RNA–Protein interactions for RNA: ENST00000361332.8

CTNND1-202, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-202ENST00000361332 MYOCDQ8IZQ8 938 aa8.9□□□□□ -0.98
CTNND1-202ENST00000361332 SPON2Q9BUD6 331 aa8.9□□□□□ -0.98
CTNND1-202ENST00000361332 GPBP1L1Q9HC44 474 aaPredicted RBP8.9□□□□□ -0.98
CTNND1-202ENST00000361332 DBNLQ9UJU6 430 aaKnown RBP8.9□□□□□ -0.98
CTNND1-202ENST00000361332 MAGI3Q5TCQ9 1506 aa8.9□□□□□ -0.98
CTNND1-202ENST00000361332 KRT75O95678 551 aa8.9□□□□□ -0.98
CTNND1-202ENST00000361332 SLFN14P0C7P3 912 aa8.9□□□□□ -0.98
CTNND1-202ENST00000361332 CYP4A11Q02928 519 aa8.9□□□□□ -0.98
CTNND1-202ENST00000361332 LRRC74AQ0VAA2 488 aa8.9□□□□□ -0.98
CTNND1-202ENST00000361332 ME3Q16798 604 aa8.9□□□□□ -0.98
CTNND1-202ENST00000361332 SIX5Q8N196 739 aa8.9□□□□□ -0.98
CTNND1-202ENST00000361332 SYT2Q8N9I0 419 aaPredicted RBP8.9□□□□□ -0.98
CTNND1-202ENST00000361332 USP28Q96RU2 1077 aa8.9□□□□□ -0.98
CTNND1-202ENST00000361332 TRIM54Q9BYV2 358 aa8.9□□□□□ -0.98
CTNND1-202ENST00000361332 PNMA3Q9UL41 463 aa8.9□□□□□ -0.98
CTNND1-202ENST00000361332 MAST1Q9Y2H9 1570 aa8.9□□□□□ -0.98
CTNND1-202ENST00000361332 POTEB3A0JP26 581 aa8.9□□□□□ -0.99
CTNND1-202ENST00000361332 DARSP14868 501 aaKnown RBP8.9□□□□□ -0.99
CTNND1-202ENST00000361332 DDX5P17844 614 aaKnown RBP8.9□□□□□ -0.99
CTNND1-202ENST00000361332 CA4P22748 312 aa8.9□□□□□ -0.99
CTNND1-202ENST00000361332 ANKS6Q68DC2 871 aa8.9□□□□□ -0.99
CTNND1-202ENST00000361332 FAM117BQ6P1L5 589 aa8.9□□□□□ -0.99
CTNND1-202ENST00000361332 SLC30A9Q6PML9 568 aa8.9□□□□□ -0.99
CTNND1-202ENST00000361332 POTEBQ6S5H4 581 aa8.9□□□□□ -0.99
CTNND1-202ENST00000361332 KLHL24Q6TFL4 600 aa8.9□□□□□ -0.99
CTNND1-202ENST00000361332 ZNF280CQ8ND82 737 aa8.9□□□□□ -0.99
CTNND1-202ENST00000361332 NT5C1BQ96P26 610 aa8.9□□□□□ -0.99
CTNND1-202ENST00000361332 SMAD5Q99717 465 aaKnown RBP8.9□□□□□ -0.99
CTNND1-202ENST00000361332 TMEM161AQ9NX61 479 aa8.9□□□□□ -0.99
CTNND1-202ENST00000361332 CAB39Q9Y376 341 aaPredicted RBP8.9□□□□□ -0.99
CTNND1-202ENST00000361332 DAB1O75553 588 aa8.9□□□□□ -0.99
CTNND1-202ENST00000361332 NUP62P37198 522 aaPredicted RBP8.9□□□□□ -0.99
CTNND1-202ENST00000361332 SLC7A5Q01650 507 aa8.9□□□□□ -0.99
CTNND1-202ENST00000361332 MRPL28Q13084 256 aaKnown RBP8.9□□□□□ -0.99
CTNND1-202ENST00000361332 NR5A1Q13285 461 aa8.9□□□□□ -0.99
CTNND1-202ENST00000361332 MESDQ14696 234 aa8.9□□□□□ -0.99
CTNND1-202ENST00000361332 MTERF2Q49AM1 385 aa8.9□□□□□ -0.99
CTNND1-202ENST00000361332 ALFQ53S48 1182 aa8.9□□□□□ -0.99
CTNND1-202ENST00000361332 TWF2Q6IBS0 349 aaKnown RBP8.9□□□□□ -0.99
CTNND1-202ENST00000361332 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.9□□□□□ -0.99
CTNND1-202ENST00000361332 MAML1Q92585 1016 aa8.9□□□□□ -0.99
CTNND1-202ENST00000361332 L3MBTL3Q96JM7 780 aaPredicted RBP8.9□□□□□ -0.99
CTNND1-202ENST00000361332 NLRP4Q96MN2 994 aa8.9□□□□□ -0.99
CTNND1-202ENST00000361332 PITPNM3Q9BZ71 974 aa8.9□□□□□ -0.99
CTNND1-202ENST00000361332 GTF2A1LQ9UNN4 478 aa8.9□□□□□ -0.99
CTNND1-202ENST00000361332 FPGT-TNNI3KV9GXZ4 949 aa8.9□□□□□ -0.99
CTNND1-202ENST00000361332 ADAMTS12P58397 1594 aa8.9□□□□□ -0.99
CTNND1-202ENST00000361332 KIF24Q5T7B8 1368 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 C5orf58C9J3I9 102 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 MYO1FO00160 1098 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 COBLO75128 1261 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 RXRBP28702 533 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 TRPC1P48995 793 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 RBL2Q08999 1139 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 ALKBH2Q6NS38 261 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 C11orf74Q86VG3 221 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 CATSPER3Q86XQ3 398 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 HS6ST3Q8IZP7 471 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 RPF1Q9H9Y2 349 aaKnown RBP8.89□□□□□ -0.99
CTNND1-202ENST00000361332 KLC4Q9NSK0 619 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 GALNT8Q9NY28 637 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 PCDHA12Q9UN75 941 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 MT-ND3P03897 115 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 MFSD14CQ5VZR4 134 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 C11orf96Q7Z7L8 435 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 THOC1Q96FV9 657 aaKnown RBP8.89□□□□□ -0.99
CTNND1-202ENST00000361332 KLC2Q9H0B6 622 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 CMA1P23946 247 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 TMED10P49755 219 aaKnown RBP8.89□□□□□ -0.99
CTNND1-202ENST00000361332 EIF3BP55884 814 aaKnown RBP8.89□□□□□ -0.99
CTNND1-202ENST00000361332 HDLBPQ00341 1268 aaKnown RBP8.89□□□□□ -0.99
CTNND1-202ENST00000361332 SPATA5Q8NB90 893 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 HSPH1Q92598 858 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 XAGE2Q96GT9 111 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 KDM4CQ9H3R0 1056 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 RUBCNLQ9H714 662 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 SEL1LQ9UBV2 794 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 KLF15Q9UIH9 416 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 ATP5HO75947 161 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 TRIM37O94972 964 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 UPP2O95045 317 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 PPP3CCP48454 512 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 COPB1P53618 953 aaKnown RBP8.89□□□□□ -0.99
CTNND1-202ENST00000361332 SLFN13Q68D06 897 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 TRIM69Q86WT6 500 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 KRT78Q8N1N4 520 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 NEK9Q8TD19 979 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 CENPTQ96BT3 561 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 ZNF577Q9BSK1 485 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 ING2Q9H160 280 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 ARMCX3Q9UH62 379 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-202ENST00000361332 CNOT7Q9UIV1 285 aaKnown RBP8.89□□□□□ -0.99
CTNND1-202ENST00000361332 ZNF229Q9UJW7 825 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 KDM6BO15054 1643 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 PRR23AA6NEV1 266 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 FYNP06241 537 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 NDUFA8P51970 172 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 TAF1BQ53T94 588 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-202ENST00000361332 MFN1Q8IWA4 741 aa8.89□□□□□ -0.99
CTNND1-202ENST00000361332 CEP170P1Q96L14 293 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms