RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 CNOT6LQ96LI5 555 aaKnown RBP15.27■□□□□ 0.04
CSNK1E-201ENST00000359867 IWS1Q96ST2 819 aa15.27■□□□□ 0.04
CSNK1E-201ENST00000359867 ZSWIM4Q9H7M6 989 aa15.27■□□□□ 0.04
CSNK1E-201ENST00000359867 JADE2Q9NQC1 790 aa15.27■□□□□ 0.04
CSNK1E-201ENST00000359867 MGAMO43451 1857 aa15.27■□□□□ 0.03
CSNK1E-201ENST00000359867 TRIM66O15016 1216 aa15.27■□□□□ 0.03
CSNK1E-201ENST00000359867 SORBS3O60504 671 aa15.27■□□□□ 0.03
CSNK1E-201ENST00000359867 EDNRBP24530 442 aa15.27■□□□□ 0.03
CSNK1E-201ENST00000359867 PSMC4P43686 418 aa15.27■□□□□ 0.03
CSNK1E-201ENST00000359867 MORN1Q5T089 497 aa15.27■□□□□ 0.03
CSNK1E-201ENST00000359867 SEPT14Q6ZU15 432 aa15.27■□□□□ 0.03
CSNK1E-201ENST00000359867 INPP4AQ96PE3 977 aaPredicted RBP15.27■□□□□ 0.03
CSNK1E-201ENST00000359867 HSD17B14Q9BPX1 270 aa15.27■□□□□ 0.03
CSNK1E-201ENST00000359867 ZNF577Q9BSK1 485 aa15.27■□□□□ 0.03
CSNK1E-201ENST00000359867 IRX2Q9BZI1 471 aaPredicted RBP15.27■□□□□ 0.03
CSNK1E-201ENST00000359867 PCDHA2Q9Y5H9 948 aa15.27■□□□□ 0.03
CSNK1E-201ENST00000359867 GOLGA6L9A6NEM1 432 aa15.26■□□□□ 0.03
CSNK1E-201ENST00000359867 SLC15A5A6NIM6 579 aa15.26■□□□□ 0.03
CSNK1E-201ENST00000359867 DDX39AO00148 427 aaKnown RBP15.26■□□□□ 0.03
CSNK1E-201ENST00000359867 IPO5O00410 1097 aaKnown RBP15.26■□□□□ 0.03
CSNK1E-201ENST00000359867 ATP9AO75110 1047 aa15.26■□□□□ 0.03
CSNK1E-201ENST00000359867 ZRANB2O95218 330 aaKnown RBP eCLIP15.26■□□□□ 0.03
CSNK1E-201ENST00000359867 EYA4O95677 639 aa15.26■□□□□ 0.03
CSNK1E-201ENST00000359867 CYP2B6P20813 491 aa15.26■□□□□ 0.03
CSNK1E-201ENST00000359867 CASQ1P31415 396 aa15.26■□□□□ 0.03
CSNK1E-201ENST00000359867 CASP14P31944 242 aa15.26■□□□□ 0.03
CSNK1E-201ENST00000359867 ARSHQ5FYA8 562 aa15.26■□□□□ 0.03
CSNK1E-201ENST00000359867 FBXO16Q8IX29 292 aaPredicted RBP15.26■□□□□ 0.03
CSNK1E-201ENST00000359867 BCAS3Q9H6U6 928 aa15.26■□□□□ 0.03
CSNK1E-201ENST00000359867 ARGLU1Q9NWB6 273 aaPredicted RBP15.26■□□□□ 0.03
CSNK1E-201ENST00000359867 EML1O00423 815 aa15.26■□□□□ 0.03
CSNK1E-201ENST00000359867 GAS7O60861 476 aa15.26■□□□□ 0.03
CSNK1E-201ENST00000359867 KRT18P05783 430 aaKnown RBP15.26■□□□□ 0.03
CSNK1E-201ENST00000359867 SP3Q02447 781 aa15.26■□□□□ 0.03
CSNK1E-201ENST00000359867 MAML3Q96JK9 1138 aa15.26■□□□□ 0.03
CSNK1E-201ENST00000359867 RIT2Q99578 217 aa15.26■□□□□ 0.03
CSNK1E-201ENST00000359867 DOCK5Q9H7D0 1870 aa15.26■□□□□ 0.03
CSNK1E-201ENST00000359867 A0A0U1RQJ8 604 aa15.25■□□□□ 0.03
CSNK1E-201ENST00000359867 CHMP2AO43633 222 aa15.25■□□□□ 0.03
CSNK1E-201ENST00000359867 EIF3JO75822 258 aaKnown RBP15.25■□□□□ 0.03
CSNK1E-201ENST00000359867 SASH3O75995 380 aa15.25■□□□□ 0.03
CSNK1E-201ENST00000359867 MTIF2P46199 727 aaKnown RBP15.25■□□□□ 0.03
CSNK1E-201ENST00000359867 PSMC6P62333 389 aa15.25■□□□□ 0.03
CSNK1E-201ENST00000359867 MAP2K5Q13163 448 aa15.25■□□□□ 0.03
CSNK1E-201ENST00000359867 ITGB3BPQ13352 177 aaPredicted RBP15.25■□□□□ 0.03
CSNK1E-201ENST00000359867 GIT2Q14161 759 aa15.25■□□□□ 0.03
CSNK1E-201ENST00000359867 HERC4Q5GLZ8 1057 aaPredicted RBP15.25■□□□□ 0.03
CSNK1E-201ENST00000359867 XRRA1Q6P2D8 792 aa15.25■□□□□ 0.03
CSNK1E-201ENST00000359867 ARMCX2Q7L311 632 aa15.25■□□□□ 0.03
CSNK1E-201ENST00000359867 CPLX3Q8WVH0 158 aa15.25■□□□□ 0.03
CSNK1E-201ENST00000359867 ATRIPQ8WXE1 791 aa15.25■□□□□ 0.03
CSNK1E-201ENST00000359867 NUP58Q9BVL2 599 aa15.25■□□□□ 0.03
CSNK1E-201ENST00000359867 TEKT3Q9BXF9 490 aa15.25■□□□□ 0.03
CSNK1E-201ENST00000359867 AGO4Q9HCK5 861 aaKnown RBP15.25■□□□□ 0.03
CSNK1E-201ENST00000359867 FXR1P51114 621 aaKnown RBP eCLIP15.25■□□□□ 0.03
CSNK1E-201ENST00000359867 CCL14Q16627 93 aa15.25■□□□□ 0.03
CSNK1E-201ENST00000359867 RETREG2Q8NC44 543 aa15.25■□□□□ 0.03
CSNK1E-201ENST00000359867 IQCDQ96DY2 449 aa15.25■□□□□ 0.03
CSNK1E-201ENST00000359867 GJD2Q9UKL4 321 aa15.25■□□□□ 0.03
CSNK1E-201ENST00000359867 ZNF236Q9UL36 1845 aa15.24■□□□□ 0.03
CSNK1E-201ENST00000359867 EFCAB8A8MWE9 144 aa15.24■□□□□ 0.03
CSNK1E-201ENST00000359867 PPP2R3AQ06190 1150 aa15.24■□□□□ 0.03
CSNK1E-201ENST00000359867 EPHA7Q15375 998 aa15.24■□□□□ 0.03
CSNK1E-201ENST00000359867 ZCWPW2Q504Y3 356 aa15.24■□□□□ 0.03
CSNK1E-201ENST00000359867 B3GNT9Q6UX72 402 aa15.24■□□□□ 0.03
CSNK1E-201ENST00000359867 NLRX1Q86UT6 975 aa15.24■□□□□ 0.03
CSNK1E-201ENST00000359867 NOC4LQ9BVI4 516 aaKnown RBP15.24■□□□□ 0.03
CSNK1E-201ENST00000359867 RASSF4Q9H2L5 321 aa15.24■□□□□ 0.03
CSNK1E-201ENST00000359867 FLRT1Q9NZU1 646 aa15.24■□□□□ 0.03
CSNK1E-201ENST00000359867 LCMT1Q9UIC8 334 aa15.24■□□□□ 0.03
CSNK1E-201ENST00000359867 GABRQQ9UN88 632 aa15.24■□□□□ 0.03
CSNK1E-201ENST00000359867 SLITRK3O94933 977 aa15.24■□□□□ 0.03
CSNK1E-201ENST00000359867 FCGRTP55899 365 aa15.24■□□□□ 0.03
CSNK1E-201ENST00000359867 FKBP3Q00688 224 aaKnown RBP15.24■□□□□ 0.03
CSNK1E-201ENST00000359867 TBC1D8BQ0IIM8 1120 aa15.24■□□□□ 0.03
CSNK1E-201ENST00000359867 TMTC1Q8IUR5 882 aa15.24■□□□□ 0.03
CSNK1E-201ENST00000359867 C10orf67Q8IYJ2 551 aa15.24■□□□□ 0.03
CSNK1E-201ENST00000359867 NEK11Q8NG66 645 aa15.24■□□□□ 0.03
CSNK1E-201ENST00000359867 CD99L2Q8TCZ2 262 aa15.24■□□□□ 0.03
CSNK1E-201ENST00000359867 NEK9Q8TD19 979 aa15.24■□□□□ 0.03
CSNK1E-201ENST00000359867 GPRASP2Q96D09 838 aa15.24■□□□□ 0.03
CSNK1E-201ENST00000359867 CFHR5Q9BXR6 569 aa15.24■□□□□ 0.03
CSNK1E-201ENST00000359867 NPHP3-ACAD11A0A0J9YXS1 232 aa15.23■□□□□ 0.03
CSNK1E-201ENST00000359867 B4DLN1 442 aa15.23■□□□□ 0.03
CSNK1E-201ENST00000359867 SP2Q02086 613 aa15.23■□□□□ 0.03
CSNK1E-201ENST00000359867 LRRC41Q15345 812 aa15.23■□□□□ 0.03
CSNK1E-201ENST00000359867 GNPTABQ3T906 1256 aa15.23■□□□□ 0.03
CSNK1E-201ENST00000359867 MIIPQ5JXC2 388 aa15.23■□□□□ 0.03
CSNK1E-201ENST00000359867 TMEM63BQ5T3F8 832 aa15.23■□□□□ 0.03
CSNK1E-201ENST00000359867 PPP4R3CPQ6ZMV5 832 aa15.23■□□□□ 0.03
CSNK1E-201ENST00000359867 LRRC55Q6ZSA7 311 aa15.23■□□□□ 0.03
CSNK1E-201ENST00000359867 USP6NLQ92738 828 aa15.23■□□□□ 0.03
CSNK1E-201ENST00000359867 CEP63Q96MT8 703 aa15.23■□□□□ 0.03
CSNK1E-201ENST00000359867 ERGIC2Q96RQ1 377 aa15.23■□□□□ 0.03
CSNK1E-201ENST00000359867 MRPL44Q9H9J2 332 aaKnown RBP15.23■□□□□ 0.03
CSNK1E-201ENST00000359867 LZTFL1Q9NQ48 299 aa15.23■□□□□ 0.03
CSNK1E-201ENST00000359867 PDGFCQ9NRA1 345 aa15.23■□□□□ 0.03
CSNK1E-201ENST00000359867 ABHD10Q9NUJ1 306 aa15.23■□□□□ 0.03
CSNK1E-201ENST00000359867 RGL1Q9NZL6 768 aa15.23■□□□□ 0.03
CSNK1E-201ENST00000359867 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms