RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 KRI1Q8N9T8 703 aaKnown RBP23.22■■□□□ 1.31
SMARCB1-202ENST00000344921 CEP89Q96ST8 783 aa23.22■■□□□ 1.31
SMARCB1-202ENST00000344921 MMTAG2Q9BU76 263 aaKnown RBP23.22■■□□□ 1.31
SMARCB1-202ENST00000344921 CSRNP2Q9H175 543 aa23.22■■□□□ 1.31
SMARCB1-202ENST00000344921 CDY2AQ9Y6F7 541 aa23.22■■□□□ 1.31
SMARCB1-202ENST00000344921 KDM3AQ9Y4C1 1321 aa23.21■■□□□ 1.31
SMARCB1-202ENST00000344921 SCN5AQ14524 2016 aa23.21■■□□□ 1.31
SMARCB1-202ENST00000344921 YEATS4O95619 227 aa23.21■■□□□ 1.31
SMARCB1-202ENST00000344921 VTNP04004 478 aa23.21■■□□□ 1.31
SMARCB1-202ENST00000344921 RFC5P40937 340 aa23.21■■□□□ 1.31
SMARCB1-202ENST00000344921 RARRES1P49788 294 aa23.21■■□□□ 1.31
SMARCB1-202ENST00000344921 SPECC1Q5M775 1068 aa23.21■■□□□ 1.31
SMARCB1-202ENST00000344921 CLIC6Q96NY7 704 aa23.21■■□□□ 1.31
SMARCB1-202ENST00000344921 PPP1R16BQ96T49 567 aa23.21■■□□□ 1.31
SMARCB1-202ENST00000344921 CHRNA1P02708 482 aa23.2■■□□□ 1.3
SMARCB1-202ENST00000344921 BMP8BP34820 402 aa23.2■■□□□ 1.3
SMARCB1-202ENST00000344921 EPHB4P54760 987 aa23.2■■□□□ 1.3
SMARCB1-202ENST00000344921 TRAF7Q6Q0C0 670 aa23.2■■□□□ 1.3
SMARCB1-202ENST00000344921 CALML4Q96GE6 196 aa23.2■■□□□ 1.3
SMARCB1-202ENST00000344921 PLIN2Q99541 437 aa23.2■■□□□ 1.3
SMARCB1-202ENST00000344921 NT5C3AQ9H0P0 336 aa23.2■■□□□ 1.3
SMARCB1-202ENST00000344921 DNM3Q9UQ16 869 aa23.2■■□□□ 1.3
SMARCB1-202ENST00000344921 COLQQ9Y215 455 aaPredicted RBP23.2■■□□□ 1.3
SMARCB1-202ENST00000344921 RBM19Q9Y4C8 960 aaKnown RBP23.2■■□□□ 1.3
SMARCB1-202ENST00000344921 FAM26DQ5JW98 314 aa23.19■■□□□ 1.3
SMARCB1-202ENST00000344921 DHX33Q9H6R0 707 aaKnown RBP23.19■■□□□ 1.3
SMARCB1-202ENST00000344921 DBR1Q9UK59 544 aaKnown RBP23.19■■□□□ 1.3
SMARCB1-202ENST00000344921 TRPV2Q9Y5S1 764 aa23.19■■□□□ 1.3
SMARCB1-202ENST00000344921 ARHGEF35A5YM69 484 aa23.19■■□□□ 1.3
SMARCB1-202ENST00000344921 NBNO60934 754 aa23.19■■□□□ 1.3
SMARCB1-202ENST00000344921 PPP6R2O75170 966 aa23.19■■□□□ 1.3
SMARCB1-202ENST00000344921 DGAT1O75907 488 aa23.19■■□□□ 1.3
SMARCB1-202ENST00000344921 FGBP02675 491 aa23.19■■□□□ 1.3
SMARCB1-202ENST00000344921 PFKMP08237 780 aa23.19■■□□□ 1.3
SMARCB1-202ENST00000344921 KRT85P78386 507 aa23.19■■□□□ 1.3
SMARCB1-202ENST00000344921 MBTPS1Q14703 1052 aa23.19■■□□□ 1.3
SMARCB1-202ENST00000344921 EMC2Q15006 297 aa23.19■■□□□ 1.3
SMARCB1-202ENST00000344921 PSRC1Q6PGN9 363 aaPredicted RBP23.19■■□□□ 1.3
SMARCB1-202ENST00000344921 ZNF365Q70YC5 407 aa23.19■■□□□ 1.3
SMARCB1-202ENST00000344921 SCLT1Q96NL6 688 aa23.19■■□□□ 1.3
SMARCB1-202ENST00000344921 MTRQ99707 1265 aa23.19■■□□□ 1.3
SMARCB1-202ENST00000344921 CELF4Q9BZC1 486 aaKnown RBP23.19■■□□□ 1.3
SMARCB1-202ENST00000344921 BHMT2Q9H2M3 363 aa23.19■■□□□ 1.3
SMARCB1-202ENST00000344921 MORC2Q9Y6X9 1032 aaPredicted RBP23.19■■□□□ 1.3
SMARCB1-202ENST00000344921 ARID2Q68CP9 1835 aa23.19■■□□□ 1.3
SMARCB1-202ENST00000344921 IGKV6-21A0A0C4DH24 114 aa23.18■■□□□ 1.3
SMARCB1-202ENST00000344921 E9PMD0 336 aa23.18■■□□□ 1.3
SMARCB1-202ENST00000344921 USO1O60763 962 aaKnown RBP23.18■■□□□ 1.3
SMARCB1-202ENST00000344921 DDIT3P35638 169 aa23.18■■□□□ 1.3
SMARCB1-202ENST00000344921 DRP2Q13474 957 aa23.18■■□□□ 1.3
SMARCB1-202ENST00000344921 KIZQ2M2Z5 673 aa23.18■■□□□ 1.3
SMARCB1-202ENST00000344921 C16orf59Q7L2K0 433 aa23.18■■□□□ 1.3
SMARCB1-202ENST00000344921 LINC01465Q8N7H1 131 aa23.18■■□□□ 1.3
SMARCB1-202ENST00000344921 KCNG4Q8TDN1 519 aa23.18■■□□□ 1.3
SMARCB1-202ENST00000344921 EPSTI1Q96J88 318 aa23.18■■□□□ 1.3
SMARCB1-202ENST00000344921 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.18■■□□□ 1.3
SMARCB1-202ENST00000344921 ATP6V0A4Q9HBG4 840 aa23.18■■□□□ 1.3
SMARCB1-202ENST00000344921 TSHZ2Q9NRE2 1034 aa23.18■■□□□ 1.3
SMARCB1-202ENST00000344921 SUCLA2Q9P2R7 463 aaPredicted RBP23.18■■□□□ 1.3
SMARCB1-202ENST00000344921 TXLNAP40222 546 aa23.17■■□□□ 1.3
SMARCB1-202ENST00000344921 ME1P48163 572 aa23.17■■□□□ 1.3
SMARCB1-202ENST00000344921 NLRP11P59045 1033 aaKnown RBP23.17■■□□□ 1.3
SMARCB1-202ENST00000344921 MGAT3Q09327 533 aa23.17■■□□□ 1.3
SMARCB1-202ENST00000344921 OTOP2Q7RTS6 562 aa23.17■■□□□ 1.3
SMARCB1-202ENST00000344921 TMEM143Q96AN5 459 aa23.17■■□□□ 1.3
SMARCB1-202ENST00000344921 GAS2O43903 313 aaKnown RBP23.16■■□□□ 1.3
SMARCB1-202ENST00000344921 GHRP10912 638 aa23.16■■□□□ 1.3
SMARCB1-202ENST00000344921 ACTN1P12814 892 aa23.16■■□□□ 1.3
SMARCB1-202ENST00000344921 MKRN4PQ13434 485 aaPredicted RBP23.16■■□□□ 1.3
SMARCB1-202ENST00000344921 GPNMBQ14956 572 aa23.16■■□□□ 1.3
SMARCB1-202ENST00000344921 KARSQ15046 597 aaKnown RBP23.16■■□□□ 1.3
SMARCB1-202ENST00000344921 SHHQ15465 462 aa23.16■■□□□ 1.3
SMARCB1-202ENST00000344921 TMEM240Q5SV17 173 aa23.16■■□□□ 1.3
SMARCB1-202ENST00000344921 C9orf50Q5SZB4 431 aa23.16■■□□□ 1.3
SMARCB1-202ENST00000344921 MAEAQ7L5Y9 396 aa23.16■■□□□ 1.3
SMARCB1-202ENST00000344921 RHPN2Q8IUC4 686 aa23.16■■□□□ 1.3
SMARCB1-202ENST00000344921 TDHQ8IZJ6 230 aa23.16■■□□□ 1.3
SMARCB1-202ENST00000344921 TCP11Q8WWU5 503 aa23.16■■□□□ 1.3
SMARCB1-202ENST00000344921 SYMPKQ92797 1274 aaKnown RBP23.16■■□□□ 1.3
SMARCB1-202ENST00000344921 CHAMP1Q96JM3 812 aa23.16■■□□□ 1.3
SMARCB1-202ENST00000344921 ZNF668Q96K58 619 aaPredicted RBP23.16■■□□□ 1.3
SMARCB1-202ENST00000344921 PNMA5Q96PV4 448 aa23.16■■□□□ 1.3
SMARCB1-202ENST00000344921 GRB10Q13322 594 aa23.16■■□□□ 1.3
SMARCB1-202ENST00000344921 HYIQ5T013 277 aa23.16■■□□□ 1.3
SMARCB1-202ENST00000344921 PADI6Q6TGC4 694 aa23.16■■□□□ 1.3
SMARCB1-202ENST00000344921 NLRP7Q8WX94 980 aa23.16■■□□□ 1.3
SMARCB1-202ENST00000344921 CCDC39Q9UFE4 941 aa23.16■■□□□ 1.3
SMARCB1-202ENST00000344921 SLC26A4O43511 780 aa23.15■■□□□ 1.3
SMARCB1-202ENST00000344921 EYA4O95677 639 aa23.15■■□□□ 1.3
SMARCB1-202ENST00000344921 CXCL10P02778 98 aa23.15■■□□□ 1.3
SMARCB1-202ENST00000344921 SSBP05455 408 aaKnown RBP eCLIP23.15■■□□□ 1.3
SMARCB1-202ENST00000344921 CDC42EP1Q00587 391 aa23.15■■□□□ 1.3
SMARCB1-202ENST00000344921 FBXO47Q5MNV8 452 aa23.15■■□□□ 1.3
SMARCB1-202ENST00000344921 USP49Q70CQ1 688 aa23.15■■□□□ 1.3
SMARCB1-202ENST00000344921 ZNF710Q8N1W2 664 aa23.15■■□□□ 1.3
SMARCB1-202ENST00000344921 KCTD17Q8N5Z5 321 aa23.15■■□□□ 1.3
SMARCB1-202ENST00000344921 PSPC1Q8WXF1 523 aaKnown RBP23.15■■□□□ 1.3
SMARCB1-202ENST00000344921 SPATA32Q96LK8 384 aa23.15■■□□□ 1.3
SMARCB1-202ENST00000344921 RNPC3Q96LT9 517 aaKnown RBP23.15■■□□□ 1.3
SMARCB1-202ENST00000344921 OSMRQ99650 979 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms