RNA–Protein interactions for RNA: ENST00000347529.7

EPB41-202, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best) BASIC

Gene EPB41, Length 2,676 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-202ENST00000347529 KANSL2Q9H9L4 492 aa9.43□□□□□ -0.9
EPB41-202ENST00000347529 ARHGEF3Q9NR81 526 aa9.43□□□□□ -0.9
EPB41-202ENST00000347529 EMILIN3Q9NT22 766 aa9.43□□□□□ -0.9
EPB41-202ENST00000347529 ARMCX3Q9UH62 379 aaPredicted RBP9.43□□□□□ -0.9
EPB41-202ENST00000347529 HDAC9Q9UKV0 1011 aa9.43□□□□□ -0.9
EPB41-202ENST00000347529 NENFQ9UMX5 172 aa9.43□□□□□ -0.9
EPB41-202ENST00000347529 LAMB2P55268 1798 aa9.43□□□□□ -0.9
EPB41-202ENST00000347529 KDM3AQ9Y4C1 1321 aa9.43□□□□□ -0.9
EPB41-202ENST00000347529 SMIM23A6NLE4 172 aa9.42□□□□□ -0.9
EPB41-202ENST00000347529 PODXLO00592 558 aa9.42□□□□□ -0.9
EPB41-202ENST00000347529 RASGRF2O14827 1237 aa9.42□□□□□ -0.9
EPB41-202ENST00000347529 OAS1P00973 400 aaKnown RBP9.42□□□□□ -0.9
EPB41-202ENST00000347529 GOLGA8HP0CJ92 632 aa9.42□□□□□ -0.9
EPB41-202ENST00000347529 HSPA6P17066 643 aa9.42□□□□□ -0.9
EPB41-202ENST00000347529 SLC9A1P19634 815 aa9.42□□□□□ -0.9
EPB41-202ENST00000347529 PEX19P40855 299 aa9.42□□□□□ -0.9
EPB41-202ENST00000347529 IFNAR2P48551 515 aa9.42□□□□□ -0.9
EPB41-202ENST00000347529 MAPK7Q13164 816 aa9.42□□□□□ -0.9
EPB41-202ENST00000347529 PRPF4BQ13523 1007 aaKnown RBP9.42□□□□□ -0.9
EPB41-202ENST00000347529 CNGA2Q16280 664 aa9.42□□□□□ -0.9
EPB41-202ENST00000347529 KCNK18Q7Z418 384 aa9.42□□□□□ -0.9
EPB41-202ENST00000347529 RUNDC3BQ96NL0 473 aa9.42□□□□□ -0.9
EPB41-202ENST00000347529 TMEM47Q9BQJ4 181 aa9.42□□□□□ -0.9
EPB41-202ENST00000347529 TRIM7Q9C029 511 aa9.42□□□□□ -0.9
EPB41-202ENST00000347529 TAOK3Q9H2K8 898 aa9.42□□□□□ -0.9
EPB41-202ENST00000347529 KCTD10Q9H3F6 313 aa9.42□□□□□ -0.9
EPB41-202ENST00000347529 CD2APQ9Y5K6 639 aa9.42□□□□□ -0.9
EPB41-202ENST00000347529 USP17L3A6NCW0 530 aa9.42□□□□□ -0.9
EPB41-202ENST00000347529 USP17L4A6NCW7 530 aa9.42□□□□□ -0.9
EPB41-202ENST00000347529 KIAA0391O15091 583 aaKnown RBP9.42□□□□□ -0.9
EPB41-202ENST00000347529 USP17L8P0C7I0 530 aa9.42□□□□□ -0.9
EPB41-202ENST00000347529 ACTN1P12814 892 aa9.42□□□□□ -0.9
EPB41-202ENST00000347529 XRCC5P13010 732 aaKnown RBP9.42□□□□□ -0.9
EPB41-202ENST00000347529 FERP16591 822 aa9.42□□□□□ -0.9
EPB41-202ENST00000347529 NR2F2P24468 414 aa9.42□□□□□ -0.9
EPB41-202ENST00000347529 PON1P27169 355 aa9.42□□□□□ -0.9
EPB41-202ENST00000347529 LMNB2Q03252 620 aa9.42□□□□□ -0.9
EPB41-202ENST00000347529 SF3A3Q12874 501 aaKnown RBP eCLIP9.42□□□□□ -0.93e-7■■■□□ 16.9
EPB41-202ENST00000347529 MKRN4PQ13434 485 aaPredicted RBP9.42□□□□□ -0.9
EPB41-202ENST00000347529 BIRC2Q13490 618 aa9.42□□□□□ -0.9
EPB41-202ENST00000347529 RBBP5Q15291 538 aaKnown RBP9.42□□□□□ -0.9
EPB41-202ENST00000347529 HERC4Q5GLZ8 1057 aaPredicted RBP9.42□□□□□ -0.9
EPB41-202ENST00000347529 ANKRD20A2Q5SQ80 823 aa9.42□□□□□ -0.9
EPB41-202ENST00000347529 ANKRD20A1Q5TYW2 823 aa9.42□□□□□ -0.9
EPB41-202ENST00000347529 ANKRD20A3Q5VUR7 823 aa9.42□□□□□ -0.9
EPB41-202ENST00000347529 USP17L1Q7RTZ2 530 aa9.42□□□□□ -0.9
EPB41-202ENST00000347529 JAMLQ86YT9 394 aa9.42□□□□□ -0.9
EPB41-202ENST00000347529 FBXO25Q8TCJ0 367 aa9.42□□□□□ -0.9
EPB41-202ENST00000347529 RFFLQ8WZ73 363 aa9.42□□□□□ -0.9
EPB41-202ENST00000347529 ROPN1BQ9BZX4 212 aaPredicted RBP9.42□□□□□ -0.9
EPB41-202ENST00000347529 CCDC113Q9H0I3 377 aa9.42□□□□□ -0.9
EPB41-202ENST00000347529 ROPN1Q9HAT0 212 aaPredicted RBP9.42□□□□□ -0.9
EPB41-202ENST00000347529 ZNF287Q9HBT7 754 aa9.42□□□□□ -0.9
EPB41-202ENST00000347529 RXFP1Q9HBX9 757 aa9.42□□□□□ -0.9
EPB41-202ENST00000347529 TBC1D7Q9P0N9 293 aa9.42□□□□□ -0.9
EPB41-202ENST00000347529 ARL2BPQ9Y2Y0 163 aa9.42□□□□□ -0.9
EPB41-202ENST00000347529 PHLPP1O60346 1717 aa9.42□□□□□ -0.9
EPB41-202ENST00000347529 SLC37A4O43826 429 aa9.41□□□□□ -0.9
EPB41-202ENST00000347529 WFS1O76024 890 aa9.41□□□□□ -0.9
EPB41-202ENST00000347529 KRT16P08779 473 aa9.41□□□□□ -0.9
EPB41-202ENST00000347529 ATP5DP30049 168 aa9.41□□□□□ -0.9
EPB41-202ENST00000347529 SKIV2L2P42285 1042 aaKnown RBP9.41□□□□□ -0.9
EPB41-202ENST00000347529 GALCP54803 685 aa9.41□□□□□ -0.9
EPB41-202ENST00000347529 TNFAIP8L3Q5GJ75 292 aa9.41□□□□□ -0.9
EPB41-202ENST00000347529 MFSD5Q6N075 450 aa9.41□□□□□ -0.9
EPB41-202ENST00000347529 TBC1D16Q8TBP0 767 aa9.41□□□□□ -0.9
EPB41-202ENST00000347529 U2AF1L4Q8WU68 220 aaKnown RBP9.41□□□□□ -0.9
EPB41-202ENST00000347529 SCFD1Q8WVM8 642 aa9.41□□□□□ -0.9
EPB41-202ENST00000347529 SLC4A9Q96Q91 983 aa9.41□□□□□ -0.9
EPB41-202ENST00000347529 RAB3IPQ96QF0 476 aaPredicted RBP9.41□□□□□ -0.9
EPB41-202ENST00000347529 NUDT12Q9BQG2 462 aa9.41□□□□□ -0.9
EPB41-202ENST00000347529 STK38LQ9Y2H1 464 aa9.41□□□□□ -0.9
EPB41-202ENST00000347529 SNX24Q9Y343 169 aa9.41□□□□□ -0.9
EPB41-202ENST00000347529 DCCP43146 1447 aa9.41□□□□□ -0.9
EPB41-202ENST00000347529 MAST2Q6P0Q8 1798 aa9.41□□□□□ -0.9
EPB41-202ENST00000347529 ROBO3Q96MS0 1386 aa9.41□□□□□ -0.9
EPB41-202ENST00000347529 KLHL33A6NCF5 533 aa9.41□□□□□ -0.9
EPB41-202ENST00000347529 MARCH6O60337 910 aa9.41□□□□□ -0.9
EPB41-202ENST00000347529 KRT13P13646 458 aa9.41□□□□□ -0.9
EPB41-202ENST00000347529 LMNB1P20700 586 aa9.41□□□□□ -0.9
EPB41-202ENST00000347529 CHRNA3P32297 505 aa9.41□□□□□ -0.9
EPB41-202ENST00000347529 MKRN3Q13064 507 aaKnown RBP9.41□□□□□ -0.9
EPB41-202ENST00000347529 DPY19L2P1Q6NXN4 242 aa9.41□□□□□ -0.9
EPB41-202ENST00000347529 ERICH1Q86X53 443 aa9.41□□□□□ -0.9
EPB41-202ENST00000347529 APLFQ8IW19 511 aaPredicted RBP9.41□□□□□ -0.9
EPB41-202ENST00000347529 SLC35G2Q8TBE7 412 aa9.41□□□□□ -0.9
EPB41-202ENST00000347529 RBM46Q8TBY0 533 aaKnown RBP9.41□□□□□ -0.9
EPB41-202ENST00000347529 CTNNBL1Q8WYA6 563 aaPredicted RBP9.41□□□□□ -0.9
EPB41-202ENST00000347529 MTFR1LQ9H019 292 aa9.41□□□□□ -0.9
EPB41-202ENST00000347529 SEMA4AQ9H3S1 761 aa9.41□□□□□ -0.9
EPB41-202ENST00000347529 BSDC1Q9NW68 430 aaPredicted RBP9.41□□□□□ -0.9
EPB41-202ENST00000347529 NR2E1Q9Y466 385 aa9.41□□□□□ -0.9
EPB41-202ENST00000347529 PCDHA2Q9Y5H9 948 aa9.41□□□□□ -0.9
EPB41-202ENST00000347529 NCANO14594 1321 aa9.41□□□□□ -0.9
EPB41-202ENST00000347529 RPTORQ8N122 1335 aa9.41□□□□□ -0.9
EPB41-202ENST00000347529 TULP1O00294 542 aaPredicted RBP9.4□□□□□ -0.9
EPB41-202ENST00000347529 DDX3XO00571 662 aaKnown RBP eCLIP9.4□□□□□ -0.92e-6■■■■□ 19.3
EPB41-202ENST00000347529 DDX3YO15523 660 aaKnown RBP9.4□□□□□ -0.9
EPB41-202ENST00000347529 HIP1RO75146 1068 aa9.4□□□□□ -0.9
EPB41-202ENST00000347529 GJB6O95452 261 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms