RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 TNFRSF25Q93038 417 aa14.31□□□□□ -0.12
IFT88-202ENST00000351808 CRAMP1Q96RY5 1269 aa14.31□□□□□ -0.12
IFT88-202ENST00000351808 LZTS2Q9BRK4 669 aa14.31□□□□□ -0.12
IFT88-202ENST00000351808 TANGO6Q9C0B7 1094 aa14.31□□□□□ -0.12
IFT88-202ENST00000351808 PARP4Q9UKK3 1724 aaKnown RBP14.31□□□□□ -0.12
IFT88-202ENST00000351808 MYH4Q9Y623 1939 aa14.31□□□□□ -0.12
IFT88-202ENST00000351808 IDH1O75874 414 aaKnown RBP14.31□□□□□ -0.12
IFT88-202ENST00000351808 NLRP5P59047 1200 aa14.31□□□□□ -0.12
IFT88-202ENST00000351808 KLRC3Q07444 240 aa14.31□□□□□ -0.12
IFT88-202ENST00000351808 NPY5RQ15761 445 aa14.31□□□□□ -0.12
IFT88-202ENST00000351808 MAN2A1Q16706 1144 aa14.31□□□□□ -0.12
IFT88-202ENST00000351808 LRRC15Q8TF66 581 aa14.31□□□□□ -0.12
IFT88-202ENST00000351808 GLG1Q92896 1179 aa14.31□□□□□ -0.12
IFT88-202ENST00000351808 SLC7A6OSQ96CW6 309 aaPredicted RBP14.31□□□□□ -0.12
IFT88-202ENST00000351808 DDX27Q96GQ7 796 aaKnown RBP14.31□□□□□ -0.12
IFT88-202ENST00000351808 TGS1Q96RS0 853 aaKnown RBP14.31□□□□□ -0.12
IFT88-202ENST00000351808 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.31□□□□□ -0.12
IFT88-202ENST00000351808 CUEDC2Q9H467 287 aa14.31□□□□□ -0.12
IFT88-202ENST00000351808 SEC63Q9UGP8 760 aaKnown RBP14.31□□□□□ -0.12
IFT88-202ENST00000351808 FGFR4P22455 802 aa14.3□□□□□ -0.12
IFT88-202ENST00000351808 POU5F1Q01860 360 aaKnown RBP14.3□□□□□ -0.12
IFT88-202ENST00000351808 PABPC4Q13310 644 aaKnown RBP eCLIP14.3□□□□□ -0.12
IFT88-202ENST00000351808 RCN1Q15293 331 aa14.3□□□□□ -0.12
IFT88-202ENST00000351808 MEX3CQ5U5Q3 659 aaKnown RBP14.3□□□□□ -0.12
IFT88-202ENST00000351808 CKAP2Q8WWK9 683 aa14.3□□□□□ -0.12
IFT88-202ENST00000351808 HSFX1Q9UBD0 423 aa14.3□□□□□ -0.12
IFT88-202ENST00000351808 ADAMTS3O15072 1205 aa14.3□□□□□ -0.12
IFT88-202ENST00000351808 ZBTB48P10074 688 aaPredicted RBP14.3□□□□□ -0.12
IFT88-202ENST00000351808 LONP1P36776 959 aaKnown RBP14.3□□□□□ -0.12
IFT88-202ENST00000351808 RTP1P59025 263 aa14.3□□□□□ -0.12
IFT88-202ENST00000351808 OCRLQ01968 901 aa14.3□□□□□ -0.12
IFT88-202ENST00000351808 RFWD3Q6PCD5 774 aa14.3□□□□□ -0.12
IFT88-202ENST00000351808 MFSD6Q6ZSS7 791 aa14.3□□□□□ -0.12
IFT88-202ENST00000351808 BARGINQ6ZT62 677 aa14.3□□□□□ -0.12
IFT88-202ENST00000351808 HAPLN3Q96S86 360 aa14.3□□□□□ -0.12
IFT88-202ENST00000351808 NAP1L3Q99457 506 aaPredicted RBP14.3□□□□□ -0.12
IFT88-202ENST00000351808 ATP6V0A2Q9Y487 856 aa14.3□□□□□ -0.12
IFT88-202ENST00000351808 RPTORQ8N122 1335 aa14.3□□□□□ -0.12
IFT88-202ENST00000351808 NID2Q14112 1375 aa14.29□□□□□ -0.12
IFT88-202ENST00000351808 ATP5HO75947 161 aa14.29□□□□□ -0.12
IFT88-202ENST00000351808 CCDC15Q0P6D6 951 aa14.29□□□□□ -0.12
IFT88-202ENST00000351808 CBX3Q13185 183 aa14.29□□□□□ -0.12
IFT88-202ENST00000351808 RASA3Q14644 834 aa14.29□□□□□ -0.12
IFT88-202ENST00000351808 SETDB1Q15047 1291 aa14.29□□□□□ -0.12
IFT88-202ENST00000351808 DDB1Q16531 1140 aa14.29□□□□□ -0.12
IFT88-202ENST00000351808 TNFAIP8L3Q5GJ75 292 aa14.29□□□□□ -0.12
IFT88-202ENST00000351808 FAM83BQ5T0W9 1011 aa14.29□□□□□ -0.12
IFT88-202ENST00000351808 DUPD1Q68J44 220 aa14.29□□□□□ -0.12
IFT88-202ENST00000351808 SMC1BQ8NDV3 1235 aa14.29□□□□□ -0.12
IFT88-202ENST00000351808 FBXO41Q8TF61 875 aa14.29□□□□□ -0.12
IFT88-202ENST00000351808 ARHGEF2Q92974 986 aaKnown RBP14.29□□□□□ -0.12
IFT88-202ENST00000351808 LRRC59Q96AG4 307 aaKnown RBP14.29□□□□□ -0.12
IFT88-202ENST00000351808 NAPBQ9H115 298 aa14.29□□□□□ -0.12
IFT88-202ENST00000351808 STMN4Q9H169 189 aaPredicted RBP14.29□□□□□ -0.12
IFT88-202ENST00000351808 KBTBD4Q9NVX7 518 aa14.29□□□□□ -0.12
IFT88-202ENST00000351808 RTCBQ9Y3I0 505 aaKnown RBP14.29□□□□□ -0.12
IFT88-202ENST00000351808 DAAM1Q9Y4D1 1078 aa14.29□□□□□ -0.12
IFT88-202ENST00000351808 MROH7Q68CQ1 1323 aa14.29□□□□□ -0.12
IFT88-202ENST00000351808 SPEF2Q9C093 1822 aa14.29□□□□□ -0.12
IFT88-202ENST00000351808 NPHP3-ACAD11A0A0J9YXS1 232 aa14.29□□□□□ -0.12
IFT88-202ENST00000351808 TPD52L2O43399 206 aaKnown RBP14.29□□□□□ -0.12
IFT88-202ENST00000351808 GFPT2O94808 682 aa14.29□□□□□ -0.12
IFT88-202ENST00000351808 CBX6O95503 412 aa14.29□□□□□ -0.12
IFT88-202ENST00000351808 FGGP02679 453 aa14.29□□□□□ -0.12
IFT88-202ENST00000351808 LYNP07948 512 aa14.29□□□□□ -0.12
IFT88-202ENST00000351808 POLR2FP61218 127 aaKnown RBP14.29□□□□□ -0.12
IFT88-202ENST00000351808 RAPGEF1Q13905 1077 aa14.29□□□□□ -0.12
IFT88-202ENST00000351808 VSTM1Q6UX27 236 aa14.29□□□□□ -0.12
IFT88-202ENST00000351808 PEX26Q7Z412 305 aa14.29□□□□□ -0.12
IFT88-202ENST00000351808 RNF168Q8IYW5 571 aaPredicted RBP14.29□□□□□ -0.12
IFT88-202ENST00000351808 ARL10Q8N8L6 244 aa14.29□□□□□ -0.12
IFT88-202ENST00000351808 LRRC57Q8N9N7 239 aa14.29□□□□□ -0.12
IFT88-202ENST00000351808 ERP44Q9BS26 406 aa14.29□□□□□ -0.12
IFT88-202ENST00000351808 CHKBQ9Y259 395 aa14.29□□□□□ -0.12
IFT88-202ENST00000351808 COMMD3-BMI1R4GMX3 469 aa14.29□□□□□ -0.12
IFT88-202ENST00000351808 ZNF532Q9HCE3 1301 aa14.29□□□□□ -0.12
IFT88-202ENST00000351808 CCDC166P0CW27 439 aa14.28□□□□□ -0.12
IFT88-202ENST00000351808 T-ENOLP0DO92 83 aa14.28□□□□□ -0.12
IFT88-202ENST00000351808 ASIC1P78348 528 aa14.28□□□□□ -0.12
IFT88-202ENST00000351808 GIT2Q14161 759 aa14.28□□□□□ -0.12
IFT88-202ENST00000351808 MPP2Q14168 576 aa14.28□□□□□ -0.12
IFT88-202ENST00000351808 LIN52Q52LA3 116 aa14.28□□□□□ -0.12
IFT88-202ENST00000351808 TCERG1LQ5VWI1 586 aa14.28□□□□□ -0.12
IFT88-202ENST00000351808 OLFML2BQ68BL8 750 aa14.28□□□□□ -0.12
IFT88-202ENST00000351808 LRRC74BQ6ZQY2 392 aa14.28□□□□□ -0.12
IFT88-202ENST00000351808 DTX3LQ8TDB6 740 aa14.28□□□□□ -0.12
IFT88-202ENST00000351808 INPP5DQ92835 1189 aa14.28□□□□□ -0.12
IFT88-202ENST00000351808 ABTB1Q969K4 478 aaPredicted RBP14.28□□□□□ -0.12
IFT88-202ENST00000351808 EPB41L4AQ9HCS5 686 aaPredicted RBP14.28□□□□□ -0.12
IFT88-202ENST00000351808 KRT36O76013 467 aa14.28□□□□□ -0.12
IFT88-202ENST00000351808 PLEKHA8P1O95397 391 aa14.28□□□□□ -0.12
IFT88-202ENST00000351808 LMNAP02545 664 aaKnown RBP14.28□□□□□ -0.12
IFT88-202ENST00000351808 UBA7P41226 1012 aa14.28□□□□□ -0.12
IFT88-202ENST00000351808 DR1Q01658 176 aa14.28□□□□□ -0.12
IFT88-202ENST00000351808 KLHL30Q0D2K2 578 aa14.28□□□□□ -0.12
IFT88-202ENST00000351808 LONRF1Q17RB8 773 aa14.28□□□□□ -0.12
IFT88-202ENST00000351808 ZDHHC24Q6UX98 284 aa14.28□□□□□ -0.12
IFT88-202ENST00000351808 SNRNP27Q8WVK2 155 aaKnown RBP14.28□□□□□ -0.12
IFT88-202ENST00000351808 DYDC2Q96IM9 177 aa14.28□□□□□ -0.12
IFT88-202ENST00000351808 DHX36Q9H2U1 1008 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms