RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 PCDHA6Q9UN73 950 aa17.96■□□□□ 0.47
COPE-202ENST00000349893 PCDHA8Q9Y5H6 950 aa17.96■□□□□ 0.47
COPE-202ENST00000349893 TAF6LQ9Y6J9 622 aa17.96■□□□□ 0.47
COPE-202ENST00000349893 DENND4AQ7Z401 1863 aa17.96■□□□□ 0.47
COPE-202ENST00000349893 EVPLQ92817 2033 aa17.95■□□□□ 0.46
COPE-202ENST00000349893 SPDYE3A6NKU9 549 aa17.95■□□□□ 0.46
COPE-202ENST00000349893 E7EWF7 191 aa17.95■□□□□ 0.46
COPE-202ENST00000349893 IBSPP21815 317 aaPredicted RBP17.95■□□□□ 0.46
COPE-202ENST00000349893 GNAQP50148 359 aa17.95■□□□□ 0.46
COPE-202ENST00000349893 CRYBB1P53674 252 aaPredicted RBP17.95■□□□□ 0.46
COPE-202ENST00000349893 KRT17Q04695 432 aa17.95■□□□□ 0.46
COPE-202ENST00000349893 ITGB3BPQ13352 177 aaPredicted RBP17.95■□□□□ 0.46
COPE-202ENST00000349893 SMC1AQ14683 1233 aaKnown RBP17.95■□□□□ 0.46
COPE-202ENST00000349893 UBE2SQ16763 222 aa17.95■□□□□ 0.46
COPE-202ENST00000349893 KIAA1841Q6NSI8 718 aa17.95■□□□□ 0.46
COPE-202ENST00000349893 TMC7Q7Z402 723 aa17.95■□□□□ 0.46
COPE-202ENST00000349893 RALYLQ86SE5 291 aaKnown RBP17.95■□□□□ 0.46
COPE-202ENST00000349893 TEX2Q8IWB9 1127 aa17.95■□□□□ 0.46
COPE-202ENST00000349893 MB21D2Q8IYB1 491 aaPredicted RBP17.95■□□□□ 0.46
COPE-202ENST00000349893 ZNF654Q8IZM8 581 aa17.95■□□□□ 0.46
COPE-202ENST00000349893 LRRC43Q8N309 656 aa17.95■□□□□ 0.46
COPE-202ENST00000349893 PLCD3Q8N3E9 789 aa17.95■□□□□ 0.46
COPE-202ENST00000349893 SRBD1Q8N5C6 995 aaKnown RBP17.95■□□□□ 0.46
COPE-202ENST00000349893 ZNF558Q96NG5 402 aa17.95■□□□□ 0.46
COPE-202ENST00000349893 SDF4Q9BRK5 362 aa17.95■□□□□ 0.46
COPE-202ENST00000349893 LY9Q9HBG7 655 aa17.95■□□□□ 0.46
COPE-202ENST00000349893 SPG21Q9NZD8 308 aa17.95■□□□□ 0.46
COPE-202ENST00000349893 GINS2Q9Y248 185 aa17.95■□□□□ 0.46
COPE-202ENST00000349893 CLASP2O75122 1294 aaKnown RBP17.94■□□□□ 0.46
COPE-202ENST00000349893 GPR32O75388 356 aa17.94■□□□□ 0.46
COPE-202ENST00000349893 PLEKHA8P1O95397 391 aa17.94■□□□□ 0.46
COPE-202ENST00000349893 ASGR2P07307 311 aa17.94■□□□□ 0.46
COPE-202ENST00000349893 SLC39A11Q8N1S5 342 aa17.94■□□□□ 0.46
COPE-202ENST00000349893 TDRD5Q8NAT2 981 aaKnown RBP17.94■□□□□ 0.46
COPE-202ENST00000349893 CYP2W1Q8TAV3 490 aa17.94■□□□□ 0.46
COPE-202ENST00000349893 MTA3Q9BTC8 594 aa17.94■□□□□ 0.46
COPE-202ENST00000349893 ARP10275 920 aa17.93■□□□□ 0.46
COPE-202ENST00000349893 AOC1P19801 751 aa17.93■□□□□ 0.46
COPE-202ENST00000349893 PBX3P40426 434 aa17.93■□□□□ 0.46
COPE-202ENST00000349893 AAMPQ13685 434 aa17.93■□□□□ 0.46
COPE-202ENST00000349893 ZNF484Q5JVG2 852 aa17.93■□□□□ 0.46
COPE-202ENST00000349893 B4GALNT3Q6L9W6 998 aa17.93■□□□□ 0.46
COPE-202ENST00000349893 ABHD15Q6UXT9 468 aa17.93■□□□□ 0.46
COPE-202ENST00000349893 CCDC105Q8IYK2 499 aa17.93■□□□□ 0.46
COPE-202ENST00000349893 OSMRQ99650 979 aa17.93■□□□□ 0.46
COPE-202ENST00000349893 MYL10Q9BUA6 226 aa17.93■□□□□ 0.46
COPE-202ENST00000349893 MFSD1Q9H3U5 465 aa17.93■□□□□ 0.46
COPE-202ENST00000349893 AGO4Q9HCK5 861 aaKnown RBP17.93■□□□□ 0.46
COPE-202ENST00000349893 DZANK1Q9NVP4 752 aa17.93■□□□□ 0.46
COPE-202ENST00000349893 LIMD1Q9UGP4 676 aa17.93■□□□□ 0.46
COPE-202ENST00000349893 C22orf31O95567 290 aa17.92■□□□□ 0.46
COPE-202ENST00000349893 EOMESO95936 686 aa17.92■□□□□ 0.46
COPE-202ENST00000349893 CCNE2O96020 404 aa17.92■□□□□ 0.46
COPE-202ENST00000349893 NPR3P17342 541 aa17.92■□□□□ 0.46
COPE-202ENST00000349893 PTH1RQ03431 593 aa17.92■□□□□ 0.46
COPE-202ENST00000349893 KIZQ2M2Z5 673 aa17.92■□□□□ 0.46
COPE-202ENST00000349893 CEP55Q53EZ4 464 aa17.92■□□□□ 0.46
COPE-202ENST00000349893 IRAK3Q9Y616 596 aa17.92■□□□□ 0.46
COPE-202ENST00000349893 NCOR2Q9Y618 2525 aa17.92■□□□□ 0.46
COPE-202ENST00000349893 EPG5Q9HCE0 2579 aa17.91■□□□□ 0.46
COPE-202ENST00000349893 MEIS1O00470 390 aa17.91■□□□□ 0.46
COPE-202ENST00000349893 FAM160B1Q5W0V3 765 aa17.91■□□□□ 0.46
COPE-202ENST00000349893 CCDC60Q8IWA6 550 aaPredicted RBP17.91■□□□□ 0.46
COPE-202ENST00000349893 RWDD1Q9H446 243 aaPredicted RBP17.91■□□□□ 0.46
COPE-202ENST00000349893 CYP26B1Q9NR63 512 aa17.91■□□□□ 0.46
COPE-202ENST00000349893 PI15O43692 258 aa17.9■□□□□ 0.46
COPE-202ENST00000349893 ATP4AP20648 1035 aa17.9■□□□□ 0.46
COPE-202ENST00000349893 ANGPT1Q15389 498 aa17.9■□□□□ 0.46
COPE-202ENST00000349893 CLLU1OSQ5K130 101 aa17.9■□□□□ 0.46
COPE-202ENST00000349893 ATAT1Q5SQI0 421 aa17.9■□□□□ 0.46
COPE-202ENST00000349893 RARS2Q5T160 578 aaKnown RBP17.9■□□□□ 0.46
COPE-202ENST00000349893 NIPA1Q7RTP0 329 aa17.9■□□□□ 0.46
COPE-202ENST00000349893 ZNF598Q86UK7 904 aaKnown RBP17.9■□□□□ 0.46
COPE-202ENST00000349893 ECHDC2Q86YB7 292 aa17.9■□□□□ 0.46
COPE-202ENST00000349893 RTP3Q9BQQ7 232 aa17.9■□□□□ 0.46
COPE-202ENST00000349893 ZBP1Q9H171 429 aa17.9■□□□□ 0.46
COPE-202ENST00000349893 SEMA4AQ9H3S1 761 aa17.9■□□□□ 0.46
COPE-202ENST00000349893 CEP250Q9BV73 2442 aa17.9■□□□□ 0.46
COPE-202ENST00000349893 OTOGLQ3ZCN5 2332 aa17.89■□□□□ 0.46
COPE-202ENST00000349893 WEE2P0C1S8 567 aa17.89■□□□□ 0.45
COPE-202ENST00000349893 ABI1Q8IZP0 508 aa17.89■□□□□ 0.45
COPE-202ENST00000349893 CMTR1Q8N1G2 835 aaKnown RBP17.89■□□□□ 0.45
COPE-202ENST00000349893 ZNF710Q8N1W2 664 aa17.89■□□□□ 0.45
COPE-202ENST00000349893 DTWD2Q8NBA8 298 aa17.89■□□□□ 0.45
COPE-202ENST00000349893 SLC22A17Q8WUG5 538 aa17.89■□□□□ 0.45
COPE-202ENST00000349893 ADAMTS10Q9H324 1103 aa17.89■□□□□ 0.45
COPE-202ENST00000349893 ZNF302Q9NR11 478 aa17.89■□□□□ 0.45
COPE-202ENST00000349893 DBR1Q9UK59 544 aaKnown RBP17.89■□□□□ 0.45
COPE-202ENST00000349893 DUSP12Q9UNI6 340 aa17.89■□□□□ 0.45
COPE-202ENST00000349893 KMT2BQ9UMN6 2715 aaPredicted RBP17.89■□□□□ 0.45
COPE-202ENST00000349893 A0A0U1RQF3 1178 aa17.88■□□□□ 0.45
COPE-202ENST00000349893 BACH1O14867 736 aa17.88■□□□□ 0.45
COPE-202ENST00000349893 DHX15O43143 795 aaKnown RBP17.88■□□□□ 0.45
COPE-202ENST00000349893 FOSP01100 380 aaPredicted RBP17.88■□□□□ 0.45
COPE-202ENST00000349893 VTNP04004 478 aa17.88■□□□□ 0.45
COPE-202ENST00000349893 POLGP54098 1239 aaPredicted RBP17.88■□□□□ 0.45
COPE-202ENST00000349893 TDGQ13569 410 aa17.88■□□□□ 0.45
COPE-202ENST00000349893 GIT2Q14161 759 aa17.88■□□□□ 0.45
COPE-202ENST00000349893 PDXDC2PQ6P474 469 aa17.88■□□□□ 0.45
COPE-202ENST00000349893 TMTC2Q8N394 836 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms