RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 FAM102BQ5T8I3 360 aa9.79□□□□□ -0.84
COL4A3BP-202ENST00000357457 TYW1BQ6NUM6 668 aa9.79□□□□□ -0.84
COL4A3BP-202ENST00000357457 TMTC3Q6ZXV5 915 aa9.79□□□□□ -0.84
COL4A3BP-202ENST00000357457 SLC24A5Q71RS6 500 aa9.79□□□□□ -0.84
COL4A3BP-202ENST00000357457 SGMS1Q86VZ5 419 aa9.79□□□□□ -0.84
COL4A3BP-202ENST00000357457 FBXL6Q8N531 539 aa9.79□□□□□ -0.84
COL4A3BP-202ENST00000357457 VN1R2Q8NFZ6 395 aa9.79□□□□□ -0.84
COL4A3BP-202ENST00000357457 ASIC4Q96FT7 647 aa9.79□□□□□ -0.84
COL4A3BP-202ENST00000357457 SDF4Q9BRK5 362 aa9.79□□□□□ -0.84
COL4A3BP-202ENST00000357457 S1PR5Q9H228 398 aa9.79□□□□□ -0.84
COL4A3BP-202ENST00000357457 CWH43Q9H720 699 aa9.79□□□□□ -0.84
COL4A3BP-202ENST00000357457 AGO4Q9HCK5 861 aaKnown RBP9.79□□□□□ -0.84
COL4A3BP-202ENST00000357457 RIC8AQ9NPQ8 531 aa9.79□□□□□ -0.84
COL4A3BP-202ENST00000357457 TLR9Q9NR96 1032 aa9.79□□□□□ -0.84
COL4A3BP-202ENST00000357457 AAASQ9NRG9 546 aa9.79□□□□□ -0.84
COL4A3BP-202ENST00000357457 LRFN2Q9ULH4 789 aa9.79□□□□□ -0.84
COL4A3BP-202ENST00000357457 BARX2Q9UMQ3 279 aaPredicted RBP9.79□□□□□ -0.84
COL4A3BP-202ENST00000357457 ST3GAL5Q9UNP4 418 aa9.79□□□□□ -0.84
COL4A3BP-202ENST00000357457 LZTS1Q9Y250 596 aa9.79□□□□□ -0.84
COL4A3BP-202ENST00000357457 PCDHGC5Q9Y5F6 944 aa9.79□□□□□ -0.84
COL4A3BP-202ENST00000357457 SPTBN4Q9H254 2564 aa9.79□□□□□ -0.84
COL4A3BP-202ENST00000357457 FAM186AA6NE01 2351 aa9.79□□□□□ -0.84
COL4A3BP-202ENST00000357457 COL1A2P08123 1366 aa9.78□□□□□ -0.84
COL4A3BP-202ENST00000357457 ZBTB42B2RXF5 422 aa9.78□□□□□ -0.84
COL4A3BP-202ENST00000357457 PER2O15055 1255 aa9.78□□□□□ -0.84
COL4A3BP-202ENST00000357457 GPR182O15218 404 aa9.78□□□□□ -0.84
COL4A3BP-202ENST00000357457 PPFIA3O75145 1194 aa9.78□□□□□ -0.84
COL4A3BP-202ENST00000357457 RPS6KA5O75582 802 aa9.78□□□□□ -0.84
COL4A3BP-202ENST00000357457 FGF18O76093 207 aa9.78□□□□□ -0.84
COL4A3BP-202ENST00000357457 CCNE2O96020 404 aa9.78□□□□□ -0.84
COL4A3BP-202ENST00000357457 ATP4AP20648 1035 aa9.78□□□□□ -0.84
COL4A3BP-202ENST00000357457 PLCB3Q01970 1234 aa9.78□□□□□ -0.84
COL4A3BP-202ENST00000357457 FUT2Q10981 343 aa9.78□□□□□ -0.84
COL4A3BP-202ENST00000357457 DSC3Q14574 896 aa9.78□□□□□ -0.84
COL4A3BP-202ENST00000357457 ZNF484Q5JVG2 852 aa9.78□□□□□ -0.84
COL4A3BP-202ENST00000357457 ODR4Q5SWX8 454 aa9.78□□□□□ -0.84
COL4A3BP-202ENST00000357457 NFXL1Q6ZNB6 911 aa9.78□□□□□ -0.84
COL4A3BP-202ENST00000357457 NIPA1Q7RTP0 329 aa9.78□□□□□ -0.84
COL4A3BP-202ENST00000357457 CCDC82Q8N4S0 544 aa9.78□□□□□ -0.84
COL4A3BP-202ENST00000357457 MICAL1Q8TDZ2 1067 aa9.78□□□□□ -0.84
COL4A3BP-202ENST00000357457 TMEM40Q8WWA1 233 aa9.78□□□□□ -0.84
COL4A3BP-202ENST00000357457 RPGRIP1Q96KN7 1286 aa9.78□□□□□ -0.84
COL4A3BP-202ENST00000357457 ADAM2Q99965 735 aa9.78□□□□□ -0.84
COL4A3BP-202ENST00000357457 LSG1Q9H089 658 aaKnown RBP9.78□□□□□ -0.84
COL4A3BP-202ENST00000357457 ELAC1Q9H777 363 aaKnown RBP9.78□□□□□ -0.84
COL4A3BP-202ENST00000357457 TYW1Q9NV66 732 aaKnown RBP9.78□□□□□ -0.84
COL4A3BP-202ENST00000357457 SLC12A7Q9Y666 1083 aa9.78□□□□□ -0.84
COL4A3BP-202ENST00000357457 DCHS1Q96JQ0 3298 aa9.78□□□□□ -0.84
COL4A3BP-202ENST00000357457 DENND3A2RUS2 1198 aa9.77□□□□□ -0.85
COL4A3BP-202ENST00000357457 TBKBP1A7MCY6 615 aa9.77□□□□□ -0.85
COL4A3BP-202ENST00000357457 SLC27A2O14975 620 aa9.77□□□□□ -0.85
COL4A3BP-202ENST00000357457 DHX15O43143 795 aaKnown RBP9.77□□□□□ -0.85
COL4A3BP-202ENST00000357457 ST18O60284 1047 aa9.77□□□□□ -0.85
COL4A3BP-202ENST00000357457 GPR32O75388 356 aa9.77□□□□□ -0.85
COL4A3BP-202ENST00000357457 AVPR2P30518 371 aa9.77□□□□□ -0.85
COL4A3BP-202ENST00000357457 SREBF1P36956 1147 aa9.77□□□□□ -0.85
COL4A3BP-202ENST00000357457 CLK2P49760 499 aaKnown RBP9.77□□□□□ -0.85
COL4A3BP-202ENST00000357457 CRYBB1P53674 252 aaPredicted RBP9.77□□□□□ -0.85
COL4A3BP-202ENST00000357457 RBM10P98175 930 aaKnown RBP9.77□□□□□ -0.85
COL4A3BP-202ENST00000357457 NECTIN1Q15223 517 aa9.77□□□□□ -0.85
COL4A3BP-202ENST00000357457 WWC2Q6AWC2 1192 aa9.77□□□□□ -0.85
COL4A3BP-202ENST00000357457 SYCE2Q6PIF2 218 aa9.77□□□□□ -0.85
COL4A3BP-202ENST00000357457 HEATR3Q7Z4Q2 680 aa9.77□□□□□ -0.85
COL4A3BP-202ENST00000357457 SUGP1Q8IWZ8 645 aaKnown RBP9.77□□□□□ -0.85
COL4A3BP-202ENST00000357457 COLGALT1Q8NBJ5 622 aa9.77□□□□□ -0.85
COL4A3BP-202ENST00000357457 NEK1Q96PY6 1258 aa9.77□□□□□ -0.85
COL4A3BP-202ENST00000357457 IRF2BPLQ9H1B7 796 aa9.77□□□□□ -0.85
COL4A3BP-202ENST00000357457 NGRNQ9NPE2 291 aaKnown RBP9.77□□□□□ -0.85
COL4A3BP-202ENST00000357457 TMEM161AQ9NX61 479 aa9.77□□□□□ -0.85
COL4A3BP-202ENST00000357457 TMEM260Q9NX78 707 aa9.77□□□□□ -0.85
COL4A3BP-202ENST00000357457 hCG_1984214I3L0E3 225 aa9.76□□□□□ -0.85
COL4A3BP-202ENST00000357457 CYP3A4P08684 503 aa9.76□□□□□ -0.85
COL4A3BP-202ENST00000357457 HOXB8P17481 243 aaPredicted RBP9.76□□□□□ -0.85
COL4A3BP-202ENST00000357457 AP3B2Q13367 1082 aa9.76□□□□□ -0.85
COL4A3BP-202ENST00000357457 PTPN21Q16825 1174 aa9.76□□□□□ -0.85
COL4A3BP-202ENST00000357457 SPOUT1Q5T280 376 aaKnown RBP9.76□□□□□ -0.85
COL4A3BP-202ENST00000357457 FAM160B1Q5W0V3 765 aa9.76□□□□□ -0.85
COL4A3BP-202ENST00000357457 CREB3L3Q68CJ9 461 aa9.76□□□□□ -0.85
COL4A3BP-202ENST00000357457 ANKRD54Q6NXT1 300 aa9.76□□□□□ -0.85
COL4A3BP-202ENST00000357457 PPP1R18Q6NYC8 613 aa9.76□□□□□ -0.85
COL4A3BP-202ENST00000357457 LRRC55Q6ZSA7 311 aa9.76□□□□□ -0.85
COL4A3BP-202ENST00000357457 FAM228AQ86W67 206 aa9.76□□□□□ -0.85
COL4A3BP-202ENST00000357457 CCDC60Q8IWA6 550 aaPredicted RBP9.76□□□□□ -0.85
COL4A3BP-202ENST00000357457 THNSL1Q8IYQ7 743 aa9.76□□□□□ -0.85
COL4A3BP-202ENST00000357457 ZNF713Q8N859 430 aaPredicted RBP9.76□□□□□ -0.85
COL4A3BP-202ENST00000357457 CRYGNQ8WXF5 182 aa9.76□□□□□ -0.85
COL4A3BP-202ENST00000357457 MRPS27Q92552 414 aaKnown RBP9.76□□□□□ -0.85
COL4A3BP-202ENST00000357457 CASD1Q96PB1 797 aa9.76□□□□□ -0.85
COL4A3BP-202ENST00000357457 LRRC2Q9BYS8 371 aa9.76□□□□□ -0.85
COL4A3BP-202ENST00000357457 ANO3Q9BYT9 981 aa9.76□□□□□ -0.85
COL4A3BP-202ENST00000357457 TMEM117Q9H0C3 514 aa9.76□□□□□ -0.85
COL4A3BP-202ENST00000357457 GLT8D2Q9H1C3 349 aa9.76□□□□□ -0.85
COL4A3BP-202ENST00000357457 ATP6V0A4Q9HBG4 840 aa9.76□□□□□ -0.85
COL4A3BP-202ENST00000357457 ZNF302Q9NR11 478 aa9.76□□□□□ -0.85
COL4A3BP-202ENST00000357457 RNF19AQ9NV58 838 aa9.76□□□□□ -0.85
COL4A3BP-202ENST00000357457 RBM28Q9NW13 759 aaKnown RBP9.76□□□□□ -0.85
COL4A3BP-202ENST00000357457 HCSTQ9UBK5 93 aa9.76□□□□□ -0.85
COL4A3BP-202ENST00000357457 PUF60Q9UHX1 559 aaKnown RBP9.76□□□□□ -0.85
COL4A3BP-202ENST00000357457 GINS2Q9Y248 185 aa9.76□□□□□ -0.85
COL4A3BP-202ENST00000357457 MAFBQ9Y5Q3 323 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms