RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 PPP4R3CPQ6ZMV5 832 aa12.94□□□□□ -0.34
COL12A1-202ENST00000345356 ARHGAP22Q7Z5H3 698 aa12.94□□□□□ -0.34
COL12A1-202ENST00000345356 CDAN1Q8IWY9 1227 aa12.94□□□□□ -0.34
COL12A1-202ENST00000345356 MIEF2Q96C03 454 aa12.94□□□□□ -0.34
COL12A1-202ENST00000345356 ACSBG1Q96GR2 724 aa12.94□□□□□ -0.34
COL12A1-202ENST00000345356 SNF8Q96H20 258 aa12.94□□□□□ -0.34
COL12A1-202ENST00000345356 CARD9Q9H257 536 aa12.94□□□□□ -0.34
COL12A1-202ENST00000345356 PCIF1Q9H4Z3 704 aa12.94□□□□□ -0.34
COL12A1-202ENST00000345356 ALG13Q9NP73 1137 aaKnown RBP12.94□□□□□ -0.34
COL12A1-202ENST00000345356 DNAJC12Q9UKB3 198 aa12.94□□□□□ -0.34
COL12A1-202ENST00000345356 PRKAB2O43741 272 aa12.94□□□□□ -0.34
COL12A1-202ENST00000345356 CIAO1O76071 339 aa12.94□□□□□ -0.34
COL12A1-202ENST00000345356 PDE5AO76074 875 aa12.94□□□□□ -0.34
COL12A1-202ENST00000345356 S100BP04271 92 aaPredicted RBP12.94□□□□□ -0.34
COL12A1-202ENST00000345356 GABPAQ06546 454 aa12.94□□□□□ -0.34
COL12A1-202ENST00000345356 TCIRG1Q13488 830 aa12.94□□□□□ -0.34
COL12A1-202ENST00000345356 CDC37Q16543 378 aaPredicted RBP12.94□□□□□ -0.34
COL12A1-202ENST00000345356 PARP10Q53GL7 1025 aa12.94□□□□□ -0.34
COL12A1-202ENST00000345356 KIAA1755Q5JYT7 1200 aa12.94□□□□□ -0.34
COL12A1-202ENST00000345356 LRRC47Q8N1G4 583 aaKnown RBP12.94□□□□□ -0.34
COL12A1-202ENST00000345356 JDP2Q8WYK2 163 aa12.94□□□□□ -0.34
COL12A1-202ENST00000345356 BTBD6Q96KE9 485 aa12.94□□□□□ -0.34
COL12A1-202ENST00000345356 MOV10L1Q9BXT6 1211 aaKnown RBP12.94□□□□□ -0.34
COL12A1-202ENST00000345356 FAM96AQ9H5X1 160 aa12.94□□□□□ -0.34
COL12A1-202ENST00000345356 SNX5Q9Y5X3 404 aa12.94□□□□□ -0.34
COL12A1-202ENST00000345356 PCDH11XQ9BZA7 1347 aa12.94□□□□□ -0.34
COL12A1-202ENST00000345356 PCDH11YQ9BZA8 1340 aa12.94□□□□□ -0.34
COL12A1-202ENST00000345356 AP1G2O75843 785 aa12.94□□□□□ -0.34
COL12A1-202ENST00000345356 KCNA4P22459 653 aa12.94□□□□□ -0.34
COL12A1-202ENST00000345356 TRPC1P48995 793 aa12.94□□□□□ -0.34
COL12A1-202ENST00000345356 ARHGAP31Q2M1Z3 1444 aa12.94□□□□□ -0.34
COL12A1-202ENST00000345356 STK36Q9NRP7 1315 aa12.94□□□□□ -0.34
COL12A1-202ENST00000345356 SYCE1LA8MT33 242 aa12.94□□□□□ -0.34
COL12A1-202ENST00000345356 PLA2G4BP0C869 781 aa12.94□□□□□ -0.34
COL12A1-202ENST00000345356 DDX42Q86XP3 938 aaKnown RBP eCLIP12.94□□□□□ -0.34
COL12A1-202ENST00000345356 TRIM59Q8IWR1 403 aa12.94□□□□□ -0.34
COL12A1-202ENST00000345356 HOMEZQ8IX15 550 aa12.94□□□□□ -0.34
COL12A1-202ENST00000345356 CATSPER1Q8NEC5 780 aa12.94□□□□□ -0.34
COL12A1-202ENST00000345356 CALN1Q9BXU9 219 aa12.94□□□□□ -0.34
COL12A1-202ENST00000345356 GSTA4O15217 222 aa12.93□□□□□ -0.34
COL12A1-202ENST00000345356 CCDC159P0C7I6 412 aa12.93□□□□□ -0.34
COL12A1-202ENST00000345356 RCSD1Q6JBY9 416 aa12.93□□□□□ -0.34
COL12A1-202ENST00000345356 POMGNT1Q8WZA1 660 aa12.93□□□□□ -0.34
COL12A1-202ENST00000345356 ANKFY1Q9P2R3 1169 aa12.93□□□□□ -0.34
COL12A1-202ENST00000345356 TMEM120BA0PK00 339 aa12.93□□□□□ -0.34
COL12A1-202ENST00000345356 MEIS1O00470 390 aa12.93□□□□□ -0.34
COL12A1-202ENST00000345356 HDAC4P56524 1084 aa12.93□□□□□ -0.34
COL12A1-202ENST00000345356 GPC5P78333 572 aa12.93□□□□□ -0.34
COL12A1-202ENST00000345356 KPNB1Q14974 876 aaKnown RBP12.93□□□□□ -0.34
COL12A1-202ENST00000345356 TEDDM1Q5T9Z0 273 aa12.93□□□□□ -0.34
COL12A1-202ENST00000345356 PROM2Q8N271 834 aa12.93□□□□□ -0.34
COL12A1-202ENST00000345356 TRABDQ9H4I3 376 aa12.93□□□□□ -0.34
COL12A1-202ENST00000345356 AGPAT5Q9NUQ2 364 aa12.93□□□□□ -0.34
COL12A1-202ENST00000345356 DENND4BO75064 1496 aaPredicted RBP12.93□□□□□ -0.34
COL12A1-202ENST00000345356 POGZQ7Z3K3 1410 aa12.93□□□□□ -0.34
COL12A1-202ENST00000345356 DAB1O75553 588 aa12.93□□□□□ -0.34
COL12A1-202ENST00000345356 HSD17B3P37058 310 aa12.93□□□□□ -0.34
COL12A1-202ENST00000345356 DNAJC24Q6P3W2 148 aa12.93□□□□□ -0.34
COL12A1-202ENST00000345356 ZKSCAN4Q969J2 545 aaPredicted RBP12.93□□□□□ -0.34
COL12A1-202ENST00000345356 ANAPC7Q9UJX3 599 aa12.93□□□□□ -0.34
COL12A1-202ENST00000345356 PLEKHA8P1O95397 391 aa12.93□□□□□ -0.34
COL12A1-202ENST00000345356 PTPN12Q05209 780 aaKnown RBP12.93□□□□□ -0.34
COL12A1-202ENST00000345356 TRIP10Q15642 601 aa12.93□□□□□ -0.34
COL12A1-202ENST00000345356 DEPTORQ8TB45 409 aa12.93□□□□□ -0.34
COL12A1-202ENST00000345356 WWP1Q9H0M0 922 aa12.93□□□□□ -0.34
COL12A1-202ENST00000345356 ISCUQ9H1K1 167 aa12.93□□□□□ -0.34
COL12A1-202ENST00000345356 KDM4CQ9H3R0 1056 aa12.93□□□□□ -0.34
COL12A1-202ENST00000345356 ABCC10Q5T3U5 1492 aa12.93□□□□□ -0.34
COL12A1-202ENST00000345356 P4HA1P13674 534 aa12.93□□□□□ -0.34
COL12A1-202ENST00000345356 PPM1FP49593 454 aaPredicted RBP12.93□□□□□ -0.34
COL12A1-202ENST00000345356 KCNH2Q12809 1159 aa12.93□□□□□ -0.34
COL12A1-202ENST00000345356 ITIH4Q14624 930 aa12.93□□□□□ -0.34
COL12A1-202ENST00000345356 ZCWPW2Q504Y3 356 aa12.93□□□□□ -0.34
COL12A1-202ENST00000345356 CEP55Q53EZ4 464 aa12.93□□□□□ -0.34
COL12A1-202ENST00000345356 CCDC90BQ9GZT6 254 aa12.93□□□□□ -0.34
COL12A1-202ENST00000345356 ARHGEF10LQ9HCE6 1279 aa12.93□□□□□ -0.34
COL12A1-202ENST00000345356 ADA2Q9NZK5 511 aa12.93□□□□□ -0.34
COL12A1-202ENST00000345356 MID2Q9UJV3 735 aa12.93□□□□□ -0.34
COL12A1-202ENST00000345356 TFR2Q9UP52 801 aa12.93□□□□□ -0.34
COL12A1-202ENST00000345356 CAND2O75155 1236 aa12.92□□□□□ -0.34
COL12A1-202ENST00000345356 KRT38O76015 456 aa12.92□□□□□ -0.34
COL12A1-202ENST00000345356 TJP3O95049 919 aa12.92□□□□□ -0.34
COL12A1-202ENST00000345356 ZCCHC18P0CG32 403 aa12.92□□□□□ -0.34
COL12A1-202ENST00000345356 SKOR1P84550 965 aa12.92□□□□□ -0.34
COL12A1-202ENST00000345356 STAT4Q14765 748 aa12.92□□□□□ -0.34
COL12A1-202ENST00000345356 XKR9Q5GH70 373 aa12.92□□□□□ -0.34
COL12A1-202ENST00000345356 TRAPPC11Q7Z392 1133 aa12.92□□□□□ -0.34
COL12A1-202ENST00000345356 GYG1P46976 350 aa12.92□□□□□ -0.34
COL12A1-202ENST00000345356 ALDH18A1P54886 795 aaKnown RBP12.92□□□□□ -0.34
COL12A1-202ENST00000345356 OCRLQ01968 901 aa12.92□□□□□ -0.34
COL12A1-202ENST00000345356 RCN1Q15293 331 aa12.92□□□□□ -0.34
COL12A1-202ENST00000345356 ZYXQ15942 572 aaKnown RBP12.92□□□□□ -0.34
COL12A1-202ENST00000345356 ZBED8Q8IZ13 594 aa12.92□□□□□ -0.34
COL12A1-202ENST00000345356 KCTD6Q8NC69 237 aa12.92□□□□□ -0.34
COL12A1-202ENST00000345356 CABLES1Q8TDN4 633 aa12.92□□□□□ -0.34
COL12A1-202ENST00000345356 STX18Q9P2W9 335 aaKnown RBP12.92□□□□□ -0.34
COL12A1-202ENST00000345356 A6NJR5 290 aa12.92□□□□□ -0.34
COL12A1-202ENST00000345356 POLD1P28340 1107 aa12.92□□□□□ -0.34
COL12A1-202ENST00000345356 MXI1P50539 228 aa12.92□□□□□ -0.34
COL12A1-202ENST00000345356 PMS1P54277 932 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms