RNA–Protein interactions for RNA: ENST00000355485.6

VANGL1-202, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 8,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-202ENST00000355485 NDST4Q9H3R1 872 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 PZPP20742 1482 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 SCG2P13521 617 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 GFAPP14136 432 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 DRP2Q13474 957 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 SYCP2LQ5T4T6 812 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 RAB44Q7Z6P3 723 aaPredicted RBP8.41□□□□□ -1.06
VANGL1-202ENST00000355485 HOMEZQ8IX15 550 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 SPATA4Q8NEY3 305 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 CUEDC2Q9H467 287 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 SLITRK6Q9H5Y7 841 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 PIDD1Q9HB75 910 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 RGL1Q9NZL6 768 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 FARP1Q9Y4F1 1045 aaPredicted RBP8.41□□□□□ -1.06
VANGL1-202ENST00000355485 ZNF521Q96K83 1311 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 TTC26A0AVF1 554 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 ZNF189O75820 626 aaPredicted RBP8.41□□□□□ -1.06
VANGL1-202ENST00000355485 SSTR3P32745 418 aaPredicted RBP8.41□□□□□ -1.06
VANGL1-202ENST00000355485 LMNB2Q03252 620 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 GLE1Q53GS7 698 aaKnown RBP8.41□□□□□ -1.06
VANGL1-202ENST00000355485 KIAA0825Q8IV33 1275 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 ZCRB1Q8TBF4 217 aaKnown RBP8.41□□□□□ -1.06
VANGL1-202ENST00000355485 OXER1Q8TDS5 423 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 DHTKD1Q96HY7 919 aaPredicted RBP8.41□□□□□ -1.06
VANGL1-202ENST00000355485 OSBPL3Q9H4L5 887 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 KDM5BQ9UGL1 1544 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 ADCY3O60266 1144 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 CARSP49589 748 aaKnown RBP8.41□□□□□ -1.06
VANGL1-202ENST00000355485 GRIN1Q05586 938 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 HADHQ16836 314 aaKnown RBP8.41□□□□□ -1.06
VANGL1-202ENST00000355485 NYAP1Q6ZVC0 841 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 ZFYVE1Q9HBF4 777 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 DDX25Q9UHL0 483 aaKnown RBP8.41□□□□□ -1.06
VANGL1-202ENST00000355485 CD109Q6YHK3 1445 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 ATP5HO75947 161 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 CPP00450 1065 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 NR2F2P24468 414 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 TARSP26639 723 aaKnown RBP8.41□□□□□ -1.06
VANGL1-202ENST00000355485 FAM43BQ6ZT52 329 aaPredicted RBP8.41□□□□□ -1.06
VANGL1-202ENST00000355485 PAWRQ96IZ0 340 aaKnown RBP8.41□□□□□ -1.06
VANGL1-202ENST00000355485 ZWILCHQ9H900 591 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 CDHR2Q9BYE9 1310 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 TMCC1O94876 653 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 SOX11P35716 441 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 NEK2P51955 445 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 MDM2Q00987 491 aaPredicted RBP8.41□□□□□ -1.06
VANGL1-202ENST00000355485 TRPM8Q7Z2W7 1104 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 HEATR4Q86WZ0 1026 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 LRRC34Q8IZ02 419 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 PI4K2BQ8TCG2 481 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 EHD4Q9H223 541 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 SELENONQ9NZV5 590 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 SUCLA2Q9P2R7 463 aaPredicted RBP8.41□□□□□ -1.06
VANGL1-202ENST00000355485 KIAA1024Q9UPX6 916 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 KIAA0232Q92628 1395 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 ZNF233A6NK53 670 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 ATP6V1B1P15313 513 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 MLH1P40692 756 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 RECQLP46063 649 aaPredicted RBP8.41□□□□□ -1.06
VANGL1-202ENST00000355485 KLK7P49862 253 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 PUM3Q15397 648 aaKnown RBP8.41□□□□□ -1.06
VANGL1-202ENST00000355485 DARS2Q6PI48 645 aaKnown RBP8.41□□□□□ -1.06
VANGL1-202ENST00000355485 CRLF3Q8IUI8 442 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 ANKMY2Q8IV38 441 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 EXOC8Q8IYI6 725 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 RNF14Q9UBS8 474 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 COL4A3BPQ9Y5P4 624 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 NUP153P49790 1475 aaKnown RBP8.41□□□□□ -1.06
VANGL1-202ENST00000355485 MAGI2Q86UL8 1455 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 TPD52L2O43399 206 aaKnown RBP8.4□□□□□ -1.06
VANGL1-202ENST00000355485 ZNF18P17022 549 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 MFSD4BQ5TF39 518 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 REXO1L1PQ8IX06 675 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 LARGE2Q8N3Y3 721 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 PYROXD1Q8WU10 500 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 THAP11Q96EK4 314 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 UBAP1Q9NZ09 502 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 ABCC1P33527 1531 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 CCT8L1PA6NM43 557 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 SFI1A8K8P3 1242 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 TEX28O15482 410 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 HSPA9P38646 679 aaKnown RBP8.4□□□□□ -1.06
VANGL1-202ENST00000355485 UBXN2AP68543 259 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 ANO4Q32M45 955 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 BTNL9Q6UXG8 535 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 CLEC17AQ6ZS10 378 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 CATSPER3Q86XQ3 398 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 WDR75Q8IWA0 830 aaKnown RBP8.4□□□□□ -1.06
VANGL1-202ENST00000355485 PLBD2Q8NHP8 589 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 CABLES1Q8TDN4 633 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 BPIFA3Q9BQP9 254 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 OLFML3Q9NRN5 406 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 PLXNC1O60486 1568 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 MED23Q9ULK4 1368 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 PLCH2O75038 1416 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 PDE5AO76074 875 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 CFBP00751 764 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 ACTN1P12814 892 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 H2AFXP16104 143 aaPredicted RBP8.4□□□□□ -1.06
VANGL1-202ENST00000355485 ANXA13P27216 316 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms