RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 ZNF720Q7Z2F6 126 aa18.85■□□□□ 0.61
TPM1-205ENST00000357980 TRIM50Q86XT4 487 aa18.85■□□□□ 0.61
TPM1-205ENST00000357980 NELFCDQ8IXH7 590 aa18.85■□□□□ 0.61
TPM1-205ENST00000357980 ZNF507Q8TCN5 953 aa18.85■□□□□ 0.61
TPM1-205ENST00000357980 STRA6Q9BX79 667 aa18.85■□□□□ 0.61
TPM1-205ENST00000357980 AZI2Q9H6S1 392 aa18.85■□□□□ 0.61
TPM1-205ENST00000357980 GPRC5CQ9NQ84 441 aa18.85■□□□□ 0.61
TPM1-205ENST00000357980 LARSQ9P2J5 1176 aaKnown RBP18.85■□□□□ 0.61
TPM1-205ENST00000357980 LIMA1Q9UHB6 759 aaKnown RBP18.85■□□□□ 0.61
TPM1-205ENST00000357980 A0A1B0GTH6 734 aa18.84■□□□□ 0.61
TPM1-205ENST00000357980 PPP1R37O75864 691 aa18.84■□□□□ 0.61
TPM1-205ENST00000357980 PLS3P13797 630 aa18.84■□□□□ 0.61
TPM1-205ENST00000357980 SMPD1P17405 629 aa18.84■□□□□ 0.61
TPM1-205ENST00000357980 NMT1P30419 496 aaKnown RBP18.84■□□□□ 0.61
TPM1-205ENST00000357980 LACTBP83111 547 aaPredicted RBP18.84■□□□□ 0.61
TPM1-205ENST00000357980 KRT31Q15323 416 aa18.84■□□□□ 0.61
TPM1-205ENST00000357980 KNOP1Q1ED39 458 aaKnown RBP18.84■□□□□ 0.61
TPM1-205ENST00000357980 CCDC144BQ3MJ40 725 aa18.84■□□□□ 0.61
TPM1-205ENST00000357980 LRRC55Q6ZSA7 311 aa18.84■□□□□ 0.61
TPM1-205ENST00000357980 SPC24Q8NBT2 197 aa18.84■□□□□ 0.61
TPM1-205ENST00000357980 PPTC7Q8NI37 304 aa18.84■□□□□ 0.61
TPM1-205ENST00000357980 XPNPEP1Q9NQW7 623 aa18.84■□□□□ 0.61
TPM1-205ENST00000357980 ZHX1Q9UKY1 873 aaPredicted RBP18.84■□□□□ 0.61
TPM1-205ENST00000357980 UBE4BO95155 1302 aa18.84■□□□□ 0.61
TPM1-205ENST00000357980 ADCY6O43306 1168 aa18.84■□□□□ 0.61
TPM1-205ENST00000357980 PRPF6O94906 941 aaKnown RBP18.84■□□□□ 0.61
TPM1-205ENST00000357980 MAPTP10636 758 aaKnown RBP18.84■□□□□ 0.61
TPM1-205ENST00000357980 CYP2B6P20813 491 aa18.84■□□□□ 0.61
TPM1-205ENST00000357980 TARBP2Q15633 366 aaKnown RBP18.84■□□□□ 0.61
TPM1-205ENST00000357980 MTERF2Q49AM1 385 aa18.84■□□□□ 0.61
TPM1-205ENST00000357980 IQSEC1Q6DN90 963 aa18.84■□□□□ 0.61
TPM1-205ENST00000357980 MCPH1Q8NEM0 835 aa18.84■□□□□ 0.61
TPM1-205ENST00000357980 EEF2KMTQ96G04 330 aa18.84■□□□□ 0.61
TPM1-205ENST00000357980 FAM167AQ96KS9 214 aa18.84■□□□□ 0.61
TPM1-205ENST00000357980 CTAGE1Q96RT6 745 aa18.84■□□□□ 0.61
TPM1-205ENST00000357980 TSG101Q99816 390 aa18.84■□□□□ 0.61
TPM1-205ENST00000357980 CFHR5Q9BXR6 569 aa18.84■□□□□ 0.61
TPM1-205ENST00000357980 ARHGAP39Q9C0H5 1083 aa18.84■□□□□ 0.61
TPM1-205ENST00000357980 THSD7BQ9C0I4 1608 aa18.83■□□□□ 0.61
TPM1-205ENST00000357980 ZMYM2Q9UBW7 1377 aa18.83■□□□□ 0.61
TPM1-205ENST00000357980 CASP8AP2Q9UKL3 1982 aa18.83■□□□□ 0.6
TPM1-205ENST00000357980 EEF1GP26641 437 aaKnown RBP18.83■□□□□ 0.6
TPM1-205ENST00000357980 FCGRTP55899 365 aa18.83■□□□□ 0.6
TPM1-205ENST00000357980 KCNA1Q09470 495 aa18.83■□□□□ 0.6
TPM1-205ENST00000357980 FAM102BQ5T8I3 360 aa18.83■□□□□ 0.6
TPM1-205ENST00000357980 PPP4R3CPQ6ZMV5 832 aa18.83■□□□□ 0.6
TPM1-205ENST00000357980 ZC3H3Q8IXZ2 948 aaKnown RBP18.83■□□□□ 0.6
TPM1-205ENST00000357980 GLG1Q92896 1179 aa18.83■□□□□ 0.6
TPM1-205ENST00000357980 DHX33Q9H6R0 707 aaKnown RBP18.83■□□□□ 0.6
TPM1-205ENST00000357980 ATP6V0A4Q9HBG4 840 aa18.83■□□□□ 0.6
TPM1-205ENST00000357980 NRBP2Q9NSY0 501 aa18.83■□□□□ 0.6
TPM1-205ENST00000357980 NKRFO15226 690 aaKnown RBP eCLIP18.82■□□□□ 0.61e-6■■□□□ 14
TPM1-205ENST00000357980 ZNF865P0CJ78 1059 aaPredicted RBP18.82■□□□□ 0.6
TPM1-205ENST00000357980 PSMC4P43686 418 aa18.82■□□□□ 0.6
TPM1-205ENST00000357980 SLC26A2P50443 739 aa18.82■□□□□ 0.6
TPM1-205ENST00000357980 NR1I3Q14994 352 aa18.82■□□□□ 0.6
TPM1-205ENST00000357980 EDRF1Q3B7T1 1238 aa18.82■□□□□ 0.6
TPM1-205ENST00000357980 ZC2HC1CQ53FD0 456 aaPredicted RBP18.82■□□□□ 0.6
TPM1-205ENST00000357980 HS1BP3Q53T59 392 aa18.82■□□□□ 0.6
TPM1-205ENST00000357980 ATP8B4Q8TF62 1192 aa18.82■□□□□ 0.6
TPM1-205ENST00000357980 KIFAP3Q92845 792 aa18.82■□□□□ 0.6
TPM1-205ENST00000357980 SMARCAD1Q9H4L7 1026 aa18.82■□□□□ 0.6
TPM1-205ENST00000357980 TRAF3IP3Q9Y228 551 aa18.82■□□□□ 0.6
TPM1-205ENST00000357980 HOXD8P13378 290 aaPredicted RBP18.81■□□□□ 0.6
TPM1-205ENST00000357980 CYP2C19P33261 490 aa18.81■□□□□ 0.6
TPM1-205ENST00000357980 SOX10P56693 466 aa18.81■□□□□ 0.6
TPM1-205ENST00000357980 RTP1P59025 263 aa18.81■□□□□ 0.6
TPM1-205ENST00000357980 FKBP3Q00688 224 aaKnown RBP18.81■□□□□ 0.6
TPM1-205ENST00000357980 EMC2Q15006 297 aa18.81■□□□□ 0.6
TPM1-205ENST00000357980 PRAMEF19Q5SWL8 479 aa18.81■□□□□ 0.6
TPM1-205ENST00000357980 FAM114A1Q8IWE2 563 aa18.81■□□□□ 0.6
TPM1-205ENST00000357980 DRC7Q8IY82 874 aa18.81■□□□□ 0.6
TPM1-205ENST00000357980 AFG1LQ8WV93 481 aa18.81■□□□□ 0.6
TPM1-205ENST00000357980 BBXQ8WY36 941 aaPredicted RBP18.81■□□□□ 0.6
TPM1-205ENST00000357980 ST6GALNAC4Q9H4F1 302 aa18.81■□□□□ 0.6
TPM1-205ENST00000357980 C17orf75Q9HAS0 396 aa18.81■□□□□ 0.6
TPM1-205ENST00000357980 ZBTB42B2RXF5 422 aa18.81■□□□□ 0.6
TPM1-205ENST00000357980 PDXKO00764 312 aa18.81■□□□□ 0.6
TPM1-205ENST00000357980 PTMAP06454 111 aaKnown RBP18.81■□□□□ 0.6
TPM1-205ENST00000357980 TPM3P06753 285 aa18.81■□□□□ 0.6
TPM1-205ENST00000357980 XRCC5P13010 732 aaKnown RBP18.81■□□□□ 0.6
TPM1-205ENST00000357980 POLGP54098 1239 aaPredicted RBP18.81■□□□□ 0.6
TPM1-205ENST00000357980 NCKAP1LP55160 1127 aa18.81■□□□□ 0.6
TPM1-205ENST00000357980 ALCAMQ13740 583 aa18.81■□□□□ 0.6
TPM1-205ENST00000357980 PLCB4Q15147 1175 aa18.81■□□□□ 0.6
TPM1-205ENST00000357980 STXBP4Q6ZWJ1 553 aa18.81■□□□□ 0.6
TPM1-205ENST00000357980 ANKRD20A12PQ8NF67 263 aa18.81■□□□□ 0.6
TPM1-205ENST00000357980 TRIM44Q96DX7 344 aaPredicted RBP18.81■□□□□ 0.6
TPM1-205ENST00000357980 CNOT6LQ96LI5 555 aaKnown RBP18.81■□□□□ 0.6
TPM1-205ENST00000357980 TYW1Q9NV66 732 aaKnown RBP18.81■□□□□ 0.6
TPM1-205ENST00000357980 NRBP1Q9UHY1 535 aa18.81■□□□□ 0.6
TPM1-205ENST00000357980 PPME1Q9Y570 386 aa18.81■□□□□ 0.6
TPM1-205ENST00000357980 PCDHB13Q9Y5F0 798 aa18.81■□□□□ 0.6
TPM1-205ENST00000357980 K7ENM7 598 aa18.8■□□□□ 0.6
TPM1-205ENST00000357980 TGFB1I1O43294 461 aa18.8■□□□□ 0.6
TPM1-205ENST00000357980 FGFR1OPO95684 399 aaKnown RBP18.8■□□□□ 0.6
TPM1-205ENST00000357980 TBC1D8O95759 1140 aa18.8■□□□□ 0.6
TPM1-205ENST00000357980 LGALS2P05162 132 aa18.8■□□□□ 0.6
TPM1-205ENST00000357980 MARK3P27448 753 aa18.8■□□□□ 0.6
TPM1-205ENST00000357980 MAP2K2P36507 400 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms