RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 PRDM10Q9NQV6 1147 aa8.17□□□□□ -1.1
CLCN3-202ENST00000360642 ZNF446Q9NWS9 450 aa8.17□□□□□ -1.1
CLCN3-202ENST00000360642 KCNH4Q9UQ05 1017 aa8.17□□□□□ -1.1
CLCN3-202ENST00000360642 EP400Q96L91 3159 aa8.17□□□□□ -1.1
CLCN3-202ENST00000360642 SELPP16109 830 aa8.17□□□□□ -1.1
CLCN3-202ENST00000360642 PCBP4P57723 403 aaKnown RBP8.17□□□□□ -1.1
CLCN3-202ENST00000360642 WWC2Q6AWC2 1192 aa8.17□□□□□ -1.1
CLCN3-202ENST00000360642 WDR24Q96S15 920 aa8.17□□□□□ -1.1
CLCN3-202ENST00000360642 MKNK2Q9HBH9 465 aa8.17□□□□□ -1.1
CLCN3-202ENST00000360642 TMEM260Q9NX78 707 aa8.17□□□□□ -1.1
CLCN3-202ENST00000360642 BARHL2Q9NY43 387 aa8.17□□□□□ -1.1
CLCN3-202ENST00000360642 CTNND2Q9UQB3 1225 aa8.17□□□□□ -1.1
CLCN3-202ENST00000360642 NAV1Q8NEY1 1877 aa8.17□□□□□ -1.1
CLCN3-202ENST00000360642 DDX60LQ5H9U9 1706 aaKnown RBP8.16□□□□□ -1.1
CLCN3-202ENST00000360642 STXBP3O00186 592 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 PDGFRBP09619 1106 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 DMTNQ08495 405 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 INPP5AQ14642 412 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 TRAPPC3LQ5T215 181 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 UTP14CQ5TAP6 766 aaKnown RBP8.16□□□□□ -1.1
CLCN3-202ENST00000360642 ZNF804AQ7Z570 1209 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 TGFBRAP1Q8WUH2 860 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 TMEM47Q9BQJ4 181 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 KCNQ5Q9NR82 932 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 HCSTQ9UBK5 93 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 KLHL3Q9UH77 587 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 TRIM33Q9UPN9 1127 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 CDK5RAP2Q96SN8 1893 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 TOM1O60784 492 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 MFAP3LO75121 409 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 TADA3O75528 432 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 RPN1P04843 607 aaKnown RBP8.16□□□□□ -1.1
CLCN3-202ENST00000360642 GYPCP04921 128 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 FAM153BP0C7A2 387 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 TSPY3P0CV98 308 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 TSPY8P0CW00 308 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 CPB1P15086 417 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 RFC4P35249 363 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 PIP4K2BP78356 416 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 MTF1Q14872 753 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 KRT31Q15323 416 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 RRAGBQ5VZM2 374 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 RAD9BQ6WBX8 426 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 ZNF444Q8N0Y2 327 aaPredicted RBP8.16□□□□□ -1.1
CLCN3-202ENST00000360642 NXPE3Q969Y0 559 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 LZTS2Q9BRK4 669 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 DISC1Q9NRI5 854 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 RMND1Q9NWS8 449 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 PRDM4Q9UKN5 801 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 GPR75-ASB3A0A0A6YYF3 556 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 LOC102724159A0A0B4J2E5 919 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 EFCAB8A8MWE9 144 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 KATNA1O75449 491 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 URI1O94763 535 aaPredicted RBP8.16□□□□□ -1.1
CLCN3-202ENST00000360642 LDHCP07864 332 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 IL1R1P14778 569 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 CDC25AP30304 524 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 NOVP48745 357 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 PAK1Q13153 545 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 PWP2Q15269 919 aaKnown RBP8.16□□□□□ -1.1
CLCN3-202ENST00000360642 CRY2Q49AN0 593 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 FILIP1LQ4L180 1135 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 SLC44A5Q8NCS7 719 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 CCDC148Q8NFR7 591 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 CCDC51Q96ER9 411 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 DESI2Q9BSY9 194 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 GTPBP4Q9BZE4 634 aaKnown RBP8.16□□□□□ -1.1
CLCN3-202ENST00000360642 TMEM60Q9H2L4 133 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 MRPL44Q9H9J2 332 aaKnown RBP8.16□□□□□ -1.1
CLCN3-202ENST00000360642 NAGPAQ9UK23 515 aa8.16□□□□□ -1.1
CLCN3-202ENST00000360642 SNED1Q8TER0 1413 aa8.15□□□□□ -1.1
CLCN3-202ENST00000360642 LAD1O00515 517 aa8.15□□□□□ -1.1
CLCN3-202ENST00000360642 EGFRP00533 1210 aa8.15□□□□□ -1.1
CLCN3-202ENST00000360642 MYL1P05976 194 aa8.15□□□□□ -1.1
CLCN3-202ENST00000360642 CCDC175P0C221 793 aa8.15□□□□□ -1.1
CLCN3-202ENST00000360642 POU3F3P20264 500 aaPredicted RBP8.15□□□□□ -1.1
CLCN3-202ENST00000360642 CASQ1P31415 396 aa8.15□□□□□ -1.1
CLCN3-202ENST00000360642 CASP14P31944 242 aa8.15□□□□□ -1.1
CLCN3-202ENST00000360642 PRPHP41219 470 aa8.15□□□□□ -1.1
CLCN3-202ENST00000360642 PRCPP42785 496 aa8.15□□□□□ -1.1
CLCN3-202ENST00000360642 GNG11P61952 73 aa8.15□□□□□ -1.1
CLCN3-202ENST00000360642 GPSM2P81274 684 aa8.15□□□□□ -1.1
CLCN3-202ENST00000360642 KARSQ15046 597 aaKnown RBP8.15□□□□□ -1.1
CLCN3-202ENST00000360642 TCP11X2Q5H9J9 407 aa8.15□□□□□ -1.1
CLCN3-202ENST00000360642 TDRD10Q5VZ19 366 aaKnown RBP8.15□□□□□ -1.1
CLCN3-202ENST00000360642 C16orf86Q6ZW13 317 aa8.15□□□□□ -1.1
CLCN3-202ENST00000360642 RASGRP2Q7LDG7 609 aa8.15□□□□□ -1.1
CLCN3-202ENST00000360642 PPFIBP1Q86W92 1011 aa8.15□□□□□ -1.1
CLCN3-202ENST00000360642 AMOTL1Q8IY63 956 aa8.15□□□□□ -1.1
CLCN3-202ENST00000360642 SPZ1Q9BXG8 430 aa8.15□□□□□ -1.1
CLCN3-202ENST00000360642 CCSER1Q9C0I3 900 aa8.15□□□□□ -1.1
CLCN3-202ENST00000360642 ZMYND12Q9H0C1 365 aa8.15□□□□□ -1.1
CLCN3-202ENST00000360642 CD209Q9NNX6 404 aa8.15□□□□□ -1.1
CLCN3-202ENST00000360642 MRFAP1Q9Y605 127 aa8.15□□□□□ -1.1
CLCN3-202ENST00000360642 CCDC194A0A1B0GVG4 234 aa8.15□□□□□ -1.11
CLCN3-202ENST00000360642 NPHP1O15259 732 aa8.15□□□□□ -1.11
CLCN3-202ENST00000360642 ACRP10323 421 aa8.15□□□□□ -1.11
CLCN3-202ENST00000360642 STAT6P42226 847 aa8.15□□□□□ -1.11
CLCN3-202ENST00000360642 FXR1P51114 621 aaKnown RBP eCLIP8.15□□□□□ -1.11
CLCN3-202ENST00000360642 KCNB1Q14721 858 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms