RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 KRT83P78385 493 aa20.41■□□□□ 0.86
HOXA9-201ENST00000343483 CDK17Q00537 523 aa20.41■□□□□ 0.86
HOXA9-201ENST00000343483 CHADLQ6NUI6 762 aa20.41■□□□□ 0.86
HOXA9-201ENST00000343483 C4orf19Q8IY42 314 aa20.41■□□□□ 0.86
HOXA9-201ENST00000343483 ANKRD35Q8N283 1001 aa20.41■□□□□ 0.86
HOXA9-201ENST00000343483 BAP1Q92560 729 aa20.41■□□□□ 0.86
HOXA9-201ENST00000343483 CCDC42Q96M95 316 aa20.41■□□□□ 0.86
HOXA9-201ENST00000343483 NLRC4Q9NPP4 1024 aa20.41■□□□□ 0.86
HOXA9-201ENST00000343483 CDC23Q9UJX2 597 aa20.41■□□□□ 0.86
HOXA9-201ENST00000343483 UBE4BO95155 1302 aa20.41■□□□□ 0.86
HOXA9-201ENST00000343483 K7ENM7 598 aa20.41■□□□□ 0.86
HOXA9-201ENST00000343483 BACH1O14867 736 aa20.41■□□□□ 0.86
HOXA9-201ENST00000343483 PLEKP08567 350 aaPredicted RBP20.41■□□□□ 0.86
HOXA9-201ENST00000343483 HNRNPH3P31942 346 aaKnown RBP20.41■□□□□ 0.86
HOXA9-201ENST00000343483 NF2P35240 595 aa20.41■□□□□ 0.86
HOXA9-201ENST00000343483 HERVK_113P62684 666 aa20.41■□□□□ 0.86
HOXA9-201ENST00000343483 TCERG1LQ5VWI1 586 aa20.41■□□□□ 0.86
HOXA9-201ENST00000343483 ZNF746Q6NUN9 644 aaPredicted RBP20.41■□□□□ 0.86
HOXA9-201ENST00000343483 LBX2Q6XYB7 198 aa20.41■□□□□ 0.86
HOXA9-201ENST00000343483 HS2ST1Q7LGA3 356 aa20.41■□□□□ 0.86
HOXA9-201ENST00000343483 GOLGA1Q92805 767 aa20.41■□□□□ 0.86
HOXA9-201ENST00000343483 CDCA5Q96FF9 252 aa20.41■□□□□ 0.86
HOXA9-201ENST00000343483 NAPGQ99747 312 aaPredicted RBP20.41■□□□□ 0.86
HOXA9-201ENST00000343483 MOV10L1Q9BXT6 1211 aaKnown RBP20.41■□□□□ 0.86
HOXA9-201ENST00000343483 LARSQ9P2J5 1176 aaKnown RBP20.41■□□□□ 0.86
HOXA9-201ENST00000343483 KCNA2P16389 499 aa20.4■□□□□ 0.86
HOXA9-201ENST00000343483 HTRA3P83110 453 aa20.4■□□□□ 0.86
HOXA9-201ENST00000343483 APBA1Q02410 837 aa20.4■□□□□ 0.86
HOXA9-201ENST00000343483 SP4Q02446 784 aa20.4■□□□□ 0.86
HOXA9-201ENST00000343483 TUBB2AQ13885 445 aa20.4■□□□□ 0.86
HOXA9-201ENST00000343483 PLA2G4FQ68DD2 849 aa20.4■□□□□ 0.86
HOXA9-201ENST00000343483 KIAA1328Q86T90 577 aa20.4■□□□□ 0.86
HOXA9-201ENST00000343483 GPR161Q8N6U8 529 aaKnown RBP20.4■□□□□ 0.86
HOXA9-201ENST00000343483 SMC1BQ8NDV3 1235 aa20.4■□□□□ 0.86
HOXA9-201ENST00000343483 CHST13Q8NET6 341 aa20.4■□□□□ 0.86
HOXA9-201ENST00000343483 TUBB2BQ9BVA1 445 aa20.4■□□□□ 0.86
HOXA9-201ENST00000343483 EPC1Q9H2F5 836 aa20.4■□□□□ 0.86
HOXA9-201ENST00000343483 METTL14Q9HCE5 456 aaKnown RBP20.4■□□□□ 0.86
HOXA9-201ENST00000343483 PRDM10Q9NQV6 1147 aa20.4■□□□□ 0.86
HOXA9-201ENST00000343483 BTBD7Q9P203 1132 aa20.4■□□□□ 0.86
HOXA9-201ENST00000343483 CEP72Q9P209 647 aa20.4■□□□□ 0.86
HOXA9-201ENST00000343483 TRIM10Q9UDY6 481 aa20.4■□□□□ 0.86
HOXA9-201ENST00000343483 PCDHA10Q9Y5I2 948 aa20.4■□□□□ 0.86
HOXA9-201ENST00000343483 NOL4O94818 638 aa20.39■□□□□ 0.86
HOXA9-201ENST00000343483 AFPP02771 609 aaKnown RBP20.39■□□□□ 0.86
HOXA9-201ENST00000343483 POLR2FP61218 127 aaKnown RBP20.39■□□□□ 0.86
HOXA9-201ENST00000343483 PPATQ06203 517 aa20.39■□□□□ 0.86
HOXA9-201ENST00000343483 GNPTABQ3T906 1256 aa20.39■□□□□ 0.86
HOXA9-201ENST00000343483 XKR9Q5GH70 373 aa20.39■□□□□ 0.86
HOXA9-201ENST00000343483 PDXDC1Q6P996 788 aa20.39■□□□□ 0.86
HOXA9-201ENST00000343483 ANKRD13AQ8IZ07 590 aa20.39■□□□□ 0.86
HOXA9-201ENST00000343483 SYCP3Q8IZU3 236 aa20.39■□□□□ 0.86
HOXA9-201ENST00000343483 EDEM3Q9BZQ6 932 aa20.39■□□□□ 0.86
HOXA9-201ENST00000343483 GBP3Q9H0R5 595 aa20.39■□□□□ 0.86
HOXA9-201ENST00000343483 ARHGAP20Q9P2F6 1191 aa20.39■□□□□ 0.86
HOXA9-201ENST00000343483 GUCA1BQ9UMX6 200 aa20.39■□□□□ 0.86
HOXA9-201ENST00000343483 TFR2Q9UP52 801 aa20.39■□□□□ 0.86
HOXA9-201ENST00000343483 EIF3CLB5ME19 914 aaKnown RBP20.39■□□□□ 0.85
HOXA9-201ENST00000343483 SORBS3O60504 671 aa20.39■□□□□ 0.85
HOXA9-201ENST00000343483 NPEPPSP55786 919 aa20.39■□□□□ 0.85
HOXA9-201ENST00000343483 IRX3P78415 501 aaPredicted RBP20.39■□□□□ 0.85
HOXA9-201ENST00000343483 CNTN2Q02246 1040 aa20.39■□□□□ 0.85
HOXA9-201ENST00000343483 TMCO3Q6UWJ1 677 aa20.39■□□□□ 0.85
HOXA9-201ENST00000343483 SRGAP1Q7Z6B7 1085 aa20.39■□□□□ 0.85
HOXA9-201ENST00000343483 ERO1BQ86YB8 467 aa20.39■□□□□ 0.85
HOXA9-201ENST00000343483 CEP112Q8N8E3 955 aa20.39■□□□□ 0.85
HOXA9-201ENST00000343483 RDM1Q8NG50 284 aa20.39■□□□□ 0.85
HOXA9-201ENST00000343483 RABGGTAQ92696 567 aa20.39■□□□□ 0.85
HOXA9-201ENST00000343483 CDHR1Q96JP9 859 aa20.39■□□□□ 0.85
HOXA9-201ENST00000343483 EIF3CQ99613 913 aaKnown RBP20.39■□□□□ 0.85
HOXA9-201ENST00000343483 HAUS4Q9H6D7 363 aa20.39■□□□□ 0.85
HOXA9-201ENST00000343483 JPH1Q9HDC5 661 aaPredicted RBP20.39■□□□□ 0.85
HOXA9-201ENST00000343483 AGPAT3Q9NRZ7 376 aa20.39■□□□□ 0.85
HOXA9-201ENST00000343483 A0A0G2JLL6 359 aaPredicted RBP20.38■□□□□ 0.85
HOXA9-201ENST00000343483 ITGBL1O95965 494 aaPredicted RBP20.38■□□□□ 0.85
HOXA9-201ENST00000343483 CYP2J2P51589 502 aa20.38■□□□□ 0.85
HOXA9-201ENST00000343483 CHMP4BP1P59074 171 aa20.38■□□□□ 0.85
HOXA9-201ENST00000343483 CYP27A1Q02318 531 aa20.38■□□□□ 0.85
HOXA9-201ENST00000343483 PRRT2Q7Z6L0 340 aaPredicted RBP20.38■□□□□ 0.85
HOXA9-201ENST00000343483 FAM186BQ8IYM0 893 aa20.38■□□□□ 0.85
HOXA9-201ENST00000343483 KRT222Q8N1A0 295 aa20.38■□□□□ 0.85
HOXA9-201ENST00000343483 SENP7Q9BQF6 1050 aa20.38■□□□□ 0.85
HOXA9-201ENST00000343483 DEF6Q9H4E7 631 aa20.38■□□□□ 0.85
HOXA9-201ENST00000343483 GABBR1Q9UBS5 961 aa20.38■□□□□ 0.85
HOXA9-201ENST00000343483 OTOFQ9HC10 1997 aa20.38■□□□□ 0.85
HOXA9-201ENST00000343483 STAM2O75886 525 aa20.38■□□□□ 0.85
HOXA9-201ENST00000343483 PLS3P13797 630 aa20.38■□□□□ 0.85
HOXA9-201ENST00000343483 PSMC2P35998 433 aaKnown RBP20.38■□□□□ 0.85
HOXA9-201ENST00000343483 BMS1Q14692 1282 aaKnown RBP20.38■□□□□ 0.85
HOXA9-201ENST00000343483 CCDC122Q5T0U0 273 aa20.38■□□□□ 0.85
HOXA9-201ENST00000343483 PROCA1Q8NCQ7 364 aaPredicted RBP20.38■□□□□ 0.85
HOXA9-201ENST00000343483 DRC1Q96MC2 740 aa20.38■□□□□ 0.85
HOXA9-201ENST00000343483 PAGR1Q9BTK6 254 aa20.38■□□□□ 0.85
HOXA9-201ENST00000343483 GPRC5CQ9NQ84 441 aa20.38■□□□□ 0.85
HOXA9-201ENST00000343483 PUF60Q9UHX1 559 aaKnown RBP20.38■□□□□ 0.85
HOXA9-201ENST00000343483 PPP1R37O75864 691 aa20.37■□□□□ 0.85
HOXA9-201ENST00000343483 EIF4A3P38919 411 aaKnown RBP20.37■□□□□ 0.85
HOXA9-201ENST00000343483 SPA17Q15506 151 aa20.37■□□□□ 0.85
HOXA9-201ENST00000343483 NFIL3Q16649 462 aa20.37■□□□□ 0.85
HOXA9-201ENST00000343483 NCAPG2Q86XI2 1143 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms