RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 GPATCH8Q9UKJ3 1502 aaKnown RBP12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 POTEB3A0JP26 581 aa12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 POTEBQ6S5H4 581 aa12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 RHOT2Q8IXI1 618 aa12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 PYROXD1Q8WU10 500 aa12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 CCNA1P78396 465 aa12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 FASTKD5Q7L8L6 764 aaKnown RBP12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 MAP4K1Q92918 833 aa12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 NACC1Q96RE7 527 aa12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 GTSE1Q9NYZ3 720 aa12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 SUN2Q9UH99 717 aa12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 TRIM33Q9UPN9 1127 aa12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 CA4P22748 312 aa12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 FAM26FQ5R3K3 315 aa12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 PPP4R3CPQ6ZMV5 832 aa12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 FAF2Q96CS3 445 aa12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 EDC3Q96F86 508 aaKnown RBP12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 DYDC2Q96IM9 177 aa12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 DDAH1O94760 285 aa12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 AP1B1Q10567 949 aa12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 PTPN21Q16825 1174 aa12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 DSTYKQ6XUX3 929 aa12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 CEP170P1Q96L14 293 aa12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 SYNDIG1Q9H7V2 258 aa12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 NHEJ1Q9H9Q4 299 aaPredicted RBP12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 RPF1Q9H9Y2 349 aaKnown RBP12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 CHCHD3Q9NX63 227 aaKnown RBP12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 ERBB4Q15303 1308 aa12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 KRT37O76014 449 aa12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 NFKBIAP25963 317 aa12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 ELMSAN1Q6PJG2 1045 aa12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 WDR17Q8IZU2 1322 aa12.28□□□□□ -0.44
SPTBN1-202ENST00000356805 ACSL3O95573 720 aa12.28□□□□□ -0.44
SPTBN1-202ENST00000356805 ZBED1O96006 694 aa12.28□□□□□ -0.44
SPTBN1-202ENST00000356805 PSMD2Q13200 908 aa12.28□□□□□ -0.44
SPTBN1-202ENST00000356805 LRRC41Q15345 812 aa12.28□□□□□ -0.44
SPTBN1-202ENST00000356805 TRIM60Q495X7 471 aa12.28□□□□□ -0.44
SPTBN1-202ENST00000356805 TJAP1Q5JTD0 557 aa12.28□□□□□ -0.44
SPTBN1-202ENST00000356805 CATSPER3Q86XQ3 398 aa12.28□□□□□ -0.44
SPTBN1-202ENST00000356805 MRPL47Q9HD33 250 aaKnown RBP12.28□□□□□ -0.44
SPTBN1-202ENST00000356805 GINM1Q9NU53 330 aa12.28□□□□□ -0.44
SPTBN1-202ENST00000356805 LINC00301Q8NCQ3 95 aa12.28□□□□□ -0.44
SPTBN1-202ENST00000356805 P2RX5Q93086 422 aa12.28□□□□□ -0.44
SPTBN1-202ENST00000356805 AFF4Q9UHB7 1163 aaKnown RBP12.28□□□□□ -0.44
SPTBN1-202ENST00000356805 CCDC195A0A1B0GUA6 201 aa12.28□□□□□ -0.44
SPTBN1-202ENST00000356805 ELAC2Q9BQ52 826 aaKnown RBP12.28□□□□□ -0.44
SPTBN1-202ENST00000356805 SYCP2Q9BX26 1530 aa12.28□□□□□ -0.44
SPTBN1-202ENST00000356805 E5RI56 91 aa12.28□□□□□ -0.44
SPTBN1-202ENST00000356805 DEAF1O75398 565 aaPredicted RBP12.28□□□□□ -0.44
SPTBN1-202ENST00000356805 RECQLP46063 649 aaPredicted RBP12.28□□□□□ -0.44
SPTBN1-202ENST00000356805 LRRC63Q05C16 580 aa12.28□□□□□ -0.44
SPTBN1-202ENST00000356805 LBRQ14739 615 aaKnown RBP12.28□□□□□ -0.44
SPTBN1-202ENST00000356805 MTERF2Q49AM1 385 aa12.28□□□□□ -0.44
SPTBN1-202ENST00000356805 TAF1BQ53T94 588 aaPredicted RBP12.28□□□□□ -0.44
SPTBN1-202ENST00000356805 YIPF2Q9BWQ6 316 aa12.28□□□□□ -0.44
SPTBN1-202ENST00000356805 FTOQ9C0B1 505 aaKnown RBP eCLIP12.28□□□□□ -0.444e-7■■■□□ 18.2
SPTBN1-202ENST00000356805 KLC2Q9H0B6 622 aa12.28□□□□□ -0.44
SPTBN1-202ENST00000356805 WBP4O75554 376 aaKnown RBP12.28□□□□□ -0.44
SPTBN1-202ENST00000356805 SERPINB2P05120 415 aa12.28□□□□□ -0.44
SPTBN1-202ENST00000356805 CENPUQ71F23 418 aa12.28□□□□□ -0.44
SPTBN1-202ENST00000356805 FANCBQ8NB91 859 aa12.28□□□□□ -0.44
SPTBN1-202ENST00000356805 ZNF212Q9UDV6 495 aa12.28□□□□□ -0.44
SPTBN1-202ENST00000356805 ZNF263O14978 683 aa12.28□□□□□ -0.44
SPTBN1-202ENST00000356805 CTIFO43310 598 aaKnown RBP12.28□□□□□ -0.44
SPTBN1-202ENST00000356805 CORO7P57737 925 aa12.28□□□□□ -0.44
SPTBN1-202ENST00000356805 CDC37Q16543 378 aaPredicted RBP12.28□□□□□ -0.44
SPTBN1-202ENST00000356805 DCAF4L1Q3SXM0 396 aa12.28□□□□□ -0.44
SPTBN1-202ENST00000356805 KIF21AQ7Z4S6 1674 aa12.28□□□□□ -0.44
SPTBN1-202ENST00000356805 RNF26Q9BY78 433 aaPredicted RBP12.28□□□□□ -0.44
SPTBN1-202ENST00000356805 LGR6Q9HBX8 967 aa12.28□□□□□ -0.44
SPTBN1-202ENST00000356805 FTCDO95954 541 aa12.27□□□□□ -0.44
SPTBN1-202ENST00000356805 MYL3P08590 195 aa12.27□□□□□ -0.44
SPTBN1-202ENST00000356805 PSMA2P25787 234 aa12.27□□□□□ -0.44
SPTBN1-202ENST00000356805 STAT2P52630 851 aa12.27□□□□□ -0.44
SPTBN1-202ENST00000356805 RPS8P62241 208 aaKnown RBP12.27□□□□□ -0.44
SPTBN1-202ENST00000356805 LRRC8BQ6P9F7 803 aa12.27□□□□□ -0.44
SPTBN1-202ENST00000356805 AGGF1Q8N302 714 aaeCLIP12.27□□□□□ -0.441e-11■■□□□ 11.7
SPTBN1-202ENST00000356805 ZNF513Q8N8E2 541 aaPredicted RBP12.27□□□□□ -0.44
SPTBN1-202ENST00000356805 AP1M1Q9BXS5 423 aa12.27□□□□□ -0.44
SPTBN1-202ENST00000356805 ZFP69BQ9UJL9 534 aa12.27□□□□□ -0.44
SPTBN1-202ENST00000356805 NFU1Q9UMS0 254 aa12.27□□□□□ -0.44
SPTBN1-202ENST00000356805 TNKSO95271 1327 aa12.27□□□□□ -0.44
SPTBN1-202ENST00000356805 SKOR1P84550 965 aa12.27□□□□□ -0.44
SPTBN1-202ENST00000356805 PDIK1LQ8N165 341 aa12.27□□□□□ -0.44
SPTBN1-202ENST00000356805 SLC26A7Q8TE54 656 aa12.27□□□□□ -0.44
SPTBN1-202ENST00000356805 LARP4BQ92615 738 aaKnown RBP12.27□□□□□ -0.44
SPTBN1-202ENST00000356805 FBXL5Q9UKA1 691 aa12.27□□□□□ -0.44
SPTBN1-202ENST00000356805 PPP1R37O75864 691 aa12.27□□□□□ -0.44
SPTBN1-202ENST00000356805 PSMC1P62191 440 aaKnown RBP12.27□□□□□ -0.44
SPTBN1-202ENST00000356805 UBE3AQ05086 875 aa12.27□□□□□ -0.44
SPTBN1-202ENST00000356805 AFG1LQ8WV93 481 aa12.27□□□□□ -0.44
SPTBN1-202ENST00000356805 ADD3Q9UEY8 706 aaKnown RBP12.27□□□□□ -0.44
SPTBN1-202ENST00000356805 USP19O94966 1318 aa12.27□□□□□ -0.45
SPTBN1-202ENST00000356805 EIF3HO15372 352 aaKnown RBP eCLIP12.27□□□□□ -0.453e-8■□□□□ 11.1
SPTBN1-202ENST00000356805 TTLL11Q8NHH1 800 aa12.27□□□□□ -0.45
SPTBN1-202ENST00000356805 LSG1Q9H089 658 aaKnown RBP12.27□□□□□ -0.45
SPTBN1-202ENST00000356805 PPCSQ9HAB8 311 aa12.27□□□□□ -0.45
SPTBN1-202ENST00000356805 PDP2Q9P2J9 529 aa12.27□□□□□ -0.45
SPTBN1-202ENST00000356805 STX18Q9P2W9 335 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms