RNA–Protein interactions for RNA: ENST00000347598.8

CACNA1C-204, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,655 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-204ENST00000347598 TRIM54Q9BYV2 358 aa12.73□□□□□ -0.37
CACNA1C-204ENST00000347598 RGL1Q9NZL6 768 aa12.73□□□□□ -0.37
CACNA1C-204ENST00000347598 THOC2Q8NI27 1593 aaKnown RBP12.73□□□□□ -0.37
CACNA1C-204ENST00000347598 BLMP54132 1417 aaPredicted RBP12.73□□□□□ -0.37
CACNA1C-204ENST00000347598 SUPT3HB4E1H0 165 aa12.73□□□□□ -0.37
CACNA1C-204ENST00000347598 E9PMD0 336 aa12.73□□□□□ -0.37
CACNA1C-204ENST00000347598 GRIN1Q05586 938 aa12.73□□□□□ -0.37
CACNA1C-204ENST00000347598 ZNF699Q32M78 642 aa12.73□□□□□ -0.37
CACNA1C-204ENST00000347598 TJAP1Q5JTD0 557 aa12.73□□□□□ -0.37
CACNA1C-204ENST00000347598 PKN3Q6P5Z2 889 aa12.73□□□□□ -0.37
CACNA1C-204ENST00000347598 RTKN2Q8IZC4 609 aa12.73□□□□□ -0.37
CACNA1C-204ENST00000347598 EXOC4Q96A65 974 aa12.73□□□□□ -0.37
CACNA1C-204ENST00000347598 POLE2P56282 527 aa12.73□□□□□ -0.37
CACNA1C-204ENST00000347598 VEPH1Q14D04 833 aa12.73□□□□□ -0.37
CACNA1C-204ENST00000347598 EFTUD2Q15029 972 aaKnown RBP eCLIP12.73□□□□□ -0.37
CACNA1C-204ENST00000347598 ZNF568Q3ZCX4 644 aa12.73□□□□□ -0.37
CACNA1C-204ENST00000347598 CCDC157Q569K6 752 aa12.73□□□□□ -0.37
CACNA1C-204ENST00000347598 DHX36Q9H2U1 1008 aaKnown RBP12.73□□□□□ -0.37
CACNA1C-204ENST00000347598 ASNSD1Q9NWL6 643 aa12.73□□□□□ -0.37
CACNA1C-204ENST00000347598 PEG3Q9GZU2 1588 aa12.72□□□□□ -0.37
CACNA1C-204ENST00000347598 PTPN21Q16825 1174 aa12.72□□□□□ -0.37
CACNA1C-204ENST00000347598 ZFP42Q96MM3 310 aa12.72□□□□□ -0.37
CACNA1C-204ENST00000347598 SPON2Q9BUD6 331 aa12.72□□□□□ -0.37
CACNA1C-204ENST00000347598 VPS11Q9H270 941 aa12.72□□□□□ -0.37
CACNA1C-204ENST00000347598 KDM4CQ9H3R0 1056 aa12.72□□□□□ -0.37
CACNA1C-204ENST00000347598 SAYSD1Q9NPB0 183 aa12.72□□□□□ -0.37
CACNA1C-204ENST00000347598 RAPGEF6Q8TEU7 1601 aa12.72□□□□□ -0.37
CACNA1C-204ENST00000347598 COPEO14579 308 aa12.72□□□□□ -0.37
CACNA1C-204ENST00000347598 MAPK13O15264 365 aa12.72□□□□□ -0.37
CACNA1C-204ENST00000347598 TMPRSS15P98073 1019 aa12.72□□□□□ -0.37
CACNA1C-204ENST00000347598 SCRN1Q12765 414 aa12.72□□□□□ -0.37
CACNA1C-204ENST00000347598 TOPORSQ9NS56 1045 aaPredicted RBP12.72□□□□□ -0.37
CACNA1C-204ENST00000347598 MAP3K20Q9NYL2 800 aaKnown RBP12.72□□□□□ -0.37
CACNA1C-204ENST00000347598 PCDHA13Q9Y5I0 950 aa12.72□□□□□ -0.37
CACNA1C-204ENST00000347598 SYTL3Q4VX76 610 aa12.72□□□□□ -0.37
CACNA1C-204ENST00000347598 RHPN2Q8IUC4 686 aa12.72□□□□□ -0.37
CACNA1C-204ENST00000347598 PHF21AQ96BD5 680 aa12.72□□□□□ -0.37
CACNA1C-204ENST00000347598 ATP6V0A4Q9HBG4 840 aa12.72□□□□□ -0.37
CACNA1C-204ENST00000347598 EPHB4P54760 987 aa12.72□□□□□ -0.37
CACNA1C-204ENST00000347598 FSCBQ5H9T9 825 aa12.72□□□□□ -0.37
CACNA1C-204ENST00000347598 TMC4Q7Z404 712 aa12.72□□□□□ -0.37
CACNA1C-204ENST00000347598 CATSPER3Q86XQ3 398 aa12.72□□□□□ -0.37
CACNA1C-204ENST00000347598 ZMYND12Q9H0C1 365 aa12.72□□□□□ -0.37
CACNA1C-204ENST00000347598 SERPINB13Q9UIV8 391 aa12.72□□□□□ -0.37
CACNA1C-204ENST00000347598 KPNA7A9QM74 516 aa12.72□□□□□ -0.37
CACNA1C-204ENST00000347598 ACSL3O95573 720 aa12.72□□□□□ -0.37
CACNA1C-204ENST00000347598 DDX5P17844 614 aaKnown RBP12.72□□□□□ -0.37
CACNA1C-204ENST00000347598 ADCK2Q7Z695 626 aa12.72□□□□□ -0.37
CACNA1C-204ENST00000347598 FOXP1Q9H334 677 aaPredicted RBP12.72□□□□□ -0.37
CACNA1C-204ENST00000347598 NHEJ1Q9H9Q4 299 aaPredicted RBP12.72□□□□□ -0.37
CACNA1C-204ENST00000347598 KCNH4Q9UQ05 1017 aa12.72□□□□□ -0.37
CACNA1C-204ENST00000347598 CLDN3O15551 220 aa12.71□□□□□ -0.37
CACNA1C-204ENST00000347598 KCNQ3O43525 872 aa12.71□□□□□ -0.37
CACNA1C-204ENST00000347598 LMNAP02545 664 aaKnown RBP12.71□□□□□ -0.37
CACNA1C-204ENST00000347598 PDIA3P30101 505 aaKnown RBP12.71□□□□□ -0.37
CACNA1C-204ENST00000347598 SMAD1Q15797 465 aaKnown RBP12.71□□□□□ -0.37
CACNA1C-204ENST00000347598 DDIASQ8IXT1 998 aa12.71□□□□□ -0.37
CACNA1C-204ENST00000347598 PDIK1LQ8N165 341 aa12.71□□□□□ -0.37
CACNA1C-204ENST00000347598 ZNF507Q8TCN5 953 aa12.71□□□□□ -0.37
CACNA1C-204ENST00000347598 RAET1EQ8TD07 263 aa12.71□□□□□ -0.37
CACNA1C-204ENST00000347598 TSSK1BQ9BXA7 367 aa12.71□□□□□ -0.37
CACNA1C-204ENST00000347598 MAN1A2O60476 641 aa12.71□□□□□ -0.37
CACNA1C-204ENST00000347598 CTNND1O60716 968 aaKnown RBP12.71□□□□□ -0.37
CACNA1C-204ENST00000347598 RALAP11233 206 aa12.71□□□□□ -0.37
CACNA1C-204ENST00000347598 ADORA2BP29275 332 aa12.71□□□□□ -0.37
CACNA1C-204ENST00000347598 GRAMD4Q6IC98 578 aa12.71□□□□□ -0.37
CACNA1C-204ENST00000347598 DYNLL2Q96FJ2 89 aa12.71□□□□□ -0.37
CACNA1C-204ENST00000347598 RAVER2Q9HCJ3 691 aaKnown RBP12.71□□□□□ -0.37
CACNA1C-204ENST00000347598 ZC3H4Q9UPT8 1303 aaKnown RBP12.71□□□□□ -0.37
CACNA1C-204ENST00000347598 SPAG7O75391 227 aa12.71□□□□□ -0.37
CACNA1C-204ENST00000347598 USP17L8P0C7I0 530 aa12.71□□□□□ -0.37
CACNA1C-204ENST00000347598 MAP4P27816 1152 aaKnown RBP12.71□□□□□ -0.37
CACNA1C-204ENST00000347598 SLC7A5Q01650 507 aa12.71□□□□□ -0.37
CACNA1C-204ENST00000347598 AP1ARQ63HQ0 302 aa12.71□□□□□ -0.37
CACNA1C-204ENST00000347598 PPP1R13BQ96KQ4 1090 aa12.71□□□□□ -0.37
CACNA1C-204ENST00000347598 C6orf203Q9P0P8 240 aaPredicted RBP12.71□□□□□ -0.37
CACNA1C-204ENST00000347598 PJA2O43164 708 aa12.71□□□□□ -0.38
CACNA1C-204ENST00000347598 SERPINI2O75830 405 aa12.71□□□□□ -0.38
CACNA1C-204ENST00000347598 SMARCA1P28370 1054 aa12.71□□□□□ -0.38
CACNA1C-204ENST00000347598 KCNQ4P56696 695 aa12.71□□□□□ -0.38
CACNA1C-204ENST00000347598 ANKRD40Q6AI12 368 aa12.71□□□□□ -0.38
CACNA1C-204ENST00000347598 TRIM33Q9UPN9 1127 aa12.71□□□□□ -0.38
CACNA1C-204ENST00000347598 APOBEC2Q9Y235 224 aaKnown RBP12.71□□□□□ -0.38
CACNA1C-204ENST00000347598 A0A0G2JND7 137 aa12.71□□□□□ -0.38
CACNA1C-204ENST00000347598 CCDC151A5D8V7 595 aa12.71□□□□□ -0.38
CACNA1C-204ENST00000347598 IPO5O00410 1097 aaKnown RBP12.71□□□□□ -0.38
CACNA1C-204ENST00000347598 BBOX1O75936 387 aa12.71□□□□□ -0.38
CACNA1C-204ENST00000347598 KRT8P05787 483 aa12.71□□□□□ -0.38
CACNA1C-204ENST00000347598 GRIK1P39086 918 aa12.71□□□□□ -0.38
CACNA1C-204ENST00000347598 RAD51Q06609 339 aa12.71□□□□□ -0.38
CACNA1C-204ENST00000347598 ALCAMQ13740 583 aa12.71□□□□□ -0.38
CACNA1C-204ENST00000347598 MEI1Q5TIA1 1274 aa12.71□□□□□ -0.38
CACNA1C-204ENST00000347598 RGS9BPQ6ZS82 235 aa12.71□□□□□ -0.38
CACNA1C-204ENST00000347598 UBE4BO95155 1302 aa12.7□□□□□ -0.38
CACNA1C-204ENST00000347598 C21orf2O43822 256 aa12.7□□□□□ -0.38
CACNA1C-204ENST00000347598 CYBBP04839 570 aa12.7□□□□□ -0.38
CACNA1C-204ENST00000347598 KCNJ6P48051 423 aa12.7□□□□□ -0.38
CACNA1C-204ENST00000347598 MTMR1Q13613 665 aa12.7□□□□□ -0.38
CACNA1C-204ENST00000347598 GRAMD1CQ8IYS0 662 aa12.7□□□□□ -0.38
CACNA1C-204ENST00000347598 RMDN1Q96DB5 314 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms