RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 CYP11B2P19099 503 aa16.54■□□□□ 0.24
CCNE1-202ENST00000357943 PTGISQ16647 500 aa16.54■□□□□ 0.24
CCNE1-202ENST00000357943 TRIM60Q495X7 471 aa16.54■□□□□ 0.24
CCNE1-202ENST00000357943 ARSHQ5FYA8 562 aa16.54■□□□□ 0.24
CCNE1-202ENST00000357943 C1orf186Q6ZWK4 172 aa16.54■□□□□ 0.24
CCNE1-202ENST00000357943 SV2BQ7L1I2 683 aa16.54■□□□□ 0.24
CCNE1-202ENST00000357943 MAEAQ7L5Y9 396 aa16.54■□□□□ 0.24
CCNE1-202ENST00000357943 FAM126BQ8IXS8 530 aa16.54■□□□□ 0.24
CCNE1-202ENST00000357943 LRRC71Q8N4P6 559 aa16.54■□□□□ 0.24
CCNE1-202ENST00000357943 SLC7A3Q8WY07 619 aa16.54■□□□□ 0.24
CCNE1-202ENST00000357943 XPNPEP1Q9NQW7 623 aa16.54■□□□□ 0.24
CCNE1-202ENST00000357943 PDLIM7Q9NR12 457 aa16.54■□□□□ 0.24
CCNE1-202ENST00000357943 KBTBD4Q9NVX7 518 aa16.54■□□□□ 0.24
CCNE1-202ENST00000357943 PPME1Q9Y570 386 aa16.54■□□□□ 0.24
CCNE1-202ENST00000357943 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.53■□□□□ 0.24
CCNE1-202ENST00000357943 IGKV6-21A0A0C4DH24 114 aa16.53■□□□□ 0.24
CCNE1-202ENST00000357943 RAD51AP2Q09MP3 1159 aa16.53■□□□□ 0.24
CCNE1-202ENST00000357943 DRP2Q13474 957 aa16.53■□□□□ 0.24
CCNE1-202ENST00000357943 EMC2Q15006 297 aa16.53■□□□□ 0.24
CCNE1-202ENST00000357943 EFCAB12Q6NXP0 572 aa16.53■□□□□ 0.24
CCNE1-202ENST00000357943 RUFY4Q6ZNE9 571 aa16.53■□□□□ 0.24
CCNE1-202ENST00000357943 GPBP1Q86WP2 473 aa16.53■□□□□ 0.24
CCNE1-202ENST00000357943 GRAMD1CQ8IYS0 662 aa16.53■□□□□ 0.24
CCNE1-202ENST00000357943 CEP57L1Q8IYX8 460 aa16.53■□□□□ 0.24
CCNE1-202ENST00000357943 METTL13Q8N6R0 699 aa16.53■□□□□ 0.24
CCNE1-202ENST00000357943 CNNM3Q8NE01 707 aa16.53■□□□□ 0.24
CCNE1-202ENST00000357943 GPT2Q8TD30 523 aa16.53■□□□□ 0.24
CCNE1-202ENST00000357943 SEZ6LQ9BYH1 1024 aa16.53■□□□□ 0.24
CCNE1-202ENST00000357943 SUGCTQ9HAC7 445 aa16.53■□□□□ 0.24
CCNE1-202ENST00000357943 POLD4Q9HCU8 107 aa16.53■□□□□ 0.24
CCNE1-202ENST00000357943 DACT1Q9NYF0 836 aa16.53■□□□□ 0.24
CCNE1-202ENST00000357943 NPHP3-ACAD11A0A0J9YXS1 232 aa16.52■□□□□ 0.24
CCNE1-202ENST00000357943 MAGEB2O15479 319 aa16.52■□□□□ 0.24
CCNE1-202ENST00000357943 RFC5P40937 340 aa16.52■□□□□ 0.24
CCNE1-202ENST00000357943 AFMP43652 599 aa16.52■□□□□ 0.24
CCNE1-202ENST00000357943 CLCN3P51790 818 aa16.52■□□□□ 0.24
CCNE1-202ENST00000357943 RTP1P59025 263 aa16.52■□□□□ 0.24
CCNE1-202ENST00000357943 CACNB1Q02641 598 aaPredicted RBP16.52■□□□□ 0.24
CCNE1-202ENST00000357943 MKRN4PQ13434 485 aaPredicted RBP16.52■□□□□ 0.24
CCNE1-202ENST00000357943 NFKBIBQ15653 356 aa16.52■□□□□ 0.24
CCNE1-202ENST00000357943 KRBA2Q6ZNG9 492 aa16.52■□□□□ 0.24
CCNE1-202ENST00000357943 ANKRD33Q7Z3H0 272 aa16.52■□□□□ 0.24
CCNE1-202ENST00000357943 WNT8BQ93098 351 aa16.52■□□□□ 0.24
CCNE1-202ENST00000357943 TNMDQ9H2S6 317 aa16.52■□□□□ 0.24
CCNE1-202ENST00000357943 ATP6V0A4Q9HBG4 840 aa16.52■□□□□ 0.24
CCNE1-202ENST00000357943 GPRC5CQ9NQ84 441 aa16.52■□□□□ 0.24
CCNE1-202ENST00000357943 USP25Q9UHP3 1055 aa16.52■□□□□ 0.24
CCNE1-202ENST00000357943 NOD1Q9Y239 953 aa16.52■□□□□ 0.24
CCNE1-202ENST00000357943 ATP11BQ9Y2G3 1177 aa16.52■□□□□ 0.24
CCNE1-202ENST00000357943 PCDHA2Q9Y5H9 948 aa16.52■□□□□ 0.24
CCNE1-202ENST00000357943 MROH7Q68CQ1 1323 aa16.52■□□□□ 0.24
CCNE1-202ENST00000357943 MYMKA6NI61 221 aa16.52■□□□□ 0.23
CCNE1-202ENST00000357943 CD4P01730 458 aa16.52■□□□□ 0.23
CCNE1-202ENST00000357943 CYP2C9P11712 490 aa16.52■□□□□ 0.23
CCNE1-202ENST00000357943 CASP1P29466 404 aa16.52■□□□□ 0.23
CCNE1-202ENST00000357943 TLE2Q04725 743 aa16.52■□□□□ 0.23
CCNE1-202ENST00000357943 DYMQ7RTS9 669 aa16.52■□□□□ 0.23
CCNE1-202ENST00000357943 SERINC5Q86VE9 423 aa16.52■□□□□ 0.23
CCNE1-202ENST00000357943 LINC01465Q8N7H1 131 aa16.52■□□□□ 0.23
CCNE1-202ENST00000357943 RETREG2Q8NC44 543 aa16.52■□□□□ 0.23
CCNE1-202ENST00000357943 TMEM143Q96AN5 459 aa16.52■□□□□ 0.23
CCNE1-202ENST00000357943 PAGE5Q96GU1 130 aa16.52■□□□□ 0.23
CCNE1-202ENST00000357943 SMIM35A0A1B0GVV1 85 aa16.51■□□□□ 0.23
CCNE1-202ENST00000357943 KIAA0319LQ8IZA0 1049 aa16.51■□□□□ 0.23
CCNE1-202ENST00000357943 DNAJB3Q8WWF6 145 aa16.51■□□□□ 0.23
CCNE1-202ENST00000357943 DHX38Q92620 1227 aaKnown RBP16.51■□□□□ 0.23
CCNE1-202ENST00000357943 DDX12PQ92771 950 aa16.51■□□□□ 0.23
CCNE1-202ENST00000357943 TOX2Q96NM4 488 aa16.51■□□□□ 0.23
CCNE1-202ENST00000357943 JPH2Q9BR39 696 aaPredicted RBP16.51■□□□□ 0.23
CCNE1-202ENST00000357943 FAM49AQ9H0Q0 323 aaPredicted RBP16.51■□□□□ 0.23
CCNE1-202ENST00000357943 MAGEF1Q9HAY2 307 aa16.51■□□□□ 0.23
CCNE1-202ENST00000357943 KCND2Q9NZV8 630 aa16.51■□□□□ 0.23
CCNE1-202ENST00000357943 ARID2Q68CP9 1835 aa16.51■□□□□ 0.23
CCNE1-202ENST00000357943 RSPH10B2B2RC85 870 aa16.5■□□□□ 0.23
CCNE1-202ENST00000357943 KINO60870 393 aaKnown RBP16.5■□□□□ 0.23
CCNE1-202ENST00000357943 RSPH10BP0C881 870 aa16.5■□□□□ 0.23
CCNE1-202ENST00000357943 GUCY2CP25092 1073 aa16.5■□□□□ 0.23
CCNE1-202ENST00000357943 TMOD1P28289 359 aa16.5■□□□□ 0.23
CCNE1-202ENST00000357943 FAAP100Q0VG06 881 aa16.5■□□□□ 0.23
CCNE1-202ENST00000357943 GIT2Q14161 759 aa16.5■□□□□ 0.23
CCNE1-202ENST00000357943 FAM102BQ5T8I3 360 aa16.5■□□□□ 0.23
CCNE1-202ENST00000357943 TAF2Q6P1X5 1199 aa16.5■□□□□ 0.23
CCNE1-202ENST00000357943 SH3RF1Q7Z6J0 888 aa16.5■□□□□ 0.23
CCNE1-202ENST00000357943 EXOC8Q8IYI6 725 aa16.5■□□□□ 0.23
CCNE1-202ENST00000357943 DAW1Q8N136 415 aa16.5■□□□□ 0.23
CCNE1-202ENST00000357943 MCPH1Q8NEM0 835 aa16.5■□□□□ 0.23
CCNE1-202ENST00000357943 DNAJC19Q96DA6 116 aa16.5■□□□□ 0.23
CCNE1-202ENST00000357943 TIGD1Q96MW7 591 aa16.5■□□□□ 0.23
CCNE1-202ENST00000357943 REEP2Q9BRK0 252 aa16.5■□□□□ 0.23
CCNE1-202ENST00000357943 TRIM9Q9C026 710 aa16.5■□□□□ 0.23
CCNE1-202ENST00000357943 BLZF1Q9H2G9 400 aa16.5■□□□□ 0.23
CCNE1-202ENST00000357943 KAT6AQ92794 2004 aa16.5■□□□□ 0.23
CCNE1-202ENST00000357943 TRIP12Q14669 1992 aaPredicted RBP16.5■□□□□ 0.23
CCNE1-202ENST00000357943 SFI1A8K8P3 1242 aa16.49■□□□□ 0.23
CCNE1-202ENST00000357943 DCDC2CA8MYV0 355 aa16.49■□□□□ 0.23
CCNE1-202ENST00000357943 GAS2O43903 313 aaKnown RBP16.49■□□□□ 0.23
CCNE1-202ENST00000357943 HIP1RO75146 1068 aa16.49■□□□□ 0.23
CCNE1-202ENST00000357943 KRT18P05783 430 aaKnown RBP16.49■□□□□ 0.23
CCNE1-202ENST00000357943 PRR29P0C7W0 189 aa16.49■□□□□ 0.23
CCNE1-202ENST00000357943 AMPD3Q01432 767 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms