RNA–Protein interactions for RNA: ENST00000357325.9

HDGF-201, Transcript of heparin binding growth factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGF, Length 2,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-201ENST00000357325 COL20A1Q9P218 1284 aa27.27■■□□□ 1.96
HDGF-201ENST00000357325 SRCAPQ6ZRS2 3230 aa27.26■■□□□ 1.95
HDGF-201ENST00000357325 SHTN1A0MZ66 631 aa27.26■■□□□ 1.95
HDGF-201ENST00000357325 TISP43B9A030 160 aa27.26■■□□□ 1.95
HDGF-201ENST00000357325 KCNK3O14649 394 aa27.26■■□□□ 1.95
HDGF-201ENST00000357325 HEXIM1O94992 359 aaKnown RBP27.26■■□□□ 1.95
HDGF-201ENST00000357325 TAF3Q5VWG9 929 aa27.26■■□□□ 1.95
HDGF-201ENST00000357325 IFT81Q8WYA0 676 aa27.26■■□□□ 1.95
HDGF-201ENST00000357325 VCPKMTQ9H867 229 aa27.26■■□□□ 1.95
HDGF-201ENST00000357325 NENFQ9UMX5 172 aa27.26■■□□□ 1.95
HDGF-201ENST00000357325 STK24Q9Y6E0 443 aa27.26■■□□□ 1.95
HDGF-201ENST00000357325 LRRN2O75325 713 aa27.26■■□□□ 1.95
HDGF-201ENST00000357325 GAP43P17677 238 aa27.26■■□□□ 1.95
HDGF-201ENST00000357325 LRRC57Q8N9N7 239 aa27.26■■□□□ 1.95
HDGF-201ENST00000357325 IL31RAQ8NI17 732 aa27.26■■□□□ 1.95
HDGF-201ENST00000357325 LXNQ9BS40 222 aa27.26■■□□□ 1.95
HDGF-201ENST00000357325 ITGB5P18084 799 aa27.25■■□□□ 1.95
HDGF-201ENST00000357325 PRKCIP41743 596 aa27.25■■□□□ 1.95
HDGF-201ENST00000357325 MUM1L1Q5H9M0 696 aa27.25■■□□□ 1.95
HDGF-201ENST00000357325 ODR4Q5SWX8 454 aa27.25■■□□□ 1.95
HDGF-201ENST00000357325 KLHL7Q8IXQ5 586 aa27.25■■□□□ 1.95
HDGF-201ENST00000357325 DAW1Q8N136 415 aa27.25■■□□□ 1.95
HDGF-201ENST00000357325 LNX1Q8TBB1 728 aaPredicted RBP27.25■■□□□ 1.95
HDGF-201ENST00000357325 GMLQ99445 158 aa27.25■■□□□ 1.95
HDGF-201ENST00000357325 LRRC31Q6UY01 552 aa27.24■■□□□ 1.95
HDGF-201ENST00000357325 FAM178BQ8IXR5 827 aa27.24■■□□□ 1.95
HDGF-201ENST00000357325 LCMT1Q9UIC8 334 aa27.24■■□□□ 1.95
HDGF-201ENST00000357325 FRMPD4Q14CM0 1322 aa27.24■■□□□ 1.95
HDGF-201ENST00000357325 COL2A1P02458 1487 aaPredicted RBP27.24■■□□□ 1.95
HDGF-201ENST00000357325 TMCO5BA8MYB1 307 aa27.24■■□□□ 1.95
HDGF-201ENST00000357325 EIF3DO15371 548 aaKnown RBP eCLIP27.24■■□□□ 1.95
HDGF-201ENST00000357325 INPP5BP32019 993 aa27.24■■□□□ 1.95
HDGF-201ENST00000357325 PSMC2P35998 433 aaKnown RBP27.24■■□□□ 1.95
HDGF-201ENST00000357325 EPHB4P54760 987 aa27.24■■□□□ 1.95
HDGF-201ENST00000357325 GRIPAP1Q4V328 841 aa27.24■■□□□ 1.95
HDGF-201ENST00000357325 TRMT1LQ7Z2T5 733 aaKnown RBP27.24■■□□□ 1.95
HDGF-201ENST00000357325 U2AF1L4Q8WU68 220 aaKnown RBP27.24■■□□□ 1.95
HDGF-201ENST00000357325 AGPAT3Q9NRZ7 376 aa27.24■■□□□ 1.95
HDGF-201ENST00000357325 KIF13BQ9NQT8 1826 aa27.24■■□□□ 1.95
HDGF-201ENST00000357325 IPO5O00410 1097 aaKnown RBP27.23■■□□□ 1.95
HDGF-201ENST00000357325 EVI5O60447 810 aa27.23■■□□□ 1.95
HDGF-201ENST00000357325 SLC15A2Q16348 729 aa27.23■■□□□ 1.95
HDGF-201ENST00000357325 CASKIN2Q8WXE0 1202 aa27.23■■□□□ 1.95
HDGF-201ENST00000357325 GDF3Q9NR23 364 aa27.23■■□□□ 1.95
HDGF-201ENST00000357325 RAD51CO43502 376 aa27.23■■□□□ 1.95
HDGF-201ENST00000357325 KIF4AO95239 1232 aa27.23■■□□□ 1.95
HDGF-201ENST00000357325 FMO5P49326 533 aa27.23■■□□□ 1.95
HDGF-201ENST00000357325 MAPK7Q13164 816 aa27.23■■□□□ 1.95
HDGF-201ENST00000357325 B3GNT9Q6UX72 402 aa27.23■■□□□ 1.95
HDGF-201ENST00000357325 USP38Q8NB14 1042 aa27.23■■□□□ 1.95
HDGF-201ENST00000357325 ARL8AQ96BM9 186 aa27.23■■□□□ 1.95
HDGF-201ENST00000357325 WDR11Q9BZH6 1224 aa27.23■■□□□ 1.95
HDGF-201ENST00000357325 GPR88Q9GZN0 384 aa27.23■■□□□ 1.95
HDGF-201ENST00000357325 NFIBO00712 420 aa27.22■■□□□ 1.95
HDGF-201ENST00000357325 ZBTB48P10074 688 aaPredicted RBP27.22■■□□□ 1.95
HDGF-201ENST00000357325 GUCY2FP51841 1108 aa27.22■■□□□ 1.95
HDGF-201ENST00000357325 ZNF131P52739 623 aa27.22■■□□□ 1.95
HDGF-201ENST00000357325 RPS6KA1Q15418 735 aa27.22■■□□□ 1.95
HDGF-201ENST00000357325 SPDYE2Q495Y8 402 aa27.22■■□□□ 1.95
HDGF-201ENST00000357325 TPCN2Q8NHX9 752 aa27.22■■□□□ 1.95
HDGF-201ENST00000357325 CHURC1Q8WUH1 139 aa27.22■■□□□ 1.95
HDGF-201ENST00000357325 MRPL11Q9Y3B7 192 aaKnown RBP27.22■■□□□ 1.95
HDGF-201ENST00000357325 TMEM150BA6NC51 233 aa27.22■■□□□ 1.95
HDGF-201ENST00000357325 HIP1RO75146 1068 aa27.22■■□□□ 1.95
HDGF-201ENST00000357325 LEKR1Q6ZMV7 388 aa27.22■■□□□ 1.95
HDGF-201ENST00000357325 GLYCTKQ8IVS8 523 aa27.22■■□□□ 1.95
HDGF-201ENST00000357325 AP1M1Q9BXS5 423 aa27.22■■□□□ 1.95
HDGF-201ENST00000357325 OSGEPQ9NPF4 335 aa27.22■■□□□ 1.95
HDGF-201ENST00000357325 BZW2Q9Y6E2 419 aaKnown RBP27.22■■□□□ 1.95
HDGF-201ENST00000357325 BTNL10A8MVZ5 291 aa27.21■■□□□ 1.95
HDGF-201ENST00000357325 TBC1D10BQ4KMP7 808 aaPredicted RBP27.21■■□□□ 1.95
HDGF-201ENST00000357325 ZSWIM2Q8NEG5 633 aa27.21■■□□□ 1.95
HDGF-201ENST00000357325 NACC1Q96RE7 527 aa27.21■■□□□ 1.95
HDGF-201ENST00000357325 RNF14Q9UBS8 474 aa27.21■■□□□ 1.95
HDGF-201ENST00000357325 DNAJC12Q9UKB3 198 aa27.21■■□□□ 1.95
HDGF-201ENST00000357325 SYNPO2Q9UMS6 1093 aa27.21■■□□□ 1.95
HDGF-201ENST00000357325 ZNF536O15090 1300 aa27.21■■□□□ 1.95
HDGF-201ENST00000357325 F8VZ95 297 aa27.21■■□□□ 1.95
HDGF-201ENST00000357325 DLG4P78352 724 aa27.21■■□□□ 1.95
HDGF-201ENST00000357325 DRAP1Q14919 205 aaPredicted RBP27.21■■□□□ 1.95
HDGF-201ENST00000357325 SKIDA1Q1XH10 827 aa27.21■■□□□ 1.95
HDGF-201ENST00000357325 LARGE2Q8N3Y3 721 aa27.21■■□□□ 1.95
HDGF-201ENST00000357325 FBXL5Q9UKA1 691 aa27.21■■□□□ 1.95
HDGF-201ENST00000357325 CEP104O60308 925 aa27.2■■□□□ 1.95
HDGF-201ENST00000357325 HMGB2P26583 209 aaKnown RBP27.2■■□□□ 1.95
HDGF-201ENST00000357325 CAP2P40123 477 aa27.2■■□□□ 1.95
HDGF-201ENST00000357325 PALB2Q86YC2 1186 aa27.2■■□□□ 1.95
HDGF-201ENST00000357325 METTL13Q8N6R0 699 aa27.2■■□□□ 1.95
HDGF-201ENST00000357325 ZIM3Q96PE6 472 aa27.2■■□□□ 1.95
HDGF-201ENST00000357325 PCIF1Q9H4Z3 704 aa27.2■■□□□ 1.95
HDGF-201ENST00000357325 DMAC2Q9NW81 257 aa27.2■■□□□ 1.95
HDGF-201ENST00000357325 IGSF9BQ9UPX0 1349 aa27.2■■□□□ 1.94
HDGF-201ENST00000357325 GOLGA6CA6NDK9 693 aa27.2■■□□□ 1.94
HDGF-201ENST00000357325 FLOT1O75955 427 aa27.2■■□□□ 1.94
HDGF-201ENST00000357325 GOLGA6DP0CG33 693 aa27.2■■□□□ 1.94
HDGF-201ENST00000357325 GLE1Q53GS7 698 aaKnown RBP27.2■■□□□ 1.94
HDGF-201ENST00000357325 TTMPQ5BVD1 217 aa27.2■■□□□ 1.94
HDGF-201ENST00000357325 EMBQ6PCB8 327 aa27.2■■□□□ 1.94
HDGF-201ENST00000357325 CAVIN3Q969G5 261 aa27.2■■□□□ 1.94
HDGF-201ENST00000357325 HOOK2Q96ED9 719 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms