
RNU4-42P-201ENST00000364738 OVCH1Q7RTY7 1134 aa3.71□□□□□ -1.82
RNU4-42P-201ENST00000364738 BRAPQ7Z569 592 aa3.71□□□□□ -1.82
RNU4-42P-201ENST00000364738 THEMISQ8N1K5 641 aaPredicted RBP3.71□□□□□ -1.82
RNU4-42P-201ENST00000364738 SLC7A14Q8TBB6 771 aa3.71□□□□□ -1.82
RNU4-42P-201ENST00000364738 DLG3Q92796 817 aa3.71□□□□□ -1.82
RNU4-42P-201ENST00000364738 PARPBPQ9NWS1 579 aa3.71□□□□□ -1.82
RNU4-42P-201ENST00000364738 CEP72Q9P209 647 aa3.71□□□□□ -1.82
RNU4-42P-201ENST00000364738 REXO2Q9Y3B8 237 aaKnown RBP3.71□□□□□ -1.82
RNU4-42P-201ENST00000364738 A0A087X1B8 175 aa3.7□□□□□ -1.82
RNU4-42P-201ENST00000364738 TCRBV16S1A1N1A0A5B0 115 aa3.7□□□□□ -1.82
RNU4-42P-201ENST00000364738 KRTAP23-1A1A580 65 aa3.7□□□□□ -1.82
RNU4-42P-201ENST00000364738 FAM221BA6H8Z2 402 aa3.7□□□□□ -1.82
RNU4-42P-201ENST00000364738 GOLGA6L22H0YM25 854 aa3.7□□□□□ -1.82
RNU4-42P-201ENST00000364738 GTF2F1P35269 517 aaKnown RBP eCLIP3.7□□□□□ -1.82
RNU4-42P-201ENST00000364738 PURAQ00577 322 aaKnown RBP3.7□□□□□ -1.82
RNU4-42P-201ENST00000364738 ALDH6A1Q02252 535 aaKnown RBP3.7□□□□□ -1.82
RNU4-42P-201ENST00000364738 SERINC3Q13530 473 aa3.7□□□□□ -1.82
RNU4-42P-201ENST00000364738 SAFB2Q14151 953 aaKnown RBP eCLIP3.7□□□□□ -1.82
RNU4-42P-201ENST00000364738 TMEM177Q53S58 311 aa3.7□□□□□ -1.82
RNU4-42P-201ENST00000364738 TRIM61Q5EBN2 209 aa3.7□□□□□ -1.82
RNU4-42P-201ENST00000364738 KLHDC10Q6PID8 442 aa3.7□□□□□ -1.82
RNU4-42P-201ENST00000364738 RTN4RL1Q86UN2 441 aaPredicted RBP3.7□□□□□ -1.82
RNU4-42P-201ENST00000364738 C2orf69Q8N8R5 385 aa3.7□□□□□ -1.82
RNU4-42P-201ENST00000364738 IGSF22Q8N9C0 903 aa3.7□□□□□ -1.82
RNU4-42P-201ENST00000364738 RABGGTAQ92696 567 aa3.7□□□□□ -1.82
RNU4-42P-201ENST00000364738 LPPQ93052 612 aa3.7□□□□□ -1.82
RNU4-42P-201ENST00000364738 SCLYQ96I15 445 aa3.7□□□□□ -1.82
RNU4-42P-201ENST00000364738 MPHOSPH9Q99550 1183 aa3.7□□□□□ -1.82
RNU4-42P-201ENST00000364738 FOXB1Q99853 325 aa3.7□□□□□ -1.82
RNU4-42P-201ENST00000364738 HIRIP3Q9BW71 556 aaPredicted RBP3.7□□□□□ -1.82
RNU4-42P-201ENST00000364738 BOCQ9BWV1 1114 aa3.7□□□□□ -1.82
RNU4-42P-201ENST00000364738 ZNF703Q9H7S9 590 aaPredicted RBP3.7□□□□□ -1.82
RNU4-42P-201ENST00000364738 SNTG2Q9NY99 539 aa3.7□□□□□ -1.82
RNU4-42P-201ENST00000364738 VWA7Q9Y334 891 aa3.7□□□□□ -1.82
RNU4-42P-201ENST00000364738 SH3BP1Q9Y3L3 701 aa3.7□□□□□ -1.82
RNU4-42P-201ENST00000364738 CTDP1Q9Y5B0 961 aaPredicted RBP3.7□□□□□ -1.82
RNU4-42P-201ENST00000364738 H2AFYO75367 372 aaKnown RBP3.69□□□□□ -1.82
RNU4-42P-201ENST00000364738 KRT37O76014 449 aa3.69□□□□□ -1.82
RNU4-42P-201ENST00000364738 SESN2P58004 480 aaPredicted RBP3.69□□□□□ -1.82
RNU4-42P-201ENST00000364738 ATP2C1P98194 919 aaPredicted RBP3.69□□□□□ -1.82
RNU4-42P-201ENST00000364738 ROM1Q03395 351 aa3.69□□□□□ -1.82
RNU4-42P-201ENST00000364738 RRP1BQ14684 758 aaKnown RBP3.69□□□□□ -1.82
RNU4-42P-201ENST00000364738 SPTY2D1Q68D10 685 aaPredicted RBP3.69□□□□□ -1.82
RNU4-42P-201ENST00000364738 ABHD17CQ6PCB6 329 aa3.69□□□□□ -1.82
RNU4-42P-201ENST00000364738 LRP10Q7Z4F1 713 aa3.69□□□□□ -1.82
RNU4-42P-201ENST00000364738 FGD2Q7Z6J4 655 aa3.69□□□□□ -1.82
RNU4-42P-201ENST00000364738 LDLRAD3Q86YD5 345 aa3.69□□□□□ -1.82
RNU4-42P-201ENST00000364738 TMPRSS6Q8IU80 811 aa3.69□□□□□ -1.82
RNU4-42P-201ENST00000364738 BCL6BQ8N143 479 aaPredicted RBP3.69□□□□□ -1.82
RNU4-42P-201ENST00000364738 ANKRD35Q8N283 1001 aa3.69□□□□□ -1.82
RNU4-42P-201ENST00000364738 ZSWIM2Q8NEG5 633 aa3.69□□□□□ -1.82
RNU4-42P-201ENST00000364738 OR5AN1Q8NGI8 311 aa3.69□□□□□ -1.82
RNU4-42P-201ENST00000364738 LARP4BQ92615 738 aaKnown RBP3.69□□□□□ -1.82
RNU4-42P-201ENST00000364738 GCDHQ92947 438 aaPredicted RBP3.69□□□□□ -1.82
RNU4-42P-201ENST00000364738 E2F7Q96AV8 911 aa3.69□□□□□ -1.82
RNU4-42P-201ENST00000364738 FOXRED1Q96CU9 486 aaPredicted RBP3.69□□□□□ -1.82
RNU4-42P-201ENST00000364738 SLC7A6OSQ96CW6 309 aaPredicted RBP3.69□□□□□ -1.82
RNU4-42P-201ENST00000364738 CLIP3Q96DZ5 547 aa3.69□□□□□ -1.82
RNU4-42P-201ENST00000364738 MRPL4Q9BYD3 311 aaKnown RBP3.69□□□□□ -1.82
RNU4-42P-201ENST00000364738 SAE1Q9UBE0 346 aaPredicted RBP3.69□□□□□ -1.82
RNU4-42P-201ENST00000364738 MAGEL2Q9UJ55 1249 aa3.69□□□□□ -1.82
RNU4-42P-201ENST00000364738 RBM8AQ9Y5S9 174 aaKnown RBP3.69□□□□□ -1.82
RNU4-42P-201ENST00000364738 E9PSI1 815 aa3.68□□□□□ -1.82
RNU4-42P-201ENST00000364738 NPTXRO95502 500 aa3.68□□□□□ -1.82
RNU4-42P-201ENST00000364738 RGS3P49796 1198 aa3.68□□□□□ -1.82
RNU4-42P-201ENST00000364738 ADCY7P51828 1080 aa3.68□□□□□ -1.82
RNU4-42P-201ENST00000364738 BPIFB4P59827 614 aa3.68□□□□□ -1.82
RNU4-42P-201ENST00000364738 SLC6A3Q01959 620 aa3.68□□□□□ -1.82
RNU4-42P-201ENST00000364738 CNGB1Q14028 1251 aaPredicted RBP3.68□□□□□ -1.82
RNU4-42P-201ENST00000364738 ACAP1Q15027 740 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms