RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 OATP04181 439 aa23.66■■□□□ 1.38
TSPAN3-202ENST00000346495 SREBF2Q12772 1141 aa23.66■■□□□ 1.38
TSPAN3-202ENST00000346495 DHX37Q8IY37 1157 aaKnown RBP23.66■■□□□ 1.38
TSPAN3-202ENST00000346495 AFAP1L1Q8TED9 768 aa23.66■■□□□ 1.38
TSPAN3-202ENST00000346495 NOC4LQ9BVI4 516 aaKnown RBP23.66■■□□□ 1.38
TSPAN3-202ENST00000346495 CYP26B1Q9NR63 512 aa23.66■■□□□ 1.38
TSPAN3-202ENST00000346495 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.66■■□□□ 1.38
TSPAN3-202ENST00000346495 FAM155AB1AL88 458 aaPredicted RBP23.66■■□□□ 1.38
TSPAN3-202ENST00000346495 PES1O00541 588 aaKnown RBP23.66■■□□□ 1.38
TSPAN3-202ENST00000346495 ZNF500O60304 480 aaPredicted RBP23.66■■□□□ 1.38
TSPAN3-202ENST00000346495 TXNP10599 105 aaKnown RBP23.66■■□□□ 1.38
TSPAN3-202ENST00000346495 MAN2A1Q16706 1144 aa23.66■■□□□ 1.38
TSPAN3-202ENST00000346495 FAM102BQ5T8I3 360 aa23.66■■□□□ 1.38
TSPAN3-202ENST00000346495 MAMDC4Q6UXC1 1216 aa23.66■■□□□ 1.38
TSPAN3-202ENST00000346495 SLC17A8Q8NDX2 589 aa23.66■■□□□ 1.38
TSPAN3-202ENST00000346495 MCPH1Q8NEM0 835 aa23.66■■□□□ 1.38
TSPAN3-202ENST00000346495 KIFAP3Q92845 792 aa23.66■■□□□ 1.38
TSPAN3-202ENST00000346495 STRA6Q9BX79 667 aa23.66■■□□□ 1.38
TSPAN3-202ENST00000346495 SLC5A4Q9NY91 659 aa23.66■■□□□ 1.38
TSPAN3-202ENST00000346495 ABT1Q9ULW3 272 aaKnown RBP23.66■■□□□ 1.38
TSPAN3-202ENST00000346495 PYCARDQ9ULZ3 195 aa23.66■■□□□ 1.38
TSPAN3-202ENST00000346495 A0A1W2PQC6 194 aa23.65■■□□□ 1.38
TSPAN3-202ENST00000346495 K7ENM7 598 aa23.65■■□□□ 1.38
TSPAN3-202ENST00000346495 NOP56O00567 594 aaKnown RBP23.65■■□□□ 1.38
TSPAN3-202ENST00000346495 PPP1R37O75864 691 aa23.65■■□□□ 1.38
TSPAN3-202ENST00000346495 ATP4AP20648 1035 aa23.65■■□□□ 1.38
TSPAN3-202ENST00000346495 RPL13P26373 211 aaKnown RBP23.65■■□□□ 1.38
TSPAN3-202ENST00000346495 TCF7P36402 384 aaPredicted RBP23.65■■□□□ 1.38
TSPAN3-202ENST00000346495 STAT5BP51692 787 aa23.65■■□□□ 1.38
TSPAN3-202ENST00000346495 ADAM9Q13443 819 aa23.65■■□□□ 1.38
TSPAN3-202ENST00000346495 ZC2HC1CQ53FD0 456 aaPredicted RBP23.65■■□□□ 1.38
TSPAN3-202ENST00000346495 PPFIBP1Q86W92 1011 aa23.65■■□□□ 1.38
TSPAN3-202ENST00000346495 HHIPL1Q96JK4 782 aa23.65■■□□□ 1.38
TSPAN3-202ENST00000346495 PCYT2Q99447 389 aa23.65■■□□□ 1.38
TSPAN3-202ENST00000346495 GPR20Q99678 358 aa23.65■■□□□ 1.38
TSPAN3-202ENST00000346495 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.65■■□□□ 1.38
TSPAN3-202ENST00000346495 NR2F2P24468 414 aa23.64■■□□□ 1.38
TSPAN3-202ENST00000346495 MARSP56192 900 aaKnown RBP23.64■■□□□ 1.38
TSPAN3-202ENST00000346495 CCZ1BP86790 482 aa23.64■■□□□ 1.38
TSPAN3-202ENST00000346495 CCZ1P86791 482 aaPredicted RBP23.64■■□□□ 1.38
TSPAN3-202ENST00000346495 TRIM14Q14142 442 aa23.64■■□□□ 1.38
TSPAN3-202ENST00000346495 NFIL3Q16649 462 aa23.64■■□□□ 1.38
TSPAN3-202ENST00000346495 CCDC40Q4G0X9 1142 aa23.64■■□□□ 1.38
TSPAN3-202ENST00000346495 MIIPQ5JXC2 388 aa23.64■■□□□ 1.38
TSPAN3-202ENST00000346495 KIAA1524Q8TCG1 905 aa23.64■■□□□ 1.38
TSPAN3-202ENST00000346495 MAML3Q96JK9 1138 aa23.64■■□□□ 1.38
TSPAN3-202ENST00000346495 NIFKQ9BYG3 293 aaKnown RBP23.64■■□□□ 1.38
TSPAN3-202ENST00000346495 ST6GALNAC4Q9H4F1 302 aa23.64■■□□□ 1.38
TSPAN3-202ENST00000346495 AZI2Q9H6S1 392 aa23.64■■□□□ 1.38
TSPAN3-202ENST00000346495 C17orf75Q9HAS0 396 aa23.64■■□□□ 1.38
TSPAN3-202ENST00000346495 ATP6V0A4Q9HBG4 840 aa23.64■■□□□ 1.38
TSPAN3-202ENST00000346495 PDLIM7Q9NR12 457 aa23.64■■□□□ 1.38
TSPAN3-202ENST00000346495 PDGFCQ9NRA1 345 aa23.64■■□□□ 1.38
TSPAN3-202ENST00000346495 NRBP2Q9NSY0 501 aa23.64■■□□□ 1.38
TSPAN3-202ENST00000346495 RBM47A0AV96 593 aaKnown RBP23.63■■□□□ 1.37
TSPAN3-202ENST00000346495 TPM1P09493 284 aa23.63■■□□□ 1.37
TSPAN3-202ENST00000346495 SKILP12757 684 aa23.63■■□□□ 1.37
TSPAN3-202ENST00000346495 MTERF2Q49AM1 385 aa23.63■■□□□ 1.37
TSPAN3-202ENST00000346495 VWA3BQ502W6 1294 aa23.63■■□□□ 1.37
TSPAN3-202ENST00000346495 FKBP15Q5T1M5 1219 aa23.63■■□□□ 1.37
TSPAN3-202ENST00000346495 TAPT1Q6NXT6 567 aa23.63■■□□□ 1.37
TSPAN3-202ENST00000346495 CCDC112Q8NEF3 446 aa23.63■■□□□ 1.37
TSPAN3-202ENST00000346495 SPATA33Q96N06 139 aa23.63■■□□□ 1.37
TSPAN3-202ENST00000346495 ZFYVE28Q9HCC9 887 aa23.63■■□□□ 1.37
TSPAN3-202ENST00000346495 GPRC5CQ9NQ84 441 aa23.63■■□□□ 1.37
TSPAN3-202ENST00000346495 ZMYM2Q9UBW7 1377 aa23.63■■□□□ 1.37
TSPAN3-202ENST00000346495 TMEM88BA6NKF7 163 aa23.62■■□□□ 1.37
TSPAN3-202ENST00000346495 TLR2O60603 784 aa23.62■■□□□ 1.37
TSPAN3-202ENST00000346495 LGR5O75473 907 aa23.62■■□□□ 1.37
TSPAN3-202ENST00000346495 NR3C1P04150 777 aa23.62■■□□□ 1.37
TSPAN3-202ENST00000346495 KCNA1Q09470 495 aa23.62■■□□□ 1.37
TSPAN3-202ENST00000346495 TBC1D8BQ0IIM8 1120 aa23.62■■□□□ 1.37
TSPAN3-202ENST00000346495 C17orf99Q6UX52 265 aa23.62■■□□□ 1.37
TSPAN3-202ENST00000346495 GOLGA5Q8TBA6 731 aa23.62■■□□□ 1.37
TSPAN3-202ENST00000346495 FAM167AQ96KS9 214 aa23.62■■□□□ 1.37
TSPAN3-202ENST00000346495 AKR1B15C9JRZ8 316 aaPredicted RBP23.62■■□□□ 1.37
TSPAN3-202ENST00000346495 TGFB1I1O43294 461 aa23.62■■□□□ 1.37
TSPAN3-202ENST00000346495 SMTNP53814 917 aa23.62■■□□□ 1.37
TSPAN3-202ENST00000346495 NCKAP1LP55160 1127 aa23.62■■□□□ 1.37
TSPAN3-202ENST00000346495 PEX3P56589 373 aa23.62■■□□□ 1.37
TSPAN3-202ENST00000346495 RTP1P59025 263 aa23.62■■□□□ 1.37
TSPAN3-202ENST00000346495 HSDL1Q3SXM5 330 aa23.62■■□□□ 1.37
TSPAN3-202ENST00000346495 HS2ST1Q7LGA3 356 aa23.62■■□□□ 1.37
TSPAN3-202ENST00000346495 MSL3Q8N5Y2 521 aaKnown RBP23.62■■□□□ 1.37
TSPAN3-202ENST00000346495 TMEM206Q9H813 350 aa23.62■■□□□ 1.37
TSPAN3-202ENST00000346495 PPME1Q9Y570 386 aa23.62■■□□□ 1.37
TSPAN3-202ENST00000346495 DMP1Q13316 513 aaPredicted RBP23.61■■□□□ 1.37
TSPAN3-202ENST00000346495 PLPPR4Q7Z2D5 763 aa23.61■■□□□ 1.37
TSPAN3-202ENST00000346495 EMSYQ7Z589 1322 aa23.61■■□□□ 1.37
TSPAN3-202ENST00000346495 COPS5Q92905 334 aa23.61■■□□□ 1.37
TSPAN3-202ENST00000346495 ACCSQ96QU6 501 aa23.61■■□□□ 1.37
TSPAN3-202ENST00000346495 KATNBL1Q9H079 304 aa23.61■■□□□ 1.37
TSPAN3-202ENST00000346495 GBP3Q9H0R5 595 aa23.61■■□□□ 1.37
TSPAN3-202ENST00000346495 NDST4Q9H3R1 872 aa23.61■■□□□ 1.37
TSPAN3-202ENST00000346495 SLC16A3O15427 465 aaKnown RBP23.6■■□□□ 1.37
TSPAN3-202ENST00000346495 SNAI1O95863 264 aaPredicted RBP23.6■■□□□ 1.37
TSPAN3-202ENST00000346495 POLGP54098 1239 aaPredicted RBP23.6■■□□□ 1.37
TSPAN3-202ENST00000346495 GTF2BQ00403 316 aa23.6■■□□□ 1.37
TSPAN3-202ENST00000346495 RBL2Q08999 1139 aa23.6■■□□□ 1.37
TSPAN3-202ENST00000346495 LAMC2Q13753 1193 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms