RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 KAT6AQ92794 2004 aa13.8□□□□□ -0.2
NIF3L1-201ENST00000359683 LOXHD1Q8IVV2 1947 aa13.8□□□□□ -0.2
NIF3L1-201ENST00000359683 KINO60870 393 aaKnown RBP13.8□□□□□ -0.2
NIF3L1-201ENST00000359683 MAFO75444 373 aaPredicted RBP13.8□□□□□ -0.2
NIF3L1-201ENST00000359683 CYP11B2P19099 503 aa13.8□□□□□ -0.2
NIF3L1-201ENST00000359683 RFC5P40937 340 aa13.8□□□□□ -0.2
NIF3L1-201ENST00000359683 CHMP4BP1P59074 171 aa13.8□□□□□ -0.2
NIF3L1-201ENST00000359683 MDM2Q00987 491 aaPredicted RBP13.8□□□□□ -0.2
NIF3L1-201ENST00000359683 PTPN11Q06124 597 aaPredicted RBP13.8□□□□□ -0.2
NIF3L1-201ENST00000359683 HIC1Q14526 733 aa13.8□□□□□ -0.2
NIF3L1-201ENST00000359683 DHX8Q14562 1220 aaKnown RBP13.8□□□□□ -0.2
NIF3L1-201ENST00000359683 ARSHQ5FYA8 562 aa13.8□□□□□ -0.2
NIF3L1-201ENST00000359683 MARCH8Q5T0T0 291 aa13.8□□□□□ -0.2
NIF3L1-201ENST00000359683 C7orf31Q8N865 590 aa13.8□□□□□ -0.2
NIF3L1-201ENST00000359683 LRRC27Q9C0I9 530 aa13.8□□□□□ -0.2
NIF3L1-201ENST00000359683 STARD7Q9NQZ5 370 aa13.8□□□□□ -0.2
NIF3L1-201ENST00000359683 SETD4Q9NVD3 440 aa13.8□□□□□ -0.2
NIF3L1-201ENST00000359683 KCND2Q9NZV8 630 aa13.8□□□□□ -0.2
NIF3L1-201ENST00000359683 IGKV6-21A0A0C4DH24 114 aa13.79□□□□□ -0.2
NIF3L1-201ENST00000359683 A0A0U1RQG5 324 aaPredicted RBP13.79□□□□□ -0.2
NIF3L1-201ENST00000359683 MBLAC1A4D2B0 266 aaPredicted RBP13.79□□□□□ -0.2
NIF3L1-201ENST00000359683 MYMKA6NI61 221 aa13.79□□□□□ -0.2
NIF3L1-201ENST00000359683 MAGEB2O15479 319 aa13.79□□□□□ -0.2
NIF3L1-201ENST00000359683 ABCB7O75027 752 aa13.79□□□□□ -0.2
NIF3L1-201ENST00000359683 DGAT1O75907 488 aa13.79□□□□□ -0.2
NIF3L1-201ENST00000359683 SSBP05455 408 aaKnown RBP eCLIP13.79□□□□□ -0.2
NIF3L1-201ENST00000359683 KLRC1P26715 233 aa13.79□□□□□ -0.2
NIF3L1-201ENST00000359683 CDK7P50613 346 aa13.79□□□□□ -0.2
NIF3L1-201ENST00000359683 AMPD3Q01432 767 aa13.79□□□□□ -0.2
NIF3L1-201ENST00000359683 CNNM4Q6P4Q7 775 aa13.79□□□□□ -0.2
NIF3L1-201ENST00000359683 EXOC8Q8IYI6 725 aa13.79□□□□□ -0.2
NIF3L1-201ENST00000359683 PPP1R13LQ8WUF5 828 aa13.79□□□□□ -0.2
NIF3L1-201ENST00000359683 LMBR1Q8WVP7 490 aa13.79□□□□□ -0.2
NIF3L1-201ENST00000359683 TRAPPC12Q8WVT3 735 aa13.79□□□□□ -0.2
NIF3L1-201ENST00000359683 STAMQ92783 540 aa13.79□□□□□ -0.2
NIF3L1-201ENST00000359683 CCDC43Q96MW1 224 aaKnown RBP13.79□□□□□ -0.2
NIF3L1-201ENST00000359683 C7orf25Q9BPX7 421 aa13.79□□□□□ -0.2
NIF3L1-201ENST00000359683 RUSC1Q9BVN2 902 aa13.79□□□□□ -0.2
NIF3L1-201ENST00000359683 GTF2IRD1Q9UHL9 959 aa13.79□□□□□ -0.2
NIF3L1-201ENST00000359683 C17orf102A2RUQ5 167 aa13.79□□□□□ -0.2
NIF3L1-201ENST00000359683 ARVCFO00192 962 aa13.79□□□□□ -0.2
NIF3L1-201ENST00000359683 C22orf31O95567 290 aa13.79□□□□□ -0.2
NIF3L1-201ENST00000359683 GNAT1P11488 350 aa13.79□□□□□ -0.2
NIF3L1-201ENST00000359683 GUCY2CP25092 1073 aa13.79□□□□□ -0.2
NIF3L1-201ENST00000359683 AFMP43652 599 aa13.79□□□□□ -0.2
NIF3L1-201ENST00000359683 IGBP1P78318 339 aa13.79□□□□□ -0.2
NIF3L1-201ENST00000359683 TBC1D8BQ0IIM8 1120 aa13.79□□□□□ -0.2
NIF3L1-201ENST00000359683 MTHFD1LQ6UB35 978 aa13.79□□□□□ -0.2
NIF3L1-201ENST00000359683 GPBP1Q86WP2 473 aa13.79□□□□□ -0.2
NIF3L1-201ENST00000359683 DIS3LQ8TF46 1054 aaKnown RBP13.79□□□□□ -0.2
NIF3L1-201ENST00000359683 CCDC34Q96HJ3 373 aa13.79□□□□□ -0.2
NIF3L1-201ENST00000359683 SENP6Q9GZR1 1112 aaPredicted RBP13.79□□□□□ -0.2
NIF3L1-201ENST00000359683 XPNPEP1Q9NQW7 623 aa13.79□□□□□ -0.2
NIF3L1-201ENST00000359683 GTPBP6O43824 516 aaPredicted RBP13.78□□□□□ -0.2
NIF3L1-201ENST00000359683 USO1O60763 962 aaKnown RBP13.78□□□□□ -0.2
NIF3L1-201ENST00000359683 MYL1P05976 194 aa13.78□□□□□ -0.2
NIF3L1-201ENST00000359683 POLGP54098 1239 aaPredicted RBP13.78□□□□□ -0.2
NIF3L1-201ENST00000359683 GIT2Q14161 759 aa13.78□□□□□ -0.2
NIF3L1-201ENST00000359683 KLHL40Q2TBA0 621 aa13.78□□□□□ -0.2
NIF3L1-201ENST00000359683 SKOR2Q2VWA4 1001 aaPredicted RBP13.78□□□□□ -0.2
NIF3L1-201ENST00000359683 GDF6Q6KF10 455 aaPredicted RBP13.78□□□□□ -0.2
NIF3L1-201ENST00000359683 SLC39A5Q6ZMH5 540 aa13.78□□□□□ -0.2
NIF3L1-201ENST00000359683 GRAMD1CQ8IYS0 662 aa13.78□□□□□ -0.2
NIF3L1-201ENST00000359683 LINC01465Q8N7H1 131 aa13.78□□□□□ -0.2
NIF3L1-201ENST00000359683 SLC7A3Q8WY07 619 aa13.78□□□□□ -0.2
NIF3L1-201ENST00000359683 DDX12PQ92771 950 aa13.78□□□□□ -0.2
NIF3L1-201ENST00000359683 DNAJC19Q96DA6 116 aa13.78□□□□□ -0.2
NIF3L1-201ENST00000359683 PAWRQ96IZ0 340 aaKnown RBP13.78□□□□□ -0.2
NIF3L1-201ENST00000359683 JPH2Q9BR39 696 aaPredicted RBP13.78□□□□□ -0.2
NIF3L1-201ENST00000359683 TIPINQ9BVW5 301 aa13.78□□□□□ -0.2
NIF3L1-201ENST00000359683 TRIM9Q9C026 710 aa13.78□□□□□ -0.2
NIF3L1-201ENST00000359683 ATP6V0A4Q9HBG4 840 aa13.78□□□□□ -0.2
NIF3L1-201ENST00000359683 PLSCR2Q9NRY7 297 aa13.78□□□□□ -0.2
NIF3L1-201ENST00000359683 BMP2KQ9NSY1 1161 aaPredicted RBP13.78□□□□□ -0.2
NIF3L1-201ENST00000359683 PCDHA2Q9Y5H9 948 aa13.78□□□□□ -0.2
NIF3L1-201ENST00000359683 ARID2Q68CP9 1835 aa13.78□□□□□ -0.2
NIF3L1-201ENST00000359683 TREHO43280 583 aa13.77□□□□□ -0.21
NIF3L1-201ENST00000359683 GAS2O43903 313 aaKnown RBP13.77□□□□□ -0.21
NIF3L1-201ENST00000359683 ZNF200P98182 395 aaPredicted RBP13.77□□□□□ -0.21
NIF3L1-201ENST00000359683 MKRN4PQ13434 485 aaPredicted RBP13.77□□□□□ -0.21
NIF3L1-201ENST00000359683 CUL4BQ13620 913 aa13.77□□□□□ -0.21
NIF3L1-201ENST00000359683 EMC2Q15006 297 aa13.77□□□□□ -0.21
NIF3L1-201ENST00000359683 FAM47CQ5HY64 1035 aa13.77□□□□□ -0.21
NIF3L1-201ENST00000359683 C1orf53Q5VUE5 145 aa13.77□□□□□ -0.21
NIF3L1-201ENST00000359683 EFCAB12Q6NXP0 572 aa13.77□□□□□ -0.21
NIF3L1-201ENST00000359683 MCPH1Q8NEM0 835 aa13.77□□□□□ -0.21
NIF3L1-201ENST00000359683 CLSTN2Q9H4D0 955 aa13.77□□□□□ -0.21
NIF3L1-201ENST00000359683 C11orf49Q9H6J7 331 aa13.77□□□□□ -0.21
NIF3L1-201ENST00000359683 TUBE1Q9UJT0 475 aa13.77□□□□□ -0.21
NIF3L1-201ENST00000359683 TRIP12Q14669 1992 aaPredicted RBP13.77□□□□□ -0.21
NIF3L1-201ENST00000359683 NPHP3-ACAD11A0A0J9YXS1 232 aa13.76□□□□□ -0.21
NIF3L1-201ENST00000359683 TRAK2O60296 914 aa13.76□□□□□ -0.21
NIF3L1-201ENST00000359683 CASP1P29466 404 aa13.76□□□□□ -0.21
NIF3L1-201ENST00000359683 ARL2P36404 184 aa13.76□□□□□ -0.21
NIF3L1-201ENST00000359683 MAPK7Q13164 816 aa13.76□□□□□ -0.21
NIF3L1-201ENST00000359683 SNX17Q15036 470 aa13.76□□□□□ -0.21
NIF3L1-201ENST00000359683 POSTNQ15063 836 aa13.76□□□□□ -0.21
NIF3L1-201ENST00000359683 IER5Q5VY09 327 aa13.76□□□□□ -0.21
NIF3L1-201ENST00000359683 DYMQ7RTS9 669 aa13.76□□□□□ -0.21
NIF3L1-201ENST00000359683 NECAB2Q7Z6G3 386 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms