RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 RNF180Q86T96 592 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 KIAA0319LQ8IZA0 1049 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 LINC01465Q8N7H1 131 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 SYT2Q8N9I0 419 aaPredicted RBP4.49□□□□□ -1.69
LIG4-201ENST00000356922 SLC43A3Q8NBI5 491 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 TMEM40Q8WWA1 233 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 VTI1AQ96AJ9 217 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 CEP170P1Q96L14 293 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 FIZ1Q96SL8 496 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 SUGCTQ9HAC7 445 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 TUFT1Q9NNX1 390 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 PHF24Q9UPV7 400 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 ADGRA3Q8IWK6 1321 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 IGKV6-21A0A0C4DH24 114 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 KLRC4O43908 158 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 USO1O60763 962 aaKnown RBP4.49□□□□□ -1.69
LIG4-201ENST00000356922 VTNP04004 478 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 SLFN14P0C7P3 912 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 TCTN1Q2MV58 587 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 XKR9Q5GH70 373 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 XKR3Q5GH77 459 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 PADI6Q6TGC4 694 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 SLC39A5Q6ZMH5 540 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 KRBA2Q6ZNG9 492 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 RASSF8Q8NHQ8 419 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 DDX12PQ92771 950 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 REEP2Q9BRK0 252 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 DHX33Q9H6R0 707 aaKnown RBP4.49□□□□□ -1.69
LIG4-201ENST00000356922 AZI2Q9H6S1 392 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 MINDY3Q9H8M7 445 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 TRPC6Q9Y210 931 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 MBLAC1A4D2B0 266 aaPredicted RBP4.49□□□□□ -1.69
LIG4-201ENST00000356922 MSCO60682 206 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 FAM160A1Q05DH4 1040 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 FAAP100Q0VG06 881 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 MBTPS1Q14703 1052 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 TRIM60Q495X7 471 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 FAM47CQ5HY64 1035 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 TRAF7Q6Q0C0 670 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 MTHFD1LQ6UB35 978 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 SMYD4Q8IYR2 804 aaPredicted RBP4.49□□□□□ -1.69
LIG4-201ENST00000356922 ASAP3Q8TDY4 903 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 DNAJB3Q8WWF6 145 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 LARP4BQ92615 738 aaKnown RBP4.49□□□□□ -1.69
LIG4-201ENST00000356922 NACC1Q96RE7 527 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 MTG1Q9BT17 334 aaPredicted RBP4.49□□□□□ -1.69
LIG4-201ENST00000356922 TRIM9Q9C026 710 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 STARD7Q9NQZ5 370 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 TBC1D7Q9P0N9 293 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 GTF2IRD1Q9UHL9 959 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 DNM3Q9UQ16 869 aa4.49□□□□□ -1.69
LIG4-201ENST00000356922 TULP1O00294 542 aaPredicted RBP4.48□□□□□ -1.69
LIG4-201ENST00000356922 PQBP1O60828 265 aaKnown RBP4.48□□□□□ -1.69
LIG4-201ENST00000356922 EYA4O95677 639 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 FGFR4P22455 802 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 HOXD13P35453 343 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 STAT6P42226 847 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 TLE2Q04725 743 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 PPFIA1Q13136 1202 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 EFCAB12Q6NXP0 572 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 FAM126BQ8IXS8 530 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 ARRDC4Q8NCT1 418 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 RDM1Q8NG50 284 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 PRPF31Q8WWY3 499 aaKnown RBP4.48□□□□□ -1.69
LIG4-201ENST00000356922 BBXQ8WY36 941 aaPredicted RBP4.48□□□□□ -1.69
LIG4-201ENST00000356922 GBP4Q96PP9 640 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 MED15Q96RN5 788 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 PCDHA5Q9Y5H7 936 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 PCDHA2Q9Y5H9 948 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 KAT6AQ92794 2004 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 TRIM43BA6NCK2 446 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 GOLGA6L4A6NEF3 574 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 TISP43B9A030 160 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 ARVCFO00192 962 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 BIN1O00499 593 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 MAFO75444 373 aaPredicted RBP4.48□□□□□ -1.69
LIG4-201ENST00000356922 CD4P01730 458 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 CHRNA1P02708 482 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 DPYDQ12882 1025 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 STK4Q13043 487 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 TRIM71Q2Q1W2 868 aaKnown RBP4.48□□□□□ -1.69
LIG4-201ENST00000356922 ZC2HC1CQ53FD0 456 aaPredicted RBP4.48□□□□□ -1.69
LIG4-201ENST00000356922 NFRKBQ6P4R8 1299 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 TAS1R3Q7RTX0 852 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 GPBP1Q86WP2 473 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 METTL13Q8N6R0 699 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 C7orf31Q8N865 590 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 IQUBQ8NA54 791 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 PCSK9Q8NBP7 692 aaKnown RBP4.48□□□□□ -1.69
LIG4-201ENST00000356922 ATP6V0A1Q93050 837 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 TRIM43Q96BQ3 446 aaPredicted RBP4.48□□□□□ -1.69
LIG4-201ENST00000356922 GLT1D1Q96MS3 346 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 FAM49AQ9H0Q0 323 aaPredicted RBP4.48□□□□□ -1.69
LIG4-201ENST00000356922 IFT122Q9HBG6 1241 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 MAPK8IP1Q9UQF2 711 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 ALPK3Q96L96 1907 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 MOXD2PA6NHM9 499 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 HBP1O60381 514 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 HIP1RO75146 1068 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 GLRA2P23416 452 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms