RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 IGFLR1Q9H665 355 aa11.01□□□□□ -0.65
MRPL55-204ENST00000348259 CFAP45Q9UL16 551 aa11.01□□□□□ -0.65
MRPL55-204ENST00000348259 BARX2Q9UMQ3 279 aaPredicted RBP11.01□□□□□ -0.65
MRPL55-204ENST00000348259 PCDHGC5Q9Y5F6 944 aa11.01□□□□□ -0.65
MRPL55-204ENST00000348259 CDY2AQ9Y6F7 541 aa11.01□□□□□ -0.65
MRPL55-204ENST00000348259 KDM3AQ9Y4C1 1321 aa11.01□□□□□ -0.65
MRPL55-204ENST00000348259 DENND4AQ7Z401 1863 aa11□□□□□ -0.65
MRPL55-204ENST00000348259 WDR81Q562E7 1941 aa11□□□□□ -0.65
MRPL55-204ENST00000348259 SMARCA1P28370 1054 aa11□□□□□ -0.65
MRPL55-204ENST00000348259 CD52P31358 61 aa11□□□□□ -0.65
MRPL55-204ENST00000348259 TCF7P36402 384 aaPredicted RBP11□□□□□ -0.65
MRPL55-204ENST00000348259 NDUFV1P49821 464 aa11□□□□□ -0.65
MRPL55-204ENST00000348259 GNAQP50148 359 aa11□□□□□ -0.65
MRPL55-204ENST00000348259 MRPS6P82932 125 aaKnown RBP11□□□□□ -0.65
MRPL55-204ENST00000348259 DNM1Q05193 864 aaKnown RBP11□□□□□ -0.65
MRPL55-204ENST00000348259 TRAF1Q13077 416 aa11□□□□□ -0.65
MRPL55-204ENST00000348259 PPFIA1Q13136 1202 aa11□□□□□ -0.65
MRPL55-204ENST00000348259 GSE1Q14687 1217 aa11□□□□□ -0.65
MRPL55-204ENST00000348259 GRIK4Q16099 956 aa11□□□□□ -0.65
MRPL55-204ENST00000348259 UTP14CQ5TAP6 766 aaKnown RBP11□□□□□ -0.65
MRPL55-204ENST00000348259 TMEM184AQ6ZMB5 413 aa11□□□□□ -0.65
MRPL55-204ENST00000348259 HOMER1Q86YM7 354 aa11□□□□□ -0.65
MRPL55-204ENST00000348259 NPAS4Q8IUM7 802 aa11□□□□□ -0.65
MRPL55-204ENST00000348259 CTCFLQ8NI51 663 aaPredicted RBP11□□□□□ -0.65
MRPL55-204ENST00000348259 DNAJB3Q8WWF6 145 aa11□□□□□ -0.65
MRPL55-204ENST00000348259 LZTS2Q9BRK4 669 aa11□□□□□ -0.65
MRPL55-204ENST00000348259 S1PR5Q9H228 398 aa11□□□□□ -0.65
MRPL55-204ENST00000348259 RTEL1Q9NZ71 1219 aa11□□□□□ -0.65
MRPL55-204ENST00000348259 TUBE1Q9UJT0 475 aa11□□□□□ -0.65
MRPL55-204ENST00000348259 EVPLQ92817 2033 aa11□□□□□ -0.65
MRPL55-204ENST00000348259 IGSF9BQ9UPX0 1349 aa11□□□□□ -0.65
MRPL55-204ENST00000348259 FSCN2O14926 492 aa10.99□□□□□ -0.65
MRPL55-204ENST00000348259 ITGB5P18084 799 aa10.99□□□□□ -0.65
MRPL55-204ENST00000348259 NCLP19338 710 aaKnown RBP10.99□□□□□ -0.65
MRPL55-204ENST00000348259 RXRAP19793 462 aa10.99□□□□□ -0.65
MRPL55-204ENST00000348259 U2AF2P26368 475 aaKnown RBP eCLIP10.99□□□□□ -0.652e-8■□□□□ 10
MRPL55-204ENST00000348259 NRIP1P48552 1158 aa10.99□□□□□ -0.65
MRPL55-204ENST00000348259 GATMP50440 423 aa10.99□□□□□ -0.65
MRPL55-204ENST00000348259 UBE2HP62256 183 aa10.99□□□□□ -0.65
MRPL55-204ENST00000348259 RBM10P98175 930 aaKnown RBP10.99□□□□□ -0.65
MRPL55-204ENST00000348259 DUSP6Q16828 381 aa10.99□□□□□ -0.65
MRPL55-204ENST00000348259 TMTC3Q6ZXV5 915 aa10.99□□□□□ -0.65
MRPL55-204ENST00000348259 RAB11FIP4Q86YS3 637 aa10.99□□□□□ -0.65
MRPL55-204ENST00000348259 GPRASP2Q96D09 838 aa10.99□□□□□ -0.65
MRPL55-204ENST00000348259 ZBTB10Q96DT7 871 aa10.99□□□□□ -0.65
MRPL55-204ENST00000348259 ZNF396Q96N95 335 aaPredicted RBP10.99□□□□□ -0.65
MRPL55-204ENST00000348259 SLC26A6Q9BXS9 759 aa10.99□□□□□ -0.65
MRPL55-204ENST00000348259 FTHL17Q9BXU8 183 aa10.99□□□□□ -0.65
MRPL55-204ENST00000348259 ERAP1Q9NZ08 941 aa10.99□□□□□ -0.65
MRPL55-204ENST00000348259 UBIAD1Q9Y5Z9 338 aa10.99□□□□□ -0.65
MRPL55-204ENST00000348259 DTNBO60941 627 aa10.98□□□□□ -0.65
MRPL55-204ENST00000348259 RPLP2P05387 115 aaKnown RBP10.98□□□□□ -0.65
MRPL55-204ENST00000348259 AVPR2P30518 371 aa10.98□□□□□ -0.65
MRPL55-204ENST00000348259 NUBP1P53384 320 aa10.98□□□□□ -0.65
MRPL55-204ENST00000348259 UBE3AQ05086 875 aa10.98□□□□□ -0.65
MRPL55-204ENST00000348259 TRIM29Q14134 588 aa10.98□□□□□ -0.65
MRPL55-204ENST00000348259 PTPN21Q16825 1174 aa10.98□□□□□ -0.65
MRPL55-204ENST00000348259 USP17L6PQ6QN14 398 aa10.98□□□□□ -0.65
MRPL55-204ENST00000348259 FERMT3Q86UX7 667 aa10.98□□□□□ -0.65
MRPL55-204ENST00000348259 SUGP1Q8IWZ8 645 aaKnown RBP10.98□□□□□ -0.65
MRPL55-204ENST00000348259 GIMAP8Q8ND71 665 aaPredicted RBP10.98□□□□□ -0.65
MRPL55-204ENST00000348259 RASGRP4Q8TDF6 673 aa10.98□□□□□ -0.65
MRPL55-204ENST00000348259 SEPT1Q8WYJ6 367 aa10.98□□□□□ -0.65
MRPL55-204ENST00000348259 PHKBQ93100 1093 aa10.98□□□□□ -0.65
MRPL55-204ENST00000348259 PPP2R3CQ969Q6 453 aa10.98□□□□□ -0.65
MRPL55-204ENST00000348259 SPZ1Q9BXG8 430 aa10.98□□□□□ -0.65
MRPL55-204ENST00000348259 FAM86C1Q9NVL1 165 aa10.98□□□□□ -0.65
MRPL55-204ENST00000348259 RCOR1Q9UKL0 485 aa10.98□□□□□ -0.65
MRPL55-204ENST00000348259 PADI3Q9ULW8 664 aa10.98□□□□□ -0.65
MRPL55-204ENST00000348259 MGEA5O60502 916 aa10.97□□□□□ -0.65
MRPL55-204ENST00000348259 GFRA3O60609 400 aa10.97□□□□□ -0.65
MRPL55-204ENST00000348259 CSPG5O95196 566 aa10.97□□□□□ -0.65
MRPL55-204ENST00000348259 PDGFBP01127 241 aaPredicted RBP10.97□□□□□ -0.65
MRPL55-204ENST00000348259 SCG2P13521 617 aa10.97□□□□□ -0.65
MRPL55-204ENST00000348259 INSRRP14616 1297 aa10.97□□□□□ -0.65
MRPL55-204ENST00000348259 XBP1P17861 261 aa10.97□□□□□ -0.65
MRPL55-204ENST00000348259 AKAP17AQ02040 695 aaKnown RBP10.97□□□□□ -0.65
MRPL55-204ENST00000348259 SYCE2Q6PIF2 218 aa10.97□□□□□ -0.65
MRPL55-204ENST00000348259 FAM43BQ6ZT52 329 aaPredicted RBP10.97□□□□□ -0.65
MRPL55-204ENST00000348259 RSPH3Q86UC2 560 aa10.97□□□□□ -0.65
MRPL55-204ENST00000348259 GPT2Q8TD30 523 aa10.97□□□□□ -0.65
MRPL55-204ENST00000348259 CHAMP1Q96JM3 812 aa10.97□□□□□ -0.65
MRPL55-204ENST00000348259 CDCA3Q99618 268 aaPredicted RBP10.97□□□□□ -0.65
MRPL55-204ENST00000348259 FOXP1Q9H334 677 aaPredicted RBP10.97□□□□□ -0.65
MRPL55-204ENST00000348259 HCSTQ9UBK5 93 aa10.97□□□□□ -0.65
MRPL55-204ENST00000348259 PCDHA2Q9Y5H9 948 aa10.97□□□□□ -0.65
MRPL55-204ENST00000348259 TRPV2Q9Y5S1 764 aa10.97□□□□□ -0.65
MRPL55-204ENST00000348259 RRN3P2A6NIE6 340 aa10.96□□□□□ -0.65
MRPL55-204ENST00000348259 MARK3P27448 753 aa10.96□□□□□ -0.65
MRPL55-204ENST00000348259 SARSP49591 514 aaKnown RBP10.96□□□□□ -0.65
MRPL55-204ENST00000348259 ERVFC1P60507 584 aa10.96□□□□□ -0.65
MRPL55-204ENST00000348259 SP4Q02446 784 aa10.96□□□□□ -0.65
MRPL55-204ENST00000348259 SAFBQ15424 915 aaKnown RBP eCLIP10.96□□□□□ -0.65
MRPL55-204ENST00000348259 PAN2Q504Q3 1202 aaKnown RBP10.96□□□□□ -0.65
MRPL55-204ENST00000348259 NLRX1Q86UT6 975 aa10.96□□□□□ -0.65
MRPL55-204ENST00000348259 SRBD1Q8N5C6 995 aaKnown RBP10.96□□□□□ -0.65
MRPL55-204ENST00000348259 LEO1Q8WVC0 666 aaPredicted RBP10.96□□□□□ -0.65
MRPL55-204ENST00000348259 SPATA32Q96LK8 384 aa10.96□□□□□ -0.65
MRPL55-204ENST00000348259 SMARCAD1Q9H4L7 1026 aa10.96□□□□□ -0.65
MRPL55-204ENST00000348259 CWH43Q9H720 699 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms