RNA–Protein interactions for RNA: ENST00000354268.8

SMARCAD1-201, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-201ENST00000354268 RAD54L2Q9Y4B4 1467 aa2.51□□□□□ -2.01
SMARCAD1-201ENST00000354268 DHX29Q7Z478 1369 aaKnown RBP2.51□□□□□ -2.01
SMARCAD1-201ENST00000354268 PALLDQ8WX93 1383 aa2.51□□□□□ -2.01
SMARCAD1-201ENST00000354268 TCRBV5S4A2TA0A5A2 114 aa2.51□□□□□ -2.01
SMARCAD1-201ENST00000354268 F8VZ95 297 aa2.51□□□□□ -2.01
SMARCAD1-201ENST00000354268 LAD1O00515 517 aa2.51□□□□□ -2.01
SMARCAD1-201ENST00000354268 CTNND1O60716 968 aaKnown RBP2.51□□□□□ -2.01
SMARCAD1-201ENST00000354268 SLITRK5O94991 958 aa2.51□□□□□ -2.01
SMARCAD1-201ENST00000354268 GLI1P08151 1106 aa2.51□□□□□ -2.01
SMARCAD1-201ENST00000354268 GNSP15586 552 aa2.51□□□□□ -2.01
SMARCAD1-201ENST00000354268 ELAVL4P26378 380 aaKnown RBP2.51□□□□□ -2.01
SMARCAD1-201ENST00000354268 SMAD3P84022 425 aaKnown RBP2.51□□□□□ -2.01
SMARCAD1-201ENST00000354268 PPARDQ03181 441 aa2.51□□□□□ -2.01
SMARCAD1-201ENST00000354268 LMAN2Q12907 356 aa2.51□□□□□ -2.01
SMARCAD1-201ENST00000354268 LAPTM5Q13571 262 aa2.51□□□□□ -2.01
SMARCAD1-201ENST00000354268 C16orf72Q14CZ0 275 aa2.51□□□□□ -2.01
SMARCAD1-201ENST00000354268 SMAD2Q15796 467 aaKnown RBP2.51□□□□□ -2.01
SMARCAD1-201ENST00000354268 SKOR2Q2VWA4 1001 aaPredicted RBP2.51□□□□□ -2.01
SMARCAD1-201ENST00000354268 FNBP1LQ5T0N5 605 aa2.51□□□□□ -2.01
SMARCAD1-201ENST00000354268 C6orf163Q5TEZ5 329 aa2.51□□□□□ -2.01
SMARCAD1-201ENST00000354268 ANGEL2Q5VTE6 544 aaKnown RBP2.51□□□□□ -2.01
SMARCAD1-201ENST00000354268 UGT2A3Q6UWM9 527 aa2.51□□□□□ -2.01
SMARCAD1-201ENST00000354268 VSTM1Q6UX27 236 aa2.51□□□□□ -2.01
SMARCAD1-201ENST00000354268 TTC30AQ86WT1 665 aa2.51□□□□□ -2.01
SMARCAD1-201ENST00000354268 TREML1Q86YW5 311 aa2.51□□□□□ -2.01
SMARCAD1-201ENST00000354268 PIGBQ92521 554 aa2.51□□□□□ -2.01
SMARCAD1-201ENST00000354268 MSLNLQ96KJ4 702 aa2.51□□□□□ -2.01
SMARCAD1-201ENST00000354268 C22orf23Q9BZE7 217 aa2.51□□□□□ -2.01
SMARCAD1-201ENST00000354268 SEPSECSQ9HD40 501 aaKnown RBP2.51□□□□□ -2.01
SMARCAD1-201ENST00000354268 PTTG2Q9NZH5 202 aa2.51□□□□□ -2.01
SMARCAD1-201ENST00000354268 VTI1BQ9UEU0 232 aa2.51□□□□□ -2.01
SMARCAD1-201ENST00000354268 RPS6KA6Q9UK32 745 aa2.51□□□□□ -2.01
SMARCAD1-201ENST00000354268 GLI2P10070 1586 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 MAPKBP1O60336 1514 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 PLEKHG1Q9ULL1 1385 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 MAST3O60307 1309 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 MEIS2O14770 477 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 CPNE3O75131 537 aaKnown RBP2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 VPS4BO75351 444 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 STAT1P42224 750 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 DUSP3P51452 185 aaPredicted RBP2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 AP2B1P63010 937 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 CREMQ03060 361 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 MTA1Q13330 715 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 CCDC6Q16204 474 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 ZNF484Q5JVG2 852 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 JAKMIP3Q5VZ66 844 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 VSIG10LQ86VR7 867 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 GALNT4Q8N4A0 578 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 TTLL6Q8N841 843 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 KCTD13Q8WZ19 329 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 MIEF2Q96C03 454 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 DHX58Q96C10 678 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 EID2BQ96D98 161 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 FAM193BQ96PV7 902 aaPredicted RBP2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 CLSTN3Q9BQT9 956 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 DDX23Q9BUQ8 820 aaKnown RBP2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 SGPP1Q9BX95 441 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 SIL1Q9H173 461 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 PCDH18Q9HCL0 1135 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 SPHK2Q9NRA0 654 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 ATP8A2Q9NTI2 1148 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 WSB2Q9NYS7 404 aaPredicted RBP2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 NXF1Q9UBU9 619 aaKnown RBP2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 ZNF70Q9UC06 446 aaPredicted RBP2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 ISY1Q9ULR0 285 aaKnown RBP2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 VPS4AQ9UN37 437 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 ABCC3O15438 1527 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 NLRP1Q9C000 1473 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 PRG4Q92954 1404 aaPredicted RBP2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 MYPNQ86TC9 1320 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 SYNGAP1Q96PV0 1343 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 HTATSF1O43719 755 aaKnown RBP2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 ECE2O60344 883 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 PALMO75781 387 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 URI1O94763 535 aaPredicted RBP2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 TGM1P22735 817 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 RBMS1P29558 406 aaKnown RBP2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 CLCN2P51788 898 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 GUCY2FP51841 1108 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 COPAP53621 1224 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 BFSP2Q13515 415 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 FAM98CQ17RN3 349 aaKnown RBP2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 FHL5Q5TD97 284 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 RGMBQ6NW40 437 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 FASTKD5Q7L8L6 764 aaKnown RBP2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 FAM178BQ8IXR5 827 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 CLRN3Q8NCR9 226 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 SMCR8Q8TEV9 937 aaPredicted RBP2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 SNX21Q969T3 373 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 DNAJC1Q96KC8 554 aaKnown RBP2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 LACRTQ9GZZ8 138 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 KCND1Q9NSA2 647 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 KANSL1LA0AUZ9 987 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 FOXO6A8MYZ6 492 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 F8W8V4 182 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 IPO5O00410 1097 aaKnown RBP2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 SLC26A4O43511 780 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 NBNO60934 754 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 HIBADHP31937 336 aaKnown RBP2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms